Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o18
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08530.1 68418.m01013 NADH-ubiquinone oxidoreductase 51 kDa s... 192 1e-49
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 31 0.61
At4g25810.1 68417.m03713 xyloglucan:xyloglucosyl transferase, pu... 30 1.1
At4g14130.1 68417.m02180 xyloglucan:xyloglucosyl transferase, pu... 29 1.4
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 29 1.9
At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase / x... 29 2.5
At1g22770.1 68414.m02845 gigantea protein (GI) identical to giga... 29 2.5
At1g11545.1 68414.m01326 xyloglucan:xyloglucosyl transferase, pu... 29 2.5
At5g65730.1 68418.m08272 xyloglucan:xyloglucosyl transferase, pu... 28 3.2
At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putati... 28 3.2
At3g23730.1 68416.m02984 xyloglucan:xyloglucosyl transferase, pu... 28 3.2
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin... 27 5.7
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin... 27 5.7
At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein ... 27 5.7
At3g45530.1 68416.m04917 DC1 domain-containing protein contains ... 27 7.5
At5g57540.1 68418.m07189 xyloglucan:xyloglucosyl transferase, pu... 27 9.9
At5g57530.1 68418.m07188 xyloglucan:xyloglucosyl transferase, pu... 27 9.9
At5g26190.1 68418.m03116 DC1 domain-containing protein contains ... 27 9.9
At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY... 27 9.9
>At5g08530.1 68418.m01013 NADH-ubiquinone oxidoreductase 51 kDa
subunit, mitochondrial, putative similar to
NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) from
{Homo sapiens} SP|P49821, {Bos taurus} SP|P25708,
{Aspergillus niger} SP|Q92406; contains Pfam profile
PF01512: Respiratory-chain NADH dehydrogenase 51 Kd
subunit
Length = 486
Score = 192 bits (468), Expect = 1e-49
Identities = 88/137 (64%), Positives = 100/137 (72%)
Frame = +1
Query: 106 PHLGIIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGD 285
P L A + + P P K +G L D DR+FTNLYG H+ LKGA+ RGD
Sbjct: 25 PALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGD 84
Query: 286 WYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADXGE 465
W+ TK+++LKGTDWIVNEMK SGLRGRGGAGFP+G+KWSFM K SDGRP YLVVNAD E
Sbjct: 85 WHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESE 144
Query: 466 PGTCKDREIMRXDPHKL 516
PGTCKDREIMR DPHKL
Sbjct: 145 PGTCKDREIMRHDPHKL 161
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 156 RYIVDINCQRPNNAQMWFCALNHSCQCTSHISC 58
+Y DI C+ +A+ WF N C T H+SC
Sbjct: 578 QYWCDI-CEAKLDAEEWFYTCNDYCNVTVHVSC 609
>At4g25810.1 68417.m03713 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative (XTR6) identical
to xyloglucan endotransglycosylase-related protein
GI:1244758 from [Arabidopsis thaliana]
Length = 286
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 130 LAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
+ +V+ P+R + S+ P R++++L+ EW +G L + DW
Sbjct: 154 IIFSVDGTPIR-EFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDW 205
>At4g14130.1 68417.m02180 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative (XTR7) almost
identical to xyloglucan endotransglycosylase-related
protein XTR7 GI:1244760 from [Arabidopsis thaliana], one
amino acid difference
Length = 289
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +1
Query: 142 VNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
V+N+P+R + P + R++++L+ +W +G L + DW
Sbjct: 160 VDNLPIRVFNNAEKLGVPF-PKSQPMRIYSSLWNADDWATRGGLVKTDW 207
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -2
Query: 428 RPSDGLFMNDHFIPVGKPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHS 249
R S F+ H I + P P R+P S PFS +S KYQ R+ N +
Sbjct: 8 RSSSNFFLGSHII-ISSPTPKTTRKP---------SFPFSFVSRAKYQITRSSQDENSPN 57
Query: 248 CRP 240
+P
Sbjct: 58 GKP 60
>At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (XTR3) identical to endoxyloglucan
transferase GI:5533317 from [Arabidopsis thaliana]
Length = 284
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 142 VNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
V+++PVR + +Y P R++++L+ +W +G L + DW
Sbjct: 162 VDDIPVREFKNLQHMGIQY-PKLQPMRLYSSLWNADQWATRGGLVKTDW 209
>At1g22770.1 68414.m02845 gigantea protein (GI) identical to
gigantea protein SP:Q9SQI2 from [Arabidopsis thaliana]
Length = 1173
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1
Query: 366 PASKARCFHFINDPVGSFQ*NLLRQIPVPSGESTLQPPFMS-TIQVCENPIAIGQRSILV 190
P S+ + P+G + N +QI VP+ E+T++ +C + + R +
Sbjct: 406 PLSQVEGVEIQHAPIGGYSSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTI 465
Query: 189 F*RRLGLLEAHRYIVDI 139
+ GL+ + VD+
Sbjct: 466 WEAAYGLIPLNSSAVDL 482
>At1g11545.1 68414.m01326 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
endo-xyloglucan transferase GI:2244732 from [Gossypium
hirsutum]
Length = 305
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 130 LAINVNNVPVRFQQT--QAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
L V+ VP+R + + P+ D + P +F++++ +W +G L + DW
Sbjct: 169 LVFFVDRVPIRVYKNSDKVPNNDFF-PNQKPMYLFSSIWNADDWATRGGLEKTDW 222
>At5g65730.1 68418.m08272 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
endo-xyloglucan transferase GI:2244732 from [Gossypium
hirsutum]
Length = 292
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 142 VNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
V++VP+R + Y P + V++ L+ +W +G L + DW
Sbjct: 168 VDDVPIREYKNNEAKNIAY-PTSQPMGVYSTLWEADDWATRGGLEKIDW 215
>At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putative
similar to GTP-binding protein atran3 GI:2058280 from
[Arabidopsis thaliana]
Length = 222
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 49 TFSARNMAGALTRVIQGTKPHLGI-IGPLAINVNNVPVRFQQTQAPSKDKYGPLADS 216
TF R++ G T+P LG+ I PL N +RF+ ++KY L D+
Sbjct: 28 TFLKRHLTGEFEH---NTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDA 81
>At3g23730.1 68416.m02984 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase-related protein
GI:1244760 from [Arabidopsis thaliana]
Length = 291
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 142 VNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
V+NVP+R + P +++++L+ +W +G L + DW
Sbjct: 159 VDNVPIRVFNNAEQLGVPF-PKNQPMKIYSSLