Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o18
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49821 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 223 2e-57
UniRef50_A1ZAW7 Cluster: CG11423-PA; n=2; Drosophila melanogaste... 208 4e-53
UniRef50_A1Z9Z7 Cluster: CG8102-PA, isoform A; n=4; Sophophora|R... 154 1e-36
UniRef50_Q7XZ61 Cluster: NADH dehydrogenase; n=1; Griffithsia ja... 145 6e-34
UniRef50_Q4UKA6 Cluster: NADH-quinone oxidoreductase subunit F; ... 139 4e-32
UniRef50_Q1IS37 Cluster: NADH-quinone oxidoreductase, F subunit;... 97 2e-19
UniRef50_Q56222 Cluster: NADH-quinone oxidoreductase subunit 1; ... 96 5e-19
UniRef50_P56913 Cluster: NADH-quinone oxidoreductase subunit F 2... 95 1e-18
UniRef50_A2DV30 Cluster: Respiratory-chain NADH dehydrogenase 51... 94 1e-18
UniRef50_Q9WY70 Cluster: NADP-reducing hydrogenase, subunit C; n... 92 6e-18
UniRef50_Q9XAQ9 Cluster: NADH-quinone oxidoreductase subunit F; ... 91 1e-17
UniRef50_Q8F7Q4 Cluster: NADH dehydrogenase I, F subunit; n=9; B... 90 3e-17
UniRef50_A6FCN1 Cluster: NuoF2 NADH I CHAIN F; n=1; Moritella sp... 89 4e-17
UniRef50_Q1IZW8 Cluster: NADH-quinone oxidoreductase, F subunit;... 89 6e-17
UniRef50_A7CUG0 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba... 89 6e-17
UniRef50_Q2S5I8 Cluster: Respiratory-chain NADH dehydrogenase 51... 89 7e-17
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 89 7e-17
UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F; ... 88 1e-16
UniRef50_Q8RBC9 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 84 2e-15
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 83 5e-15
UniRef50_A4MHV7 Cluster: NADH dehydrogenase; n=5; Bacteria|Rep: ... 83 5e-15
UniRef50_A5FSK8 Cluster: NADH dehydrogenase; n=3; Dehalococcoide... 81 1e-14
UniRef50_Q2LYA9 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 81 2e-14
UniRef50_Q8ABI5 Cluster: NADH:ubiquinone oxidoreductase subunit;... 80 3e-14
UniRef50_Q6AQG1 Cluster: Probable NADP-reducing hydrogenase, 51 ... 80 3e-14
UniRef50_Q2C5T6 Cluster: NADH dehydrogenase I, F subunit; n=2; V... 80 3e-14
UniRef50_Q2AG83 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding:... 80 3e-14
UniRef50_A1ALP4 Cluster: NADH dehydrogenase; n=1; Pelobacter pro... 80 3e-14
UniRef50_Q2AFM4 Cluster: Respiratory-chain NADH dehydrogenase do... 79 6e-14
UniRef50_Q6MDR1 Cluster: Probable NADH-ubiquinone oxidoreductase... 78 1e-13
UniRef50_P74024 Cluster: Hydrogenase subunit; n=13; Bacteria|Rep... 78 1e-13
UniRef50_O27592 Cluster: NADP-reducing hydrogenase, subunit C; n... 77 2e-13
UniRef50_A5UVG4 Cluster: NADH-quinone oxidoreductase, F subunit;... 76 4e-13
UniRef50_Q9I0J7 Cluster: NADH-quinone oxidoreductase subunit F; ... 76 6e-13
UniRef50_Q4AEJ7 Cluster: Hydrogen dehydrogenase; n=1; Chlorobium... 75 1e-12
UniRef50_Q3A639 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 75 1e-12
UniRef50_O66841 Cluster: NADH-quinone oxidoreductase subunit F; ... 74 2e-12
UniRef50_A6PMG7 Cluster: NADH dehydrogenase (Quinone) precursor;... 73 4e-12
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 73 5e-12
UniRef50_A5FXJ6 Cluster: NADH dehydrogenase; n=1; Acidiphilium c... 72 9e-12
UniRef50_Q7WMR8 Cluster: NAD-dependent formate dehydrogenase bet... 71 1e-11
UniRef50_A0RMD3 Cluster: NADH-quinone oxidoreductase chain f; n=... 71 2e-11
UniRef50_Q746S7 Cluster: NADH dehydrogenase I, F subunit; n=7; D... 71 2e-11
UniRef50_Q1PZQ6 Cluster: Similar to NADH dehydrogenase I chain F... 71 2e-11
UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 69 6e-11
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 69 8e-11
UniRef50_Q6N1Z2 Cluster: NADH-ubiquinone dehydrogenase chain F; ... 67 2e-10
UniRef50_Q835I8 Cluster: NAD-dependent formate dehydrogenase, be... 67 3e-10
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 66 4e-10
UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7; Bacteria... 65 8e-10
UniRef50_Q1V283 Cluster: NAD-dependent formate dehydrogenase bet... 65 8e-10
UniRef50_A1HDX5 Cluster: NADH dehydrogenase; n=4; Ralstonia pick... 65 1e-09
UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 65 1e-09
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 64 1e-09
UniRef50_A7IMB3 Cluster: NADH dehydrogenase; n=3; Proteobacteria... 64 1e-09
UniRef50_A3EW61 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 64 1e-09
UniRef50_UPI0000384AE3 Cluster: COG1894: NADH:ubiquinone oxidore... 62 1e-08
UniRef50_O94500 Cluster: Iron sulfur cluster assembly protein; n... 60 2e-08
UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit... 58 9e-08
UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n... 58 1e-07
UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep: Hydro... 56 4e-07
UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2; Actinomycetale... 53 3e-06
UniRef50_Q67JR5 Cluster: NADH dehydrogenase subunit; n=1; Symbio... 51 2e-05
UniRef50_A3Q2V2 Cluster: Respiratory-chain NADH dehydrogenase do... 47 2e-04
UniRef50_A5X3H0 Cluster: HtxX; n=1; Xanthobacter flavus|Rep: Htx... 46 7e-04
UniRef50_Q896I5 Cluster: RnfC/nqrF; n=18; Clostridiales|Rep: Rnf... 43 0.004
UniRef50_Q44SY7 Cluster: Electron transport complex, RnfABCDGE t... 43 0.004
UniRef50_Q0EPY6 Cluster: Electron transport complex, RnfABCDGE t... 42 0.008
UniRef50_Q51696 Cluster: Putative uncharacterized protein ORF2; ... 42 0.011
UniRef50_A1SNE6 Cluster: Respiratory-chain NADH dehydrogenase do... 42 0.011
UniRef50_Q21I18 Cluster: Electron transport complex, RnfABCDGE t... 41 0.019
UniRef50_A7G5W1 Cluster: NADH dehydrogenase family protein; n=4;... 40 0.034
UniRef50_Q92CR5 Cluster: Lin1106 protein; n=13; Listeria|Rep: Li... 40 0.045
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 40 0.045
UniRef50_Q0AAG9 Cluster: Electron transport complex, RnfABCDGE t... 40 0.045
UniRef50_A1SQ39 Cluster: Respiratory-chain NADH dehydrogenase do... 40 0.045
UniRef50_A0LLS5 Cluster: Electron transport complex, RnfABCDGE t... 40 0.045
UniRef50_Q0VP39 Cluster: Electron transport complex protein rnfC... 39 0.059
UniRef50_Q73PG1 Cluster: Na(+)-translocating NADH-quinone reduct... 39 0.078
UniRef50_Q2SKU6 Cluster: Predicted NADH:ubiquinone oxidoreductas... 39 0.078
UniRef50_A7BY78 Cluster: Electron transport complex protein rnfC... 39 0.078
UniRef50_A3DI53 Cluster: Electron transport complex, RnfABCDGE t... 38 0.18
UniRef50_A5N6H2 Cluster: RnfC related NADH dehydrogenase; n=2; C... 37 0.24
UniRef50_Q67R12 Cluster: Na+-transporting NADH-quinone reductase... 37 0.31
UniRef50_Q482U5 Cluster: Electron transport complex, RnfABCDGE t... 37 0.31
UniRef50_Q1EUM7 Cluster: Respiratory-chain NADH dehydrogenase do... 37 0.31
UniRef50_Q5FP48 Cluster: Outer membrane protein; n=2; Gluconobac... 36 0.41
UniRef50_A4CB98 Cluster: Electron transport complex protein RnfC... 36 0.41
UniRef50_Q9KT88 Cluster: Electron transport complex protein rnfC... 36 0.41
UniRef50_A7QGL6 Cluster: Chromosome chr12 scaffold_93, whole gen... 36 0.55
UniRef50_Q3YL96 Cluster: CdiA; n=3; Escherichia coli|Rep: CdiA -... 35 0.96
UniRef50_A4B3H4 Cluster: Electron transport complex protein RnfC... 35 0.96
UniRef50_Q9ACZ1 Cluster: Putative oxidoreductase; n=3; Streptomy... 35 1.3
UniRef50_A6FIW1 Cluster: Electron transport complex protein RnfC... 35 1.3
UniRef50_A1AVH8 Cluster: Electron transport complex, RnfABCDGE t... 35 1.3
UniRef50_Q31GU4 Cluster: NADH oxidoreductase, RnfABCDGE type, C ... 34 1.7
UniRef50_A6TJY1 Cluster: Respiratory-chain NADH dehydrogenase do... 34 1.7
UniRef50_A6PV28 Cluster: Respiratory-chain NADH dehydrogenase do... 34 1.7
UniRef50_A6PDB0 Cluster: Electron transport complex, RnfABCDGE t... 34 1.7
UniRef50_A0JX02 Cluster: Peptidase S9, prolyl oligopeptidase act... 34 1.7
UniRef50_Q8AA47 Cluster: Na+-transporting NADH:ubiquinone oxidor... 34 2.2
UniRef50_Q82NN9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q1ZEG2 Cluster: Electron transport complex protein RnfC... 34 2.2
UniRef50_Q1AWR7 Cluster: Respiratory-chain NADH dehydrogenase do... 34 2.2
UniRef50_A6TUS7 Cluster: Respiratory-chain NADH dehydrogenase do... 34 2.2
UniRef50_Q6LTT0 Cluster: Hypothetical type I restriction-modific... 33 2.9
UniRef50_Q2BP71 Cluster: Electron transport complex protein RnfC... 33 2.9
UniRef50_Q9HYB8 Cluster: Electron transport complex protein rnfC... 33 2.9
UniRef50_A1WT48 Cluster: Electron transport complex, RnfABCDGE t... 33 3.9
UniRef50_A4RDW7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q8RIJ6 Cluster: Nitrogen fixation iron-sulphur protein ... 33 5.1
UniRef50_Q1N6T4 Cluster: Electron transport complex protein RnfC... 33 5.1
UniRef50_A4W4W3 Cluster: Filamentous haemagglutinin family outer... 33 5.1
UniRef50_Q9CNP2 Cluster: Electron transport complex protein rnfC... 33 5.1
UniRef50_UPI0000E87BCA Cluster: predicted NADH:ubiquinone oxidor... 32 6.8
UniRef50_UPI0000E489C4 Cluster: PREDICTED: hypothetical protein;... 32 6.8
UniRef50_Q4S2P1 Cluster: Chromosome 17 SCAF14760, whole genome s... 32 6.8
UniRef50_Q9WY86 Cluster: Electron transport complex protein, put... 32 6.8
UniRef50_A6NT39 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q384F1 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A4RAI3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_UPI0000F2C377 Cluster: PREDICTED: similar to estradiol-... 32 8.9
UniRef50_Q3A7W8 Cluster: Predicted NADH:ubiquinone oxidoreductas... 32 8.9
UniRef50_A6NTM2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A6BIN7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A5N7M5 Cluster: RnfC; n=1; Clostridium kluyveri DSM 555... 32 8.9
UniRef50_A1SSX3 Cluster: Electron transport complex, RnfABCDGE t... 32 8.9
UniRef50_A1I872 Cluster: Electron transport complex, RnfABCDGE t... 32 8.9
>UniRef50_P49821 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial precursor; n=215; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial precursor - Homo sapiens
(Human)
Length = 464
Score = 223 bits (544), Expect = 2e-57
Identities = 98/123 (79%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Frame = +1
Query: 151 VPVRFQ-QTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDW 327
V VRF T AP K +G L D DR+FTNLYGRH+WRLKG+L+RGDWY TKEILLKG DW
Sbjct: 16 VSVRFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDW 75
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
I+ E+KTSGLRGRGGAGFPTG+KWSFMNKPSDGRPKYLVVNAD GEPGTCKDREI+R DP
Sbjct: 76 ILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDP 135
Query: 508 HKL 516
HKL
Sbjct: 136 HKL 138
>UniRef50_A1ZAW7 Cluster: CG11423-PA; n=2; Drosophila
melanogaster|Rep: CG11423-PA - Drosophila melanogaster
(Fruit fly)
Length = 702
Score = 208 bits (509), Expect = 4e-53
Identities = 88/111 (79%), Positives = 100/111 (90%)
Frame = +1
Query: 184 SKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRG 363
+K +GPLAD+DR+FTNLYGRH+WRLK A+ RGDWY TKEI+ KG WIVNE+KTSGLRG
Sbjct: 251 TKTTFGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLRG 310
Query: 364 RGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
RGGAGFP+G+KWSFM+KP DGRPK+LVVNAD GEPGTCKDREIMR DPHKL
Sbjct: 311 RGGAGFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKL 361
>UniRef50_A1Z9Z7 Cluster: CG8102-PA, isoform A; n=4; Sophophora|Rep:
CG8102-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 481
Score = 154 bits (374), Expect = 1e-36
Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
Frame = +1
Query: 187 KDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGR 366
K K+GPL D DRVF NLYGRH+WRL GA RGDW+ T E+L +G +WI+ ++ SGLRGR
Sbjct: 52 KTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQVSKSGLRGR 111
Query: 367 GGAGFPTGMKWSFMNK-PSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
GGAGF G+KW F+ + S+ PK ++VN GEPGTCKDR+I+R +PHKL
Sbjct: 112 GGAGFYAGLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKL 162
>UniRef50_Q7XZ61 Cluster: NADH dehydrogenase; n=1; Griffithsia
japonica|Rep: NADH dehydrogenase - Griffithsia japonica
(Red alga)
Length = 170
Score = 145 bits (351), Expect = 6e-34
Identities = 66/109 (60%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Frame = +1
Query: 196 YGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGA 375
+G L+D DR+FTNLY +WRLKGA+ RGDW++TK+++ G WI++E+K R GA
Sbjct: 54 HGGLSDKDRIFTNLYRDGDWRLKGAMKRGDWHMTKDLVQMGRSWILSEIKAVRPARRAGA 113
Query: 376 -GFPTGMKWSFMNKPS-DGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
GFP+G+K+SFM S DGRP YLVVNAD EPGTCKDREI+R DPHKL
Sbjct: 114 PGFPSGLKYSFMPDGSPDGRPNYLVVNADESEPGTCKDREILRSDPHKL 162
>UniRef50_Q4UKA6 Cluster: NADH-quinone oxidoreductase subunit F;
n=11; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit F - Rickettsia felis (Rickettsia azadi)
Length = 422
Score = 139 bits (336), Expect = 4e-32
Identities = 64/104 (61%), Positives = 79/104 (75%)
Frame = +1
Query: 205 LADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFP 384
L + D++FTNL+G+ LK + RGDW TK +L KG ++I+ E+K SGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWDNTKALLDKGREFIIEEVKKSGLRGRGGAGFS 61
Query: 385 TGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
TGMKWSFM K S +P YLVVNAD EPGTCKDR+I+R +PHKL
Sbjct: 62 TGMKWSFMPKNS-AKPCYLVVNADESEPGTCKDRDILRFEPHKL 104
>UniRef50_Q1IS37 Cluster: NADH-quinone oxidoreductase, F subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, F
subunit - Acidobacteria bacterium (strain Ellin345)
Length = 439
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/100 (46%), Positives = 62/100 (62%)
Frame = +1
Query: 211 DSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTG 390
D +V ++ +G+ + L + ++ L D I+NE+K S LRGRGGAGFPTG
Sbjct: 9 DEVKVISSRWGKGATDIDRYLELDGYKAVQKALTMTPDAIINEVKASNLRGRGGAGFPTG 68
Query: 391 MKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPH 510
+KWSF+ K S +PKY++ N D EPGTCKDR I DPH
Sbjct: 69 LKWSFVPKES-AKPKYILCNGDESEPGTCKDRLIFEHDPH 107
>UniRef50_Q56222 Cluster: NADH-quinone oxidoreductase subunit 1;
n=6; Bacteria|Rep: NADH-quinone oxidoreductase subunit 1
- Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579)
Length = 438
Score = 95.9 bits (228), Expect = 5e-19
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 WRLKGALARGDWYLTKEILLKGT-DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGR 429
W L L G + K +L + T D ++ E+K SGLRGRGGAGFPTG+KWSFM K DG+
Sbjct: 27 WTLDYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGFPTGLKWSFMPK-DDGK 85
Query: 430 PKYLVVNADXGEPGTCKDREIMRXDPHKL 516
YL+ NAD EPG+ KDR I+ PH L
Sbjct: 86 QHYLICNADESEPGSFKDRYILEDVPHLL 114
>UniRef50_P56913 Cluster: NADH-quinone oxidoreductase subunit F 2;
n=100; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit F 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 421
Score = 94.7 bits (225), Expect = 1e-18
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRX 501
D IV +K S LRGRGGAGFPTGMKWSF+ K + G+PKYL NAD GEPGT KDR IM
Sbjct: 40 DEIVELVKESNLRGRGGAGFPTGMKWSFVPKAA-GKPKYLCCNADEGEPGTFKDRIIMER 98
Query: 502 DPHKL 516
DPH+L
Sbjct: 99 DPHQL 103
>UniRef50_A2DV30 Cluster: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family protein; n=1; Trichomonas vaginalis
G3|Rep: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family protein - Trichomonas vaginalis G3
Length = 425
Score = 94.3 bits (224), Expect = 1e-18
Identities = 44/100 (44%), Positives = 64/100 (64%)
Frame = +1
Query: 217 DRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMK 396
DR+FTN+ G E L+ + RGDW T++I+ G +I++E++ S LRGR GAG T K
Sbjct: 15 DRIFTNINGVDESDLQSCMKRGDWNDTQKIIANGKKYILDEVRKSELRGRSGAGLLTYKK 74
Query: 397 WSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
W + S P YL +N + EPGTCKDR+I++ +P K+
Sbjct: 75 WEEI-LTSKQLPHYLCINGNESEPGTCKDRQILQNEPQKI 113
>UniRef50_Q9WY70 Cluster: NADP-reducing hydrogenase, subunit C; n=9;
Bacteria|Rep: NADP-reducing hydrogenase, subunit C -
Thermotoga maritima
Length = 545
Score = 92.3 bits (219), Expect = 6e-18
Identities = 45/87 (51%), Positives = 57/87 (65%)
Frame = +1
Query: 256 RLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPK 435
R++ +AR ++ + L I+ E+K SGLRGRGGAGFPTG+KW F K S + K
Sbjct: 124 RIEEYIARDGYFALAKALQMEPGEIIEEIKRSGLRGRGGAGFPTGLKWEFTYKASADQ-K 182
Query: 436 YLVVNADXGEPGTCKDREIMRXDPHKL 516
Y++ NAD GEPGT KDR IM DPH L
Sbjct: 183 YVLCNADEGEPGTFKDRLIMEGDPHSL 209
>UniRef50_Q9XAQ9 Cluster: NADH-quinone oxidoreductase subunit F;
n=32; Bacteria|Rep: NADH-quinone oxidoreductase subunit
F - Streptomyces coelicolor
Length = 449
Score = 91.1 bits (216), Expect = 1e-17
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +1
Query: 298 KEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTC 477
++ L D ++ +K SGLRGRGGAGFPTGMKW F+ + DG+P YLVVNAD EPGTC
Sbjct: 46 RKALAMAPDDLIAYVKESGLRGRGGAGFPTGMKWQFIPQ-GDGKPHYLVVNADESEPGTC 104
Query: 478 KDREIMRXDPHKL 516
KD ++ +PH L
Sbjct: 105 KDIPLLFANPHSL 117
>UniRef50_Q8F7Q4 Cluster: NADH dehydrogenase I, F subunit; n=9;
Bacteria|Rep: NADH dehydrogenase I, F subunit -
Leptospira interrogans
Length = 443
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +1
Query: 298 KEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTC 477
K+ L D I+ E+K SGLRGRGGAGFPTG+KWSF+ K +PKY++ NAD GEPGT
Sbjct: 32 KKALQMKPDDIIAEVKKSGLRGRGGAGFPTGLKWSFIPKDIP-KPKYIICNADEGEPGTF 90
Query: 478 KDREIMRXDPHKL 516
KDR+++ PH++
Sbjct: 91 KDRKLIENLPHQI 103
>UniRef50_A6FCN1 Cluster: NuoF2 NADH I CHAIN F; n=1; Moritella sp.
PE36|Rep: NuoF2 NADH I CHAIN F - Moritella sp. PE36
Length = 425
Score = 89.4 bits (212), Expect = 4e-17
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +1
Query: 292 LTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPG 471
L K + D +++ +K S LRGRGGAGFPTG+KWSF+ K DG+ YL NAD GEPG
Sbjct: 30 LKKILTTYSPDKVIDAVKASNLRGRGGAGFPTGLKWSFVPK-DDGKIHYLCCNADEGEPG 88
Query: 472 TCKDREIMRXDPHKL 516
T KDR +M DPH++
Sbjct: 89 TFKDRLLMERDPHRV 103
>UniRef50_Q1IZW8 Cluster: NADH-quinone oxidoreductase, F subunit;
n=1; Deinococcus geothermalis DSM 11300|Rep:
NADH-quinone oxidoreductase, F subunit - Deinococcus
geothermalis (strain DSM 11300)
Length = 446
Score = 89.0 bits (211), Expect = 6e-17
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +1
Query: 253 WRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRP 432
W L L G + + D ++ E+K SGLRGRGGAGF TG+KWSFM +DG+
Sbjct: 33 WTLDFYLRHGGYQGVRRAFALRPDAVIEEVKKSGLRGRGGAGFATGLKWSFM-PLNDGKQ 91
Query: 433 KYLVVNADXGEPGTCKDREIMRXDPHKL 516
Y++ NAD EPG+ KDR ++ DPH+L
Sbjct: 92 HYIICNADESEPGSFKDRYLLSEDPHQL 119
>UniRef50_A7CUG0 Cluster: NADH dehydrogenase; n=1; Opitutaceae
bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
bacterium TAV2
Length = 478
Score = 89.0 bits (211), Expect = 6e-17
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +1
Query: 271 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVN 450
L G + + K + + + + +E+K SG+RGRGGAGFP G+KW +++ S G+P YL+VN
Sbjct: 41 LRNGGYEILKRAVARKPEDLRDEVKKSGIRGRGGAGFPCGVKWGLVDRKS-GKPIYLIVN 99
Query: 451 ADXGEPGTCKDREIMRXDPHKL 516
AD EPGT KDR I+ DPH+L
Sbjct: 100 ADESEPGTFKDRYIIHQDPHQL 121
>UniRef50_Q2S5I8 Cluster: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family; n=2; Sphingobacteriales genera incertae
sedis|Rep: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family - Salinibacter ruber (strain DSM 13855)
Length = 464
Score = 88.6 bits (210), Expect = 7e-17
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+ +E+K SGL GRGGAGFPTG+KW+FM +P D RP+++ VNAD EPGT KDR++M +P
Sbjct: 68 VTDEVKASGLTGRGGAGFPTGIKWTFMPEP-DERPRFIGVNADESEPGTFKDRQVMEYNP 126
Query: 508 H 510
H
Sbjct: 127 H 127
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 88.6 bits (210), Expect = 7e-17
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
I+ E+K + LRGRGGAGFP G+KW F+ K +D +P YL+ NAD GEPGT KDR+IM DP
Sbjct: 211 ILEEVKKANLRGRGGAGFPAGVKWGFIPKDTD-KPVYLICNADEGEPGTYKDRQIMEYDP 269
Query: 508 HKL 516
H L
Sbjct: 270 HLL 272
>UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F;
n=1; Plesiocystis pacifica SIR-1|Rep: Putative NADH
dehydrogenase I chain F - Plesiocystis pacifica SIR-1
Length = 503
Score = 88.2 bits (209), Expect = 1e-16
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +1
Query: 313 KGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREI 492
+G DWI+ ++KTSGL+GRGGAGFP +KW + ++ +Y+VVNAD GEPGT KDREI
Sbjct: 143 EGPDWIIEQLKTSGLQGRGGAGFPAHIKWHAVRTQAE-LTRYVVVNADEGEPGTFKDREI 201
Query: 493 MRXDPHKL 516
M PH++
Sbjct: 202 MLRRPHRM 209
>UniRef50_Q8RBC9 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=11; Bacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Thermoanaerobacter tengcongensis
Length = 596
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 259 LKGALARGDWYLTKEILLKGT-DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPK 435
++ A+A + ++L + T + ++ E+K SGLRGRGG GFPTG+KW F K + PK
Sbjct: 130 IREAIAFDGYKALAKVLTEMTPEQVIEEVKKSGLRGRGGGGFPTGVKWEFAYKQKE-TPK 188
Query: 436 YLVVNADXGEPGTCKDREIMRXDPHKL 516
Y+V NAD G+PG DR I+ DPH +
Sbjct: 189 YVVCNADEGDPGAFMDRSILEGDPHSV 215
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 82.6 bits (195), Expect = 5e-15
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 271 LARGDWYLTKEILLK-GTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVV 447
L +G + K+ L + D ++ +K SGLRGRGGAGFP G+KWSF+ P KY++
Sbjct: 229 LEKGGYAAIKKALAEYQPDDVIAIVKDSGLRGRGGAGFPAGVKWSFL--PKGDMQKYVIC 286
Query: 448 NADXGEPGTCKDREIMRXDPHKL 516
NAD GEPGT KDR +M +PH L
Sbjct: 287 NADEGEPGTYKDRILMEENPHGL 309
>UniRef50_A4MHV7 Cluster: NADH dehydrogenase; n=5; Bacteria|Rep:
NADH dehydrogenase - Geobacter bemidjiensis Bem
Length = 593
Score = 82.6 bits (195), Expect = 5e-15
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+++E+K SGLRGRGG GFPTGMKWSF S G KYL+ NAD G+PG DR I+ DP
Sbjct: 153 VIDEVKKSGLRGRGGGGFPTGMKWSFC-AASPGNHKYLICNADEGDPGAFMDRSILEGDP 211
Query: 508 H 510
+
Sbjct: 212 Y 212
>UniRef50_A5FSK8 Cluster: NADH dehydrogenase; n=3;
Dehalococcoides|Rep: NADH dehydrogenase -
Dehalococcoides sp. BAV1
Length = 417
Score = 81.0 bits (191), Expect = 1e-14
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = +1
Query: 271 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVN 450
LA G + K+ L + ++ E+K S L GRGGA FPTG+KW K PKY+V N
Sbjct: 23 LADGGYQALKKALSMTPEEVIAEVKRSKLVGRGGAAFPTGLKWELTRKEK-ANPKYIVCN 81
Query: 451 ADXGEPGTCKDREIMRXDPH 510
A GEPGT KDR I++ DPH
Sbjct: 82 ASEGEPGTFKDRLILKNDPH 101
>UniRef50_Q2LYA9 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding subunit; n=3; cellular organisms|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding subunit -
Syntrophus aciditrophicus (strain SB)
Length = 637
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 271 LARGDWY-LTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVV 447
+ARG + L K + + ++ E+KTSGLRGRGG GFPTG KW + ++G KY++
Sbjct: 175 IARGGYTALHKALTTMSPEDVILEVKTSGLRGRGGGGFPTGTKWESCRR-AEGEIKYVIC 233
Query: 448 NADXGEPGTCKDREIMRXDPHKL 516
N D G+PG DR +M DPH +
Sbjct: 234 NGDEGDPGAYMDRSLMEGDPHSV 256
>UniRef50_Q8ABI5 Cluster: NADH:ubiquinone oxidoreductase subunit;
n=91; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase subunit - Bacteroides thetaiotaomicron
Length = 635
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 271 LARGDWYLTKEILL-KGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVV 447
+AR ++ + LL K +++ +K SGLRGRGG GFPTG+KW F +K KY+V
Sbjct: 173 IAREGYFALADCLLNKQPADVIDIIKRSGLRGRGGGGFPTGLKWEFASK-QVSNVKYVVC 231
Query: 448 NADXGEPGTCKDREIMRXDPHKL 516
NAD G+PG DR IM DPH +
Sbjct: 232 NADEGDPGAFMDRSIMEGDPHSI 254
>UniRef50_Q6AQG1 Cluster: Probable NADP-reducing hydrogenase, 51 kDa
subunit; n=1; Desulfotalea psychrophila|Rep: Probable
NADP-reducing hydrogenase, 51 kDa subunit - Desulfotalea
psychrophila
Length = 634
Score = 80.2 bits (189), Expect = 3e-14
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 283 DWYLTKE-ILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADX 459
D YL E L +G D ++ E+K S LRGRGG GFP KW K + G PKY+V NAD
Sbjct: 166 DGYLALEKSLQEGPDMVLTEIKKSALRGRGGGGFPAARKWEAGRKAT-GHPKYVVCNADE 224
Query: 460 GEPGTCKDREIMRXDPH 510
G+PG DR ++ DPH
Sbjct: 225 GDPGAFMDRSVLEGDPH 241
>UniRef50_Q2C5T6 Cluster: NADH dehydrogenase I, F subunit; n=2;
Vibrionaceae|Rep: NADH dehydrogenase I, F subunit -
Photobacterium sp. SKA34
Length = 427
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +1
Query: 280 GDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADX 459
G + I+ + + ++ E+K SGLRG GG GFPTG+KW F+ K + P YLVVN D
Sbjct: 24 GGYQSLNSIIGQPREPLLAELKASGLRGCGGGGFPTGVKWGFLAKDA-SHPVYLVVNLDE 82
Query: 460 GEPGTCKDREIMRXDPHKL 516
EPG+ KDR+++ DPH +
Sbjct: 83 SEPGSFKDRQVLYRDPHTI 101
>UniRef50_Q2AG83 Cluster: 4Fe-4S ferredoxin, iron-sulfur
binding:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=4; Bacteria|Rep: 4Fe-4S ferredoxin,
iron-sulfur binding:Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit - Halothermothrix orenii H 168
Length = 632
Score = 79.8 bits (188), Expect = 3e-14
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 175 QAPSKDKYGPL-ADSDRVFTNLYGRHEWR-LKGALARGDWY-LTKEILLKGTDWIVNEMK 345
+A S +K P A+ +R+ + G + L LA G + L+K +L + + E+
Sbjct: 136 EAYSNEKEIPFYANQNRIALSNCGNIDPEDLDDYLAHGGYKALSKALLEMSPEEVCKEVT 195
Query: 346 TSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
SGLRGRGG GFPTG KW F + + KY++VN D G+PG DR IM DPH++
Sbjct: 196 ESGLRGRGGGGFPTGKKWEFAYREKADQ-KYVIVNGDEGDPGAFMDRSIMEGDPHRV 251
>UniRef50_A1ALP4 Cluster: NADH dehydrogenase; n=1; Pelobacter
propionicus DSM 2379|Rep: NADH dehydrogenase -
Pelobacter propionicus (strain DSM 2379)
Length = 427
Score = 79.8 bits (188), Expect = 3e-14
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Frame = +1
Query: 214 SDRVFTNL-YGRHEWRLKGALARGDWYLTKEIL--LKGTDWIVNEMKTSGLRGRGGAGFP 384
S+R+F N LK RG + + L L+ D + E+ SGLRGRGGAGFP
Sbjct: 3 SERIFFNFPVTADSHTLKAYQGRGGYQALENALKTLQPID-VEKEVMASGLRGRGGAGFP 61
Query: 385 TGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
TG KWSF+NK + YL NAD GEPGT KDR I + H+L
Sbjct: 62 TGSKWSFVNKKAP--VVYLCCNADEGEPGTFKDRWIFEHNSHQL 103
>UniRef50_Q2AFM4 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=2; Bacteria|Rep:
Respiratory-chain NADH dehydrogenase domain, 51 kDa
subunit - Halothermothrix orenii H 168
Length = 408
Score = 79.0 bits (186), Expect = 6e-14
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
I+ E+K SGLRGRGGAGFPTG+KW K G KY++ N D GEPGT KDR ++ P
Sbjct: 34 IIEELKKSGLRGRGGAGFPTGLKWELALKEKAGE-KYIICNGDEGEPGTFKDRYLLENSP 92
Query: 508 HKL 516
K+
Sbjct: 93 LKV 95
>UniRef50_Q6MDR1 Cluster: Probable NADH-ubiquinone oxidoreductase
chain F; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Probable NADH-ubiquinone oxidoreductase chain
F - Protochlamydia amoebophila (strain UWE25)
Length = 432
Score = 77.8 bits (183), Expect = 1e-13
Identities = 39/75 (52%), Positives = 47/75 (62%)
Frame = +1
Query: 292 LTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPG 471
L K I +D ++ +K S LRGRGG GF TG+KWSF+ K KYLV N D EPG
Sbjct: 31 LKKAISSISSDQLIEMVKQSWLRGRGGGGFQTGLKWSFVPKDCQ-ISKYLVCNCDESEPG 89
Query: 472 TCKDREIMRXDPHKL 516
T KDR I+ DPH+L
Sbjct: 90 TFKDRYIIENDPHQL 104
>UniRef50_P74024 Cluster: Hydrogenase subunit; n=13; Bacteria|Rep:
Hydrogenase subunit - Synechocystis sp. (strain PCC
6803)
Length = 533
Score = 77.8 bits (183), Expect = 1e-13
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
++ EM SGLRGRGG G+PTG+KW+ + K G+ KY++ NAD G+PG DR ++ DP
Sbjct: 160 VIVEMNKSGLRGRGGGGYPTGLKWATVAK-MPGQQKYVICNADEGDPGAFMDRSVLESDP 218
Query: 508 HKL 516
H++
Sbjct: 219 HRI 221
>UniRef50_O27592 Cluster: NADP-reducing hydrogenase, subunit C; n=4;
cellular organisms|Rep: NADP-reducing hydrogenase,
subunit C - Methanobacterium thermoautotrophicum
Length = 630
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +1
Query: 271 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVN 450
LA G + L D ++ E+K SGLRGRGGAGFPT +KWS + + KYL+ N
Sbjct: 152 LATGGYRGLMRALEMEPDEVIEEVKDSGLRGRGGAGFPTWLKWSLCRQEA-SEVKYLICN 210
Query: 451 ADXGEPGTCKDREIMRXDPHKL 516
AD G+PG +R ++ DPH L
Sbjct: 211 ADEGDPGAFMNRSLIEGDPHAL 232
>UniRef50_A5UVG4 Cluster: NADH-quinone oxidoreductase, F subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, F
subunit - Roseiflexus sp. RS-1
Length = 449
Score = 76.2 bits (179), Expect = 4e-13
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
IV +K SGLRGRGGAGFPTG+KW F+ P P+YL+ N D EPGT + +I+ +P
Sbjct: 61 IVQTVKDSGLRGRGGAGFPTGVKWGFL--PKGVYPRYLLCNCDESEPGTFNNHQIIDRNP 118
Query: 508 HKL 516
H+L
Sbjct: 119 HQL 121
>UniRef50_Q9I0J7 Cluster: NADH-quinone oxidoreductase subunit F;
n=78; Bacteria|Rep: NADH-quinone oxidoreductase subunit
F - Pseudomonas aeruginosa
Length = 448
Score = 75.8 bits (178), Expect = 6e-13
Identities = 37/73 (50%), Positives = 44/73 (60%)
Frame = +1
Query: 298 KEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTC 477
K + D IV +K SGL+GRGGAGFPTG+KW M K +YL+ NAD EP T
Sbjct: 48 KALTQMAQDDIVQTVKDSGLKGRGGAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTW 107
Query: 478 KDREIMRXDPHKL 516
KDR +M PH L
Sbjct: 108 KDRMLMEQLPHLL 120
>UniRef50_Q4AEJ7 Cluster: Hydrogen dehydrogenase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Hydrogen dehydrogenase -
Chlorobium phaeobacteroides BS1
Length = 497
Score = 74.9 bits (176), Expect = 1e-12
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 RLKGALARGDWYL---TKEILLK-GTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSD 423
R KGAL D+ L KEIL + I++ + S +RGRGGAGFPTG+KW F ++ +
Sbjct: 116 RRKGALLNHDYPLFSVIKEILPNTSAEEIIDIVSESNIRGRGGAGFPTGLKWKFGSR-AK 174
Query: 424 GRPKYLVVNADXGEPGTCKDREIMRXDP 507
G ++++ NAD GEPGT KDR ++ P
Sbjct: 175 GERRFIICNADEGEPGTFKDRVLLTEYP 202
>UniRef50_Q3A639 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=1; Pelobacter
carbinolicus DSM 2380|Rep: NADH:ubiquinone
oxidoreductase, NADH-binding (51 kD) subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 571
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 298 KEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTC 477
K + ++ ++NE SGLRGRGGAGFP G+KW F + KY++ NAD G+PG
Sbjct: 183 KALTEMSSEEVINEAIGSGLRGRGGAGFPIGLKWKFAAAEKND-IKYILCNADEGDPGAF 241
Query: 478 KDREIMRXDPHKL 516
DR +M DPH +
Sbjct: 242 MDRNVMESDPHSI 254
>UniRef50_O66841 Cluster: NADH-quinone oxidoreductase subunit F;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit F - Aquifex aeolicus
Length = 426
Score = 73.7 bits (173), Expect = 2e-12
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 271 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSF-MNKPSDGRPKYLVV 447
L G + ++ L + I++ + S LRGRGGAGFPTG KW F + P P+Y +
Sbjct: 35 LKDGGYQALEKALNMSPEEIIDWVDKSTLRGRGGAGFPTGKKWKFAVQNPG---PRYFIC 91
Query: 448 NADXGEPGTCKDREIMRXDPHKL 516
NAD EPGT KDR I+ DPH L
Sbjct: 92 NADESEPGTFKDRIIIERDPHLL 114
>UniRef50_A6PMG7 Cluster: NADH dehydrogenase (Quinone) precursor;
n=1; Victivallis vadensis ATCC BAA-548|Rep: NADH
dehydrogenase (Quinone) precursor - Victivallis vadensis
ATCC BAA-548
Length = 573
Score = 72.9 bits (171), Expect = 4e-12
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+V+E+K SGLRGRGG GFPTG KW F+ K L+ NAD G+PG DR +M P
Sbjct: 136 VVDEVKLSGLRGRGGGGFPTGNKWGFL-AAKQADEKILICNADEGDPGAFMDRSLMESAP 194
Query: 508 HKL 516
H++
Sbjct: 195 HQV 197
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 72.5 bits (170), Expect = 5e-12
Identities = 36/81 (44%), Positives = 44/81 (54%)
Frame = +1
Query: 274 ARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNA 453
A G + + G ++ E+ +GL GRGGA FPTG KW D P YLV NA
Sbjct: 263 AHGGYTALRRAFALGPAAVIREVTDAGLVGRGGAAFPTGRKWQATAAQPD-HPHYLVCNA 321
Query: 454 DXGEPGTCKDREIMRXDPHKL 516
D EPGT KDR +M DP+ L
Sbjct: 322 DESEPGTFKDRVLMEGDPYAL 342
>UniRef50_A5FXJ6 Cluster: NADH dehydrogenase; n=1; Acidiphilium
cryptum JF-5|Rep: NADH dehydrogenase - Acidiphilium
cryptum (strain JF-5)
Length = 434
Score = 71.7 bits (168), Expect = 9e-12
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +1
Query: 205 LADSDRVFTNLY--GRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAG 378
+A +DR T+ GR + G G + ++ + +V E+K + +RGRGGAG
Sbjct: 1 MAMADRPLTSYIQPGRQPLDIAGYERAGGYAAMRKAFGMSPESVVEEVKRAKVRGRGGAG 60
Query: 379 FPTGMKWSFMNKPSDG-RPKYLVVNADXGEPGTCKDREIMRXDPH 510
FP G KW + +D R +YLV+NAD EPG+ KDR ++ PH
Sbjct: 61 FPAGRKWEGAPRGADAPRHRYLVINADEMEPGSFKDRLLLEAAPH 105
>UniRef50_Q7WMR8 Cluster: NAD-dependent formate dehydrogenase beta
subunit; n=107; Bacteria|Rep: NAD-dependent formate
dehydrogenase beta subunit - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 526
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +1
Query: 307 LLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDR 486
L + IV+E+ SGLRGRGGA FPTG+KW + R KY+V NAD G+ GT DR
Sbjct: 140 LAMSAEQIVDEVSASGLRGRGGAAFPTGIKWKTVLTTPAPR-KYIVCNADEGDSGTFADR 198
Query: 487 EIMRXDPHKL 516
+M DP+ L
Sbjct: 199 LLMEGDPYSL 208
>UniRef50_A0RMD3 Cluster: NADH-quinone oxidoreductase chain f; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: NADH-quinone
oxidoreductase chain f - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 406
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/91 (40%), Positives = 51/91 (56%)
Frame = +1
Query: 244 RHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSD 423
++ +++ A A G + + IL + IV + SGLRG+GG G G KW M
Sbjct: 11 KNGYKIDVAKANGAYLNLENILKMDRNSIVEAVDKSGLRGKGGGGGSCGTKWKNMLAWES 70
Query: 424 GRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
+ +YLVVN D EPGTCKD+ I+ DPH L
Sbjct: 71 DK-RYLVVNGDESEPGTCKDKYILNLDPHLL 100
>UniRef50_Q746S7 Cluster: NADH dehydrogenase I, F subunit; n=7;
Deltaproteobacteria|Rep: NADH dehydrogenase I, F subunit
- Geobacter sulfurreducens
Length = 423
Score = 70.5 bits (165), Expect = 2e-11
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1
Query: 349 SGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
+ LRGRGGAGFPTG KWSF+ + G P+YL+ N D EPGT KDR ++ +P+ L
Sbjct: 48 ANLRGRGGAGFPTGKKWSFVPRDIPG-PRYLICNCDEMEPGTYKDRILLEANPYSL 102
>UniRef50_Q1PZQ6 Cluster: Similar to NADH dehydrogenase I chain F
(1st module) EC: 1.6.5.3; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH dehydrogenase I
chain F (1st module) EC: 1.6.5.3 - Candidatus Kuenenia
stuttgartiensis
Length = 675
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
IV E+ SGLRGRGGAGFPTG+KW + + + +Y+V NA GEPGT KDR ++R +P
Sbjct: 263 IVTELLASGLRGRGGAGFPTGVKWRTLVRHT-CPTRYVVCNAAEGEPGTFKDRYLLRKNP 321
Query: 508 H 510
+
Sbjct: 322 Y 322
>UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 627
Score = 68.9 bits (161), Expect = 6e-11
Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 202 PLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDW--IVNEMKTSGLRGRGGA 375
PLA+ VFT L E R Y E LLK D +++ SG+ GRGG
Sbjct: 174 PLANEPVVFTGLRSG-ETRYLERYREDHGYRALEGLLKTGDAEAAFEQIRLSGVAGRGGG 232
Query: 376 GFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
FP K + K + P+YLV NAD GEPGT KDR IM DPH L
Sbjct: 233 AFPMYRKLDAVRK--NPPPRYLVCNADEGEPGTFKDRYIMERDPHSL 277
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 68.5 bits (160), Expect = 8e-11
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 289 YLTKEILLKG---TDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADX 459
Y T L+ G + ++ M+ SGLRG GGAGFP G KW + P+ + VN D
Sbjct: 241 YQTAAALVNGEMDAEAVLAAMEDSGLRGLGGAGFPAGRKWRIVR--DQPAPRLMAVNIDE 298
Query: 460 GEPGTCKDREIMRXDPHK 513
GEPGT KDR + DPH+
Sbjct: 299 GEPGTFKDRTYLERDPHR 316
>UniRef50_Q6N1Z2 Cluster: NADH-ubiquinone dehydrogenase chain F;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain F - Rhodopseudomonas palustris
Length = 428
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGR---PKYLVVNADXGEPGTCKDREIMR 498
I+ ++ +GLRGRGGAGFPT KW FM S+ +YL VN D EPG+ KDR +M
Sbjct: 43 IIAMVEAAGLRGRGGAGFPTANKWRFMRTGSERAGPGARYLCVNGDETEPGSFKDRLLME 102
Query: 499 XDPHKL 516
PH+L
Sbjct: 103 ALPHQL 108
>UniRef50_Q835I8 Cluster: NAD-dependent formate dehydrogenase, beta
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, beta subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 417
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
I+NE+ + LRGRGGA +P G KW + + G KY+V NAD GEPGT KD+ ++ DP
Sbjct: 30 ILNELDIAHLRGRGGAAYPLGKKWRHLYH-AKGTTKYIVCNADEGEPGTFKDKVLLSEDP 88
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 66.1 bits (154), Expect = 4e-10
Identities = 29/64 (45%), Positives = 39/64 (60%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRX 501
D +V + +GLRG GGAGFP KW + + P+++ VN D GEPGT KDR +
Sbjct: 217 DAVVAALDAAGLRGLGGAGFPAARKWRTV--AAQPAPRFMAVNIDEGEPGTFKDRHYLET 274
Query: 502 DPHK 513
DPH+
Sbjct: 275 DPHR 278
>UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7;
Bacteria|Rep: Hydrogenase subunit HymB - Dehalococcoides
sp. (strain CBDB1)
Length = 640
Score = 65.3 bits (152), Expect = 8e-10
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +1
Query: 292 LTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPG 471
L K + + ++ E+ + LRGRGG GFP G KW + +D KY++VN D G+PG
Sbjct: 163 LVKTLFHMTPESVLEEVDKANLRGRGGGGFPAGKKWRTTHDAAD-PVKYVLVNCDEGDPG 221
Query: 472 TCKDREIMRXDPH 510
DR IM +PH
Sbjct: 222 AFMDRSIMEGNPH 234
>UniRef50_Q1V283 Cluster: NAD-dependent formate dehydrogenase beta
subunit; n=2; Candidatus Pelagibacter ubique|Rep:
NAD-dependent formate dehydrogenase beta subunit -
Candidatus Pelagibacter ubique HTCC1002
Length = 552
Score = 65.3 bits (152), Expect = 8e-10
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 217 DRVFTNLYGRHEWRLKGALARGDWYLT--KEILLKGTDWIVNEMKTSGLRGRGGAGFPTG 390
++ F+ Y + + L+ D + K+ + I + S L GRGGAGFPTG
Sbjct: 140 EKFFSKSYASTSFLMDDKLSNLDQFKEQLKKFIATDKQEITKSLLDSNLTGRGGAGFPTG 199
Query: 391 MKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
MKW F K + KY++ NAD G+ G DR ++ P K+
Sbjct: 200 MKWDFCRK-APSEKKYVICNADEGDSGAFSDRYLLEDQPLKV 240
>UniRef50_A1HDX5 Cluster: NADH dehydrogenase; n=4; Ralstonia
pickettii|Rep: NADH dehydrogenase - Ralstonia pickettii
12J
Length = 525
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+VN + S LRGRGGA FP G+KW + + KY+VVNAD G+PG DR ++ DP
Sbjct: 163 LVNMVAASRLRGRGGAAFPAGIKWQAV-ASACAETKYVVVNADEGDPGAFSDRFLLEEDP 221
Query: 508 HKL 516
+L
Sbjct: 222 FRL 224
>UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=2; Proteobacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Stappia aggregata IAM 12614
Length = 626
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVV-NADXGEPGTCKDREIMRXD 504
I++ ++ SGLRG GGAGF TG KW F S+ K+ V+ NAD GEPGT KDR ++
Sbjct: 228 IISAIEESGLRGCGGAGFTTGRKWRF--AASERAEKHFVICNADEGEPGTFKDRVLLTER 285
Query: 505 PHKL 516
PH L
Sbjct: 286 PHLL 289
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +1
Query: 331 VNEMKTSGLRGRGGAGFPTGMKW-SFMNKP-SDGRPKYLVVNADXGEPGTCKDREIMRXD 504
++E+K + LRGRGGAGF TG+KW + N P G + +V NAD GEPGT KDR ++ +
Sbjct: 230 LDEIKRANLRGRGGAGFTTGLKWEACRNAPLKAGAQRIVVCNADEGEPGTFKDRVLLSRN 289
Query: 505 P 507
P
Sbjct: 290 P 290
>UniRef50_A7IMB3 Cluster: NADH dehydrogenase; n=3;
Proteobacteria|Rep: NADH dehydrogenase - Xanthobacter
sp. (strain Py2)
Length = 422
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKWS-FMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
D I+ +K + LRG GGAGFPT KWS P D KY+V N + EPGT KDR ++R
Sbjct: 45 DAIIETLKDADLRGMGGAGFPTWRKWSAAAASPCD--EKYVVCNGNEDEPGTFKDRHLLR 102
Query: 499 XDPHKL 516
PH++
Sbjct: 103 WTPHQV 108
>UniRef50_A3EW61 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 453
Score = 64.5 bits (150), Expect = 1e-09
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 331 VNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPH 510
+ E+K +GLRGRGG+GFPT +KW + R KY+V N GEPG+ KD ++ +PH
Sbjct: 57 IEELKEAGLRGRGGSGFPTAIKWEKVAHHRI-REKYVVANGSEGEPGSHKDHFLIETNPH 115
Query: 511 KL 516
++
Sbjct: 116 QI 117
>UniRef50_UPI0000384AE3 Cluster: COG1894: NADH:ubiquinone
oxidoreductase, NADH-binding (51 kD) subunit; n=1;
Magnetospirillum magnetotacticum MS-1|Rep: COG1894:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Magnetospirillum magnetotacticum MS-1
Length = 514
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKW-SFMNKPSDGRPKYLVVNADXGEPGTCKDR 486
D ++ E++ +GLRG GGAGFPT KW + +P P+ +VVNAD GEPGT KDR
Sbjct: 165 DEVLAELERAGLRGMGGAGFPTARKWRAVAARPG---PRLVVVNADEGEPGTFKDR 217
>UniRef50_O94500 Cluster: Iron sulfur cluster assembly protein; n=1;
Schizosaccharomyces pombe|Rep: Iron sulfur cluster
assembly protein - Schizosaccharomyces pombe (Fission
yeast)
Length = 452
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Frame = +1
Query: 220 RVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKW 399
R+F NL + R+ ALA G++ EIL I+ ++ S LRGRG GFPTG K
Sbjct: 33 RMFPNLIEKRIRRIDDALADGEYENLSEILKYDPLNIIELVQESELRGRGRYGFPTGEKM 92
Query: 400 SFMNKPSD---GRPK--YLVVNADXGEPGTCKDREIMRXDPHKL 516
+ K + GR + ++VNA + G+ KDR ++R +PHK+
Sbjct: 93 LSLYKATSSERGRKEKPVVIVNAAENDIGSFKDRLLLRHEPHKI 136
>UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit;
n=9; Proteobacteria|Rep: NAD-reducing hydrogenase, alpha
subunit - Methylococcus capsulatus
Length = 610
Score = 58.4 bits (135), Expect = 9e-08
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Frame = +1
Query: 256 RLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFM--------- 408
RL G R L + + L + + E++TS LRGRGGAGF T KW F
Sbjct: 179 RLLGNPVRPGEALERTLALD-RETMFGEIETSQLRGRGGAGFNTAWKWRFCYEGPETAAV 237
Query: 409 ---NKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
+P+ G +Y+V NAD GEPGT KDR +++
Sbjct: 238 CPPGQPAAGIERYVVCNADEGEPGTFKDRVLLQ 270
>UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n=1;
Psychromonas ingrahamii 37|Rep: Hydrogenase,
NADP-reducing subunit C - Psychromonas ingrahamii
(strain 37)
Length = 588
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 337 EMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
E+ SGLRG GGAGF T KW SD +Y+V NAD GEPGT KDR ++
Sbjct: 203 EIDKSGLRGCGGAGFKTAEKWKSCLL-SDDNQRYVVCNADEGEPGTFKDRVLL 254
>UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep:
Hydrogenase - Nyctotherus ovalis
Length = 1206
Score = 56.4 bits (130), Expect = 4e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +1
Query: 295 TKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGT 474
TK+ + G + ++ E+ S L GRGGAGF TG KW K + KY+V NAD G P T
Sbjct: 832 TKKAVSMGPEKVIEEVFKSNLVGRGGAGFRTGKKWESAYK-TPASDKYVVCNADEGLPST 890
Query: 475 CKD 483
KD
Sbjct: 891 YKD 893
>UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2;
Actinomycetales|Rep: NADH dehydrogenase - Arthrobacter
sp. (strain FB24)
Length = 566
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 286 WYLTKEILLKGT-DWIVNEMKTSGLRGRGGAGFPTGMKW-SFMNKPSDGRPKYLVVNADX 459
W + ++ T + I+ ++ + LRGRGGAGF KW + ++ P+ P+ +V N D
Sbjct: 186 WSVWPDVAASATPEDILLRVEAAQLRGRGGAGFRAAAKWRAALDHPA---PRVVVANGDE 242
Query: 460 GEPGTCKDREIMRXDPHKL 516
G+PG+ DR +M D H++
Sbjct: 243 GDPGSYADRLLMEQDAHRV 261
>UniRef50_Q67JR5 Cluster: NADH dehydrogenase subunit; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase
subunit - Symbiobacterium thermophilum
Length = 394
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 274 ARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGA--GFPTGMKWSFMNKPSDGRPKYLVV 447
ARG + + +G+ W++ ++ +GLRGRGG+ G P G KW + S +Y+V
Sbjct: 21 ARGGYAGLEAARTRGSGWVLEQVTRAGLRGRGGSGDGRPIGQKWQRV-AASRVPERYVVA 79
Query: 448 NADXGEPGTCKDREIMRXDPHKL 516
NA + + KDR ++ PH++
Sbjct: 80 NAAESQAVSRKDRYLLARFPHRV 102
>UniRef50_A3Q2V2 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=8; Mycobacterium|Rep:
Respiratory-chain NADH dehydrogenase domain, 51 kDa
subunit - Mycobacterium sp. (strain JLS)
Length = 433
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGR-PKYLVVNADXGEPGTCKDREIMRXD 504
+++E++ SGL GRGGA FP +K + R + N + GEP + KDR ++R
Sbjct: 49 LLDEVELSGLLGRGGAAFPMAVKLRSVRDHGRTRGGAVAIANGEEGEPASIKDRWLLRHR 108
Query: 505 PH 510
PH
Sbjct: 109 PH 110
>UniRef50_A5X3H0 Cluster: HtxX; n=1; Xanthobacter flavus|Rep: HtxX -
Xanthobacter flavus
Length = 496
Score = 45.6 bits (103), Expect = 7e-04
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +1
Query: 361 GRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPH 510
GR G GFP G KW + + G P ++VN D GE KDR I+ DPH
Sbjct: 158 GRAGVGFPVGEKWRQV-MAAGGTP-VVIVNGDEGELAIFKDRFILETDPH 205
>UniRef50_Q896I5 Cluster: RnfC/nqrF; n=18; Clostridiales|Rep:
RnfC/nqrF - Clostridium tetani
Length = 449
Score = 43.2 bits (97), Expect = 0.004
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
I+N +K +G+ G GGA FPT +K + P D + +Y+VVNA EP D +M
Sbjct: 137 IINIVKEAGIVGMGGATFPTNVK---LTPPPDKKIEYIVVNAAECEPYLTCDHRMM 189
>UniRef50_Q44SY7 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=5; Chlorobiaceae|Rep: Electron
transport complex, RnfABCDGE type, C subunit -
Chlorobium limicola DSM 245
Length = 441
Score = 43.2 bits (97), Expect = 0.004
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +1
Query: 223 VFTNLYGRHEWRLKGA-LARGDWY-LTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMK 396
VF G+ EW L+G DW L+KE +LK + SG+ G GGAGFP+G+K
Sbjct: 95 VFITPDGKDEW-LEGLNTPECDWKKLSKEEILK-------RITDSGIVGMGGAGFPSGVK 146
Query: 397 WSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
++ P D +++N EP D +M +P +
Sbjct: 147 ---LSPPKDKTIDTIILNGAECEPFLTADHRVMVEEPEAI 183
>UniRef50_Q0EPY6 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=3; Clostridia|Rep: Electron transport
complex, RnfABCDGE type, C subunit - Thermoanaerobacter
ethanolicus X514
Length = 443
Score = 41.9 bits (94), Expect = 0.008
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
I+ ++ +G+ G GGAGFPT +K ++ PSD + ++VN EP D +M P
Sbjct: 127 IIEIIREAGITGMGGAGFPTHVK---LSPPSDKKIDTILVNGAECEPYLTTDHRLMVEYP 183
Query: 508 HKL 516
K+
Sbjct: 184 EKI 186
>UniRef50_Q51696 Cluster: Putative uncharacterized protein ORF2;
n=1; Brevundimonas diminuta|Rep: Putative
uncharacterized protein ORF2 - Brevundimonas diminuta
(Pseudomonas diminuta)
Length = 401
Score = 41.5 bits (93), Expect = 0.011
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 355 LRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
L G+GGA FP+ K ++ + R KYLVVN EPG+ KD ++ P
Sbjct: 48 LSGKGGANFPSARKMRLFHQQAAPR-KYLVVNGGEHEPGSAKDDWLLLHHP 97
>UniRef50_A1SNE6 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=1; Nocardioides sp. JS614|Rep:
Respiratory-chain NADH dehydrogenase domain, 51 kDa
subunit - Nocardioides sp. (strain BAA-499 / JS614)
Length = 412
Score = 41.5 bits (93), Expect = 0.011
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 355 LRGRGGAGFPTGMKW-SFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPH 510
+RGRGGA FP +K + ++ GR +VVN GEP + KD + PH
Sbjct: 57 VRGRGGAAFPFEVKLRTAADRSRQGRRPVVVVNLSEGEPASAKDSALALTRPH 109
>UniRef50_Q21I18 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Saccharophagus degradans 2-40|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM
17024)
Length = 745
Score = 40.7 bits (91), Expect = 0.019
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
D +V +++ +G+ G GGAGFPT +K +N S+ K L+ N EP D +MR
Sbjct: 125 DRLVQKIRAAGIVGMGGAGFPTAIK---VNPKSNKHVKTLIFNGTECEPYITADDMLMR 180
>UniRef50_A7G5W1 Cluster: NADH dehydrogenase family protein; n=4;
Clostridium botulinum A|Rep: NADH dehydrogenase family
protein - Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A)
Length = 372
Score = 39.9 bits (89), Expect = 0.034
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 KGALARGDWYLTKEIL-LKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKY 438
K + + D TKE + +K D +V+ + +G+ G GGAGFPT +K NK DG Y
Sbjct: 57 KEIIIKADETQTKEFVKIKKCDNLVDTVFEAGIVGAGGAGFPTHIKLKADNK--DG---Y 111
Query: 439 LVVNADXGEPGTCKDREIMRXDP 507
++ N EP + +++ P
Sbjct: 112 IIANCVECEPALHHNMKVIEETP 134
>UniRef50_Q92CR5 Cluster: Lin1106 protein; n=13; Listeria|Rep:
Lin1106 protein - Listeria innocua
Length = 454
Score = 39.5 bits (88), Expect = 0.045
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
I+ ++K +G+ G GGAGFPT K+S G +YL++NA EP D +MR
Sbjct: 6 ILEKIKDAGVVGCGGAGFPTHAKFS-------GEVEYLIINAAECEPLLKTDHFVMR 55
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 39.5 bits (88), Expect = 0.045
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNK 414
D ++ +++ S L+G GGAGFPTG KW + +
Sbjct: 212 DSVLTQLENSALKGLGGAGFPTGKKWRIVKQ 242
>UniRef50_Q0AAG9 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=2; Chromatiales|Rep: Electron
transport complex, RnfABCDGE type, C subunit -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 515
Score = 39.5 bits (88), Expect = 0.045
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 340 MKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVN-ADXGEPGTCKDREIMRXDPHKL 516
++ +G+ G GGA FPT +K +N PSD P L+ N + TC DR +MR P ++
Sbjct: 132 VREAGIVGLGGAAFPTAIK---LNPPSDTLPDTLIANGVECDTHITCDDR-LMRERPEQI 187
>UniRef50_A1SQ39 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=1; Nocardioides sp. JS614|Rep:
Respiratory-chain NADH dehydrogenase domain, 51 kDa
subunit - Nocardioides sp. (strain BAA-499 / JS614)
Length = 412
Score = 39.5 bits (88), Expect = 0.045
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +1
Query: 355 LRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPH 510
L GRGGA FP K + P+ R + LV N EP + KDR +M PH
Sbjct: 50 LLGRGGAAFPVATK--LLAVPTGSRTQVLV-NGSESEPASRKDRTLMTLTPH 98
>UniRef50_A0LLS5 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=3; Deltaproteobacteria|Rep: Electron
transport complex, RnfABCDGE type, C subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 440
Score = 39.5 bits (88), Expect = 0.045
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
++ +++ +GL G GGAGFPT +K ++ P R L++NA EP D M P
Sbjct: 126 LLEKIRNAGLVGLGGAGFPTHLK---LSPPPGTRLDKLILNAAECEPYLNCDNRTMIEFP 182
Query: 508 HKL 516
H++
Sbjct: 183 HEI 185
>UniRef50_Q0VP39 Cluster: Electron transport complex protein rnfC;
n=4; Proteobacteria|Rep: Electron transport complex
protein rnfC - Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573)
Length = 991
Score = 39.1 bits (87), Expect = 0.059
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
+V+ ++ +G+ G GGAGFPT +K +N R + L++NA EP D +MR
Sbjct: 156 LVDIIRHAGIAGMGGAGFPTSIK---VNLGDHQRVEQLIINAVECEPYITADDRLMR 209
>UniRef50_Q73PG1 Cluster: Na(+)-translocating NADH-quinone
reductase, A subunit; n=1; Treponema denticola|Rep:
Na(+)-translocating NADH-quinone reductase, A subunit -
Treponema denticola
Length = 480
Score = 38.7 bits (86), Expect = 0.078
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 331 VNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKD 483
+ ++ +G+ G GGA FPT +K ++ P D + +Y++ N EP C D
Sbjct: 124 LKRVRDAGITGMGGASFPTHVK---LSPPPDAKIEYVIANGAECEPYLCTD 171
>UniRef50_Q2SKU6 Cluster: Predicted NADH:ubiquinone oxidoreductase,
subunit RnfC; n=4; Proteobacteria|Rep: Predicted
NADH:ubiquinone oxidoreductase, subunit RnfC - Hahella
chejuensis (strain KCTC 2396)
Length = 821
Score = 38.7 bits (86), Expect = 0.078
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
++ ++ G+ G GGAGFPT +K ++ P + + L++NA EP D +MR
Sbjct: 127 LLERVRQGGIAGMGGAGFPTAIK---LHPPRNDKVNALILNAAECEPYITADDMLMR 180
>UniRef50_A7BY78 Cluster: Electron transport complex protein rnfC;
n=1; Beggiatoa sp. PS|Rep: Electron transport complex
protein rnfC - Beggiatoa sp. PS
Length = 446
Score = 38.7 bits (86), Expect = 0.078
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 331 VNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPH 510
+N ++ +G+ G GGA FP+ +K++ P + K+LV+N EP D +M P
Sbjct: 133 INHVQKAGIVGMGGAAFPSHVKYAL---PDGMQIKHLVINGAECEPYLTNDHRLMLERPD 189
Query: 511 KL 516
L
Sbjct: 190 TL 191
>UniRef50_A3DI53 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Clostridium thermocellum ATCC
27405|Rep: Electron transport complex, RnfABCDGE type, C
subunit - Clostridium thermocellum (strain ATCC 27405 /
DSM 1237)
Length = 439
Score = 37.5 bits (83), Expect = 0.18
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 331 VNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKD-REIM 495
++ ++ SGL G GGAGFP +K ++ P D + L++NA EP D REI+
Sbjct: 123 ISAIRESGLVGLGGAGFPAHVK---LSPPPDKKIDTLIINAAECEPYITSDYREII 175
>UniRef50_A5N6H2 Cluster: RnfC related NADH dehydrogenase; n=2;
Clostridium kluyveri DSM 555|Rep: RnfC related NADH
dehydrogenase - Clostridium kluyveri DSM 555
Length = 442
Score = 37.1 bits (82), Expect = 0.24
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
++ ++K +G+ G GGAGFPT +K +N + KY +VNA EP D+ +MR
Sbjct: 3 LLKKVKDAGIIGAGGAGFPTHVK---LNT----KVKYFIVNALECEPLLQSDKYLMR 52
>UniRef50_Q67R12 Cluster: Na+-transporting NADH-quinone reductase
subunit 1; n=2; Firmicutes|Rep: Na+-transporting
NADH-quinone reductase subunit 1 - Symbiobacterium
thermophilum
Length = 446
Score = 36.7 bits (81), Expect = 0.31
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 325 WIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXD 504
+I + ++ +GL G GGAGFP +K KP P +++N EP D +M
Sbjct: 128 FIRDRVRQAGLVGMGGAGFPAAVK--LTPKPGT-EPDVVILNGAECEPAITSDHRLMLEH 184
Query: 505 PHKL 516
P ++
Sbjct: 185 PEQV 188
>UniRef50_Q482U5 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Colwellia psychrerythraea 34H|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 788
Score = 36.7 bits (81), Expect = 0.31
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
IV ++ +G+ G GGAGFPT +K S +KP K+L++N EP D +M
Sbjct: 137 IVKKIANAGIAGMGGAGFPTHIKVS--SKPD---IKFLIINGAECEPYITADDLLM 187
>UniRef50_Q1EUM7 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=1; Clostridium oremlandii
OhILAs|Rep: Respiratory-chain NADH dehydrogenase domain,
51 kDa subunit - Clostridium oremlandii OhILAs
Length = 388
Score = 36.7 bits (81), Expect = 0.31
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 304 ILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEP 468
+++K TD + +K +G+ G GGAGFPT +K D Y++VNA EP
Sbjct: 70 MMIKATDNYLEAIKEAGVVGAGGAGFPTHIKLDV-----DLTGGYVIVNAAECEP 119
>UniRef50_Q5FP48 Cluster: Outer membrane protein; n=2; Gluconobacter
oxydans|Rep: Outer membrane protein - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 518
Score = 36.3 bits (80), Expect = 0.41
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -2
Query: 380 KPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRP-YKFVKTRSLSAS 204
+P P LPR PD S+ + + P +++ +Y + AR + + P + T + +AS
Sbjct: 294 RPIPDLPRFPDSLPSIVLANRPDIRVAEAEYAADTARVGIAVSNLYPKFMIPLTFNPNAS 353
Query: 203 GPYLSFEGAWVCW 165
Y +F+ + W
Sbjct: 354 AAYQAFQAGGMAW 366
>UniRef50_A4CB98 Cluster: Electron transport complex protein RnfC;
n=3; Alteromonadales|Rep: Electron transport complex
protein RnfC - Pseudoalteromonas tunicata D2
Length = 872
Score = 36.3 bits (80), Expect = 0.41
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
I+N+++++G+ G GGAGF T +K + K YL+VN EP D +M+
Sbjct: 136 IINKIRSAGISGMGGAGFATYVKAQPLQKID-----YLIVNGVECEPYITSDDRLMQ 187
>UniRef50_Q9KT88 Cluster: Electron transport complex protein rnfC;
n=82; Gammaproteobacteria|Rep: Electron transport
complex protein rnfC - Vibrio cholerae
Length = 774
Score = 36.3 bits (80), Expect = 0.41
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 340 MKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
++ +G+ G GGAGFPT K + R + L++NA EP D +MR H++
Sbjct: 140 IRQAGISGMGGAGFPTAKKL----QSGLSRTEILIINAAECEPYITADDVLMRQYAHEI 194
>UniRef50_A7QGL6 Cluster: Chromosome chr12 scaffold_93, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_93, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 322
Score = 35.9 bits (79), Expect = 0.55
Identities = 26/98 (26%), Positives = 45/98 (45%)
Frame = -1
Query: 504 VXTHNLPVFTSTRFTXISIHHEIFWTAI*WLVHE*PLHSCWKTCSSPASKARCFHFINDP 325
V T L V FT ISI ++I AI + +E + WKT ++ +++ R HF P
Sbjct: 185 VLTWALRVLYIFSFTFISIDNKIGRMAIGYFWNEGSFDARWKTNTTTSTETRFLHFTYYP 244
Query: 324 VGSFQ*NLLRQIPVPSGESTLQPPFMSTIQVCENPIAI 211
+ + + + +P T + M I + E+ + I
Sbjct: 245 IRTLEYYVSGLVPSTHFHGTFKKWVMQPINIGEDAVLI 282
>UniRef50_Q3YL96 Cluster: CdiA; n=3; Escherichia coli|Rep: CdiA -
Escherichia coli
Length = 3132
Score = 35.1 bits (77), Expect = 0.96
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 319 TDWIVNEMKTSGLRGRGGAGFPTG 390
T W E KTSGL G GG GF TG
Sbjct: 2182 TSWRFKETKTSGLTGTGGIGFTTG 2205
>UniRef50_A4B3H4 Cluster: Electron transport complex protein RnfC;
n=1; Alteromonas macleodii 'Deep ecotype'|Rep: Electron
transport complex protein RnfC - Alteromonas macleodii
'Deep ecotype'
Length = 852
Score = 35.1 bits (77), Expect = 0.96
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
++ + +G+ G GGAGFPT +K S +KP + +L++N EP D +MR
Sbjct: 140 LIEAICQAGISGMGGAGFPTHIKTS-TSKPVE----FLILNGIECEPYITSDDRLMR 191
>UniRef50_Q9ACZ1 Cluster: Putative oxidoreductase; n=3;
Streptomyces|Rep: Putative oxidoreductase - Streptomyces
coelicolor
Length = 525
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 316 GTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPS--DGRPKYLVVNADXGEPGTCKDRE 489
G + + + L+GRGGAGFP K + + + G +VVN +P KD
Sbjct: 33 GGEQLAKLAEAINLKGRGGAGFPFHKKLRSVTEAAIKRGVRPVVVVNGSESDPSCRKDTV 92
Query: 490 IMRXDPH 510
++ PH
Sbjct: 93 LINRAPH 99
>UniRef50_A6FIW1 Cluster: Electron transport complex protein RnfC;
n=1; Moritella sp. PE36|Rep: Electron transport complex
protein RnfC - Moritella sp. PE36
Length = 931
Score = 34.7 bits (76), Expect = 1.3
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 319 TDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRP-KYLVVNADXGEPGTCKDREIM 495
T + + +G+ G GGAGFPT +K +D +P ++L++NA EP D +M
Sbjct: 133 TSELQQHISQAGVAGMGGAGFPTAVKL------NDRQPIEFLLINAAECEPYITSDDVLM 186
Query: 496 R 498
R
Sbjct: 187 R 187
>UniRef50_A1AVH8 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=2; sulfur-oxidizing symbionts|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Ruthia magnifica subsp. Calyptogena magnifica
Length = 497
Score = 34.7 bits (76), Expect = 1.3
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+++ ++ SG+ G GGAGFPT +K + + L++N EPG D +M+ P
Sbjct: 126 MIDCIQKSGIVGLGGAGFPTHVKLGKIKQCHT-----LIINGTECEPGVMCDNALMQFYP 180
Query: 508 HKL 516
++
Sbjct: 181 REI 183
>UniRef50_Q31GU4 Cluster: NADH oxidoreductase, RnfABCDGE type, C
subunit; n=1; Thiomicrospira crunogena XCL-2|Rep: NADH
oxidoreductase, RnfABCDGE type, C subunit -
Thiomicrospira crunogena (strain XCL-2)
Length = 704
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 SGLRGRGGAGFPTGMKWSFMNKPSD-GRPKYLVVNADXGEPG-TCKD 483
+G+ G GGAGFPT F PS G+ KYL++N EP TC D
Sbjct: 159 AGIVGMGGAGFPT-----FAKIPSQPGQIKYLLINGAECEPFITCDD 200
>UniRef50_A6TJY1 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Respiratory-chain NADH
dehydrogenase domain, 51 kDa subunit - Alkaliphilus
metalliredigens QYMF
Length = 448
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
I+ ++ +G+ G GGAGFPT +K DG +YL+VNA EP D+ I R
Sbjct: 3 ILEKIFEAGVVGAGGAGFPTHIK-------LDGVAEYLLVNAVECEPLLETDKFITR 52
>UniRef50_A6PV28 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=1; Victivallis vadensis ATCC
BAA-548|Rep: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit - Victivallis vadensis ATCC
BAA-548
Length = 239
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 349 SGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
+GL G GGA FPT +K ++ P D L++N EP D +M P ++
Sbjct: 135 AGLVGMGGAAFPTHVK---LSPPPDKTIDTLILNGAECEPYLTADHRLMLEQPERV 187
>UniRef50_A6PDB0 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Shewanella sediminis HAW-EB3|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Shewanella sediminis HAW-EB3
Length = 842
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
I+ +++ +G+ G GGA FPT +K +N SD + L++NA EP D +MR
Sbjct: 139 ILRKIQDAGIAGLGGAAFPTHIK---LNPASD--IELLIINAIECEPYITADDMLMR 190
>UniRef50_A0JX02 Cluster: Peptidase S9, prolyl oligopeptidase active
site domain protein; n=3; Micrococcineae|Rep: Peptidase
S9, prolyl oligopeptidase active site domain protein -
Arthrobacter sp. (strain FB24)
Length = 701
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 346 TSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEP 468
T G R A P G+ +F+ +DG+P+ VV A GEP
Sbjct: 72 TRGFRDTAPAFSPDGLVLAFLRATADGKPQLYVVEAAGGEP 112
>UniRef50_Q8AA47 Cluster: Na+-transporting NADH:ubiquinone
oxidoreductase, Electron transport complex protein rnfC;
n=10; Bacteroidetes|Rep: Na+-transporting
NADH:ubiquinone oxidoreductase, Electron transport
complex protein rnfC - Bacteroides thetaiotaomicron
Length = 445
Score = 33.9 bits (74), Expect = 2.2
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +1
Query: 292 LTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPG 471
L KE L + IV ++ +G+ G GGA FPT +K + P + + +++NA EP
Sbjct: 115 LVKECELSSEE-IVKKIADAGIVGLGGACFPTQVK---LCPPPSFKAECVIINAVECEPY 170
Query: 472 TCKDREIM 495
D ++M
Sbjct: 171 LTADHQLM 178
>UniRef50_Q82NN9 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 170
Score = 33.9 bits (74), Expect = 2.2
Identities = 28/100 (28%), Positives = 44/100 (44%)
Frame = +1
Query: 55 SARNMAGALTRVIQGTKPHLGIIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTN 234
S +A LT G + L + VP+ Q + P++D PL + RV
Sbjct: 54 SPGELAADLTVACDGRDSSVRRAAGLEPSYFEVPMDVWQVRVPARD---PLKEG-RVSLT 109
Query: 235 LYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSG 354
+ + + L RGD+Y T ++ KGTD + M +SG
Sbjct: 110 V---RDGQFAATLDRGDYYQTSYLIKKGTDGALRPMASSG 146
>UniRef50_Q1ZEG2 Cluster: Electron transport complex protein RnfC;
n=1; Psychromonas sp. CNPT3|Rep: Electron transport
complex protein RnfC - Psychromonas sp. CNPT3
Length = 839
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +1
Query: 313 KGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREI 492
+ + ++++E++ +G+ G GGAGFPT +K + L++NA EP D +
Sbjct: 138 QSSHFLIDEIQKAGIVGLGGAGFPTHLKLK-----GHEATQLLLINAAECEPYISADDRL 192
Query: 493 MRXDPHKL 516
M+ +++
Sbjct: 193 MQEHANEI 200
>UniRef50_Q1AWR7 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=2; Rubrobacter xylanophilus
DSM 9941|Rep: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 388
Score = 33.9 bits (74), Expect = 2.2
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 298 KEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRP-KYLVVNADXGEPGT 474
+E+ + V+ M+ +G+ G GG GFPT K+ RP +L+VNA EPG
Sbjct: 10 EEVKALSREEAVDIMQHAGIVGAGGGGFPTYFKYK--------RPLPHLIVNATESEPGY 61
Query: 475 CKDR 486
D+
Sbjct: 62 WGDK 65
>UniRef50_A6TUS7 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=5; Clostridiales|Rep:
Respiratory-chain NADH dehydrogenase domain, 51 kDa
subunit - Alkaliphilus metalliredigens QYMF
Length = 445
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +1
Query: 334 NEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHK 513
+++K +G+ G GGAGFPT +K D + +++++N EP D+++M P +
Sbjct: 5 DQIKEAGVIGAGGAGFPTHVK-------LDAKAEFVLLNGAECEPLLRVDQQLMEYFPEE 57
Query: 514 L 516
+
Sbjct: 58 V 58
>UniRef50_Q6LTT0 Cluster: Hypothetical type I
restriction-modification system specificity determinant;
n=1; Photobacterium profundum|Rep: Hypothetical type I
restriction-modification system specificity determinant
- Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 437
Score = 33.5 bits (73), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 184 SKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKE 303
S K G L D +TN YG EW +G GD LT+E
Sbjct: 272 SNVKQGKLVIEDAKYTNEYGYKEWTSRGVPFPGDILLTRE 311
>UniRef50_Q2BP71 Cluster: Electron transport complex protein RnfC;
n=5; Gammaproteobacteria|Rep: Electron transport complex
protein RnfC - Neptuniibacter caesariensis
Length = 1047
Score = 33.5 bits (73), Expect = 2.9
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
+++ ++ G+ G GGAGFPT +K ++ D LV+NA EP D +MR
Sbjct: 127 LLDFIRFRGISGMGGAGFPTDVK---LHLGDDHIVNTLVINAMECEPYITADDMLMR 180
>UniRef50_Q9HYB8 Cluster: Electron transport complex protein rnfC;
n=12; Gammaproteobacteria|Rep: Electron transport
complex protein rnfC - Pseudomonas aeruginosa
Length = 774
Score = 33.5 bits (73), Expect = 2.9
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
++ ++ +G+ G GGAGFPT K +P++ + LVVN EP D +MR
Sbjct: 127 LLERIRAAGIGGLGGAGFPTAAK--LAARPAE-KIHTLVVNGAECEPYISADDLLMR 180
>UniRef50_A1WT48 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Halorhodospira halophila SL1|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 448
Score = 33.1 bits (72), Expect = 3.9
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
+V ++ +G+ G+GGA FPT +K++ P LVVN EP D +M
Sbjct: 131 LVEAIRDAGIVGQGGASFPTHLKFAV---PEGYTVDTLVVNGCECEPFLSADHRLM 183
>UniRef50_A4RDW7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1706
Score = 33.1 bits (72), Expect = 3.9
Identities = 24/86 (27%), Positives = 33/86 (38%)
Frame = -2
Query: 473 VPGSPSSAFTTRYFGRPSDGLFMNDHFIPVGKPAPPLPRRPDVFISLTIQSVPFSKISFV 294
V G P + R R S G + + V P P P PD + SL + P +
Sbjct: 1409 VTGYPPKIYGRRQDHRASGGPHQYPYILSVQPPQAPYPPSPDGYTSLPMSRNPSGETQPQ 1468
Query: 293 KYQSPRARAPFNLHSCRPYKFVKTRS 216
K Q ++ AP + P TRS
Sbjct: 1469 KQQ--QSLAPMPVRHTPPVPITSTRS 1492
>UniRef50_Q8RIJ6 Cluster: Nitrogen fixation iron-sulphur protein
RNFC; n=6; Bacteria|Rep: Nitrogen fixation iron-sulphur
protein RNFC - Fusobacterium nucleatum subsp. nucleatum
Length = 441
Score = 32.7 bits (71), Expect = 5.1
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+++ ++ G+ G GGA FPT +K +N P + + L++N EP D +M +P
Sbjct: 129 LLDIIREKGIVGIGGATFPTHVK---LNPPPNTQLDSLILNGAECEPYLNSDNRLMLENP 185
Query: 508 HKL 516
+
Sbjct: 186 KSI 188
>UniRef50_Q1N6T4 Cluster: Electron transport complex protein RnfC;
n=1; Oceanobacter sp. RED65|Rep: Electron transport
complex protein RnfC - Oceanobacter sp. RED65
Length = 727
Score = 32.7 bits (71), Expect = 5.1
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 322 DWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
D +++ ++ SG+ G GGA FPT +K P + R L++NA EP D +MR
Sbjct: 129 DTLIDIIQQSGITGLGGASFPTHVKTCV---PEE-RIDTLILNAAECEPYITADDMLMR 183
>UniRef50_A4W4W3 Cluster: Filamentous haemagglutinin family outer
membrane protein precursor; n=1; Enterobacter sp.
