Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o18
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical pr...   208   2e-54
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    31   0.49 
U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene...    29   2.0  
U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprote...    29   2.0  
Z78064-10|CAB01510.3|  299|Caenorhabditis elegans Hypothetical p...    29   2.6  
U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U97017-2|AAB52359.1|  281|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z92803-6|CAB07240.1|  215|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical
           protein C09H10.3 protein.
          Length = 479

 Score =  208 bits (508), Expect = 2e-54
 Identities = 89/110 (80%), Positives = 100/110 (90%)
 Frame = +1

Query: 187 KDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGR 366
           K  +G L DSDR+FTNLYGRH++RLKGA+ARGDW+ TKEI+LKG+DWI+ E+KTSGLRGR
Sbjct: 40  KTSFGNLKDSDRIFTNLYGRHDYRLKGAMARGDWHKTKEIILKGSDWILGELKTSGLRGR 99

Query: 367 GGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKDREIMRXDPHKL 516
           GGAGFP+GMKW FMNKP DGRPKYLVVNAD GEPGTCKDREIMR DPHKL
Sbjct: 100 GGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRHDPHKL 149


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 392 IPVGKPAPPLPRRPDVFISLTIQSVPFSKIS 300
           IP+  P PPLPR P     L   S+P+++I+
Sbjct: 492 IPMSSPPPPLPRTPQPNNGLPNASLPYNQIN 522


>U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene on
           x protein 1 protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 49  TFSARNMAGALTRVIQGTKPHLGIIGPLAINVNNVPVRFQQTQAPSK-DKYGPLADSDRV 225
           T  + N + A+T+    T    G  GP  ++V+N+P RF+     +  +K+G ++D + +
Sbjct: 128 TAGSTNGSAAVTQPDPSTSS--GPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEII 185

Query: 226 F 228
           F
Sbjct: 186 F 186


>U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprotein
           protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 49  TFSARNMAGALTRVIQGTKPHLGIIGPLAINVNNVPVRFQQTQAPSK-DKYGPLADSDRV 225
           T  + N + A+T+    T    G  GP  ++V+N+P RF+     +  +K+G ++D + +
Sbjct: 128 TAGSTNGSAAVTQPDPSTSS--GPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEII 185

Query: 226 F 228
           F
Sbjct: 186 F 186


>Z78064-10|CAB01510.3|  299|Caenorhabditis elegans Hypothetical
           protein F57B1.1 protein.
          Length = 299

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 118 CPNVVLCPESLLSVHQPYFLLKKFHTDFAFSQ 23
           C N +L    ++++H+ +    K HTD AF +
Sbjct: 80  CHNAILFSNLIIAIHRMFVFFFKKHTDIAFEK 111


>U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical
           protein K09F5.6 protein.
          Length = 802

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 334 NEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGEPGTCKD 483
           +E K SG+ G  G G    ++W    + + G+P  L+ N      G  K+
Sbjct: 751 SENKGSGIYGTSGIGSGNNVQWGGAQRAAPGQPGQLLWNPPGATNGHNKE 800


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 434 FGRPSDGLFMNDHFIPVGKPAPPLP-RRPDVF 342
           FGR +   +M  H  P   PAPP P  RP +F
Sbjct: 129 FGRENSREYMYLHRSPTTNPAPPSPLMRPKLF 160


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 434 FGRPSDGLFMNDHFIPVGKPAPPLP-RRPDVF 342
           FGR +   +M  H  P   PAPP P  RP +F
Sbjct: 190 FGRENSREYMYLHRSPTTNPAPPSPLMRPKLF 221


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 434 FGRPSDGLFMNDHFIPVGKPAPPLP-RRPDVF 342
           FGR +   +M  H  P   PAPP P  RP +F
Sbjct: 154 FGRENSREYMYLHRSPTTNPAPPSPLMRPKLF 185


>U97017-2|AAB52359.1|  281|Caenorhabditis elegans Hypothetical
           protein F47B3.4 protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 107 HIWALLGLWQLMSTMYRCASSRPRR 181
           H+W L GL  +  TM+ C  S+  +
Sbjct: 17  HLWTLFGLVSIAMTMFVCGKSKKNK 41


>Z92803-6|CAB07240.1|  215|Caenorhabditis elegans Hypothetical
           protein K01G5.4 protein.
          Length = 215

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 49  TFSARNMAGALTRVIQGTKPHLGI-IGPLAINVNNVPVRFQQTQAPSKDKYGPLAD 213
           TF  R++ G   +    T   LG+ + PL  + N   +RF       ++K+G L D
Sbjct: 24  TFVKRHLTGEFEKKYVAT---LGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRD 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,443,892
Number of Sequences: 27780
Number of extensions: 315231
Number of successful extensions: 883
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)