638|Rep: Filamentous haemagglutinin family outer membrane
protein precursor - Enterobacter sp. 638
Length = 3967
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 319 TDWIVNEMKTSGLRGRGGAGFPTG 390
TDW E K SGL G GG GF G
Sbjct: 3062 TDWRFKETKKSGLMGTGGIGFTIG 3085
>UniRef50_Q9CNP2 Cluster: Electron transport complex protein rnfC;
n=21; Gammaproteobacteria|Rep: Electron transport
complex protein rnfC - Pasteurella multocida
Length = 835
Score = 32.7 bits (71), Expect = 5.1
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 301 EILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPG-TC 477
+ L + + ++ ++ +G+ G GGA FPT K K + K L++N EP TC
Sbjct: 126 DFLTQTPEKLIEKLYQAGVAGLGGAVFPTAAKLHSAEK----QVKLLIINGAECEPYITC 181
Query: 478 KDREIMR 498
DR +MR
Sbjct: 182 DDR-LMR 187
>UniRef50_UPI0000E87BCA Cluster: predicted NADH:ubiquinone
oxidoreductase, subunit RnfC; n=1; Methylophilales
bacterium HTCC2181|Rep: predicted NADH:ubiquinone
oxidoreductase, subunit RnfC - Methylophilales bacterium
HTCC2181
Length = 510
Score = 32.3 bits (70), Expect = 6.8
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 331 VNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
+ ++ SG+ G GGA FPT +K + ++ K L+VNA EP D +MR
Sbjct: 130 IKKISESGIVGLGGATFPTHLKLN-----NNNEVKTLIVNAAECEPYITCDDMLMR 180
>UniRef50_UPI0000E489C4 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 473
Score = 32.3 bits (70), Expect = 6.8
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Frame = +1
Query: 88 VIQGTKPHLGIIGPLAINVNNVPVRFQQTQAP----SKDKYGPLADSDRVFTNLYGRHEW 255
++ G PH G GP+ N+++ ++ + P S + G + D YG H
Sbjct: 77 LMPGAAPHSGS-GPMGANISSYTGQYLDSHMPGGPQSLSERGGMLSQDLNSGQPYGVHAE 135
Query: 256 RLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPK 435
+ L G T K T E KT G G GG G G N+ DG P+
Sbjct: 136 MMGSGLDNGLKSPTNTNTKKKTK--PEESKTKGGGGGGGGGGGGGGGLMLDNEREDGGPQ 193
>UniRef50_Q4S2P1 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 652
Score = 32.3 bits (70), Expect = 6.8
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +1
Query: 100 TKPHLGIIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALAR 279
T+P G I P + + + +APS + P S R G HEWR G +
Sbjct: 136 TRP--GRISPAPPKSQSPVLDLHRQRAPSPGRNHPWQGSHRGPERSPGNHEWRASGRVQP 193
Query: 280 G--DWYLTKEILLKGTDWIVNEMKTSGLRGRGG 372
G D T+ LL T + + +SG+ G G
Sbjct: 194 GDKDRQSTQTQLLDPTGSGASSLSSSGVTGSVG 226
>UniRef50_Q9WY86 Cluster: Electron transport complex protein,
putative; n=5; Bacteria|Rep: Electron transport complex
protein, putative - Thermotoga maritima
Length = 451
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
I+ +K +G+ G GGA FPT +K ++ P + + L+VN EP D +M
Sbjct: 138 ILEIIKKAGIVGLGGAMFPTHVK---LSPPPEKKVDTLIVNGAECEPVLTIDHRLM 190
>UniRef50_A6NT39 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 454
Score = 32.3 bits (70), Expect = 6.8
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMR 498
+++ ++ SGL G GGAGFPT W +N D LV+N EP D MR
Sbjct: 143 LLDAVRKSGLVGLGGAGFPT---WVKLNATVD----RLVINGSECEPYCTVDYIAMR 192
>UniRef50_Q384F1 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 573
Score = 32.3 bits (70), Expect = 6.8
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +1
Query: 181 PSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLR 360
PS++ YG LA S + L GR + AL RG L E++L+ +VN M+ +
Sbjct: 61 PSEEAYGALAPSVFYYAPLGGRFSKEFREALRRGITRLLTELVLR---QLVN-MRQEKIT 116
Query: 361 GRGGAGFPTGMKWSFMN 411
G +G +G++ SF++
Sbjct: 117 GARSSGNTSGIE-SFVS 132
>UniRef50_A4RAI3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 916
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 416 GLFMNDHFIPVGKPAP-PLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRP 240
G ++D F+ P P P R P ++L I S+ + ++ + Y P R+P + P
Sbjct: 90 GTHLDDFFVTTTIPLPLPHARHPTTVVALFIPSIRGTSVAGMPYTPPTHRSPASSQPSSP 149
Query: 239 YKFVKTRSLSASGP 198
+ S++ GP
Sbjct: 150 -DASRRSSIAGGGP 162
>UniRef50_UPI0000F2C377 Cluster: PREDICTED: similar to
estradiol-dependent oviduct-specific glycoprotein; n=2;
Mammalia|Rep: PREDICTED: similar to estradiol-dependent
oviduct-specific glycoprotein - Monodelphis domestica
Length = 540
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 491 ISLSLQVPGSPSSAFTTRYFGRPSDGLFMNDHFIPVGKPAPPLPRR 354
+ S QVPG+P+ R P G + H P+ KP PP R
Sbjct: 493 LKASTQVPGNPTILHVDRK--SPPTGSTVPSHNFPISKPVPPTTNR 536
>UniRef50_Q3A7W8 Cluster: Predicted NADH:ubiquinone oxidoreductase,
subunit RnfC; n=1; Pelobacter carbinolicus DSM 2380|Rep:
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 437
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
+++ ++ +G+ G GGA FP+ +K ++ P D ++VNA EP DR +
Sbjct: 124 MLDRIREAGVVGMGGAAFPSHVK---LDPPRDKTIDTVIVNAVECEPWLTADRRTL 176
>UniRef50_A6NTM2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 452
Score = 31.9 bits (69), Expect = 8.9
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+ +K +G+ G GGAGFPT +K S + + +VNA EP D+ + R P
Sbjct: 3 LTEAVKAAGVVGAGGAGFPTHVKLS-------AKAECFLVNAAECEPLIETDKYLCRTFP 55
Query: 508 HKL 516
++
Sbjct: 56 DRI 58
>UniRef50_A6BIN7 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 471
Score = 31.9 bits (69), Expect = 8.9
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 340 MKTSGLRGRGGAGFPTGMK 396
+K +G+ G GGAGFPTG+K
Sbjct: 90 VKAAGIVGMGGAGFPTGVK 108
>UniRef50_A5N7M5 Cluster: RnfC; n=1; Clostridium kluyveri DSM
555|Rep: RnfC - Clostridium kluyveri DSM 555
Length = 452
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIM 495
I++ ++ +G+ G GGA FP+ +K ++ P+D + ++ ++N EP D M
Sbjct: 124 IMSIIREAGIVGMGGATFPSHVK---LSPPADKKVEFFILNGAECEPYLTSDYRSM 176
>UniRef50_A1SSX3 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Psychromonas ingrahamii 37|Rep:
Electron transport complex, RnfABCDGE type, C subunit -
Psychromonas ingrahamii (strain 37)
Length = 857
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +1
Query: 328 IVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDP 507
+++ ++ SG+ G GG GFP+ +K S + K L++NA EP D +M+
Sbjct: 142 LIDLIQQSGIIGMGGGGFPSHLKLS-----NAHNVKLLIINAIECEPYITADDRLMQEHA 196
Query: 508 HKL 516
+L
Sbjct: 197 DQL 199
>UniRef50_A1I872 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=1; Candidatus Desulfococcus
oleovorans Hxd3|Rep: Electron transport complex,
RnfABCDGE type, C subunit - Candidatus Desulfococcus
oleovorans Hxd3
Length = 454
Score = 31.9 bits (69), Expect = 8.9
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 280 GDWYLTKEILLKGTDWIVNE-MKTSGLRGRGGAGFPTGMKWSFMNKPSDGRP-KYLVVNA 453
GDW K+ K ++E + +G+ G GGA FPT +K P+D RP L++N
Sbjct: 126 GDW--PKDAADKHDPKAISEAISAAGIVGLGGAAFPTHVK----IMPNDKRPVDALLING 179
Query: 454 DXGEPGTCKDREIM 495
EP D IM
Sbjct: 180 CECEPFLTPDYRIM 193
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,439,851
Number of Sequences: 1657284
Number of extensions: 13576642
Number of successful extensions: 36555
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 35057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36468
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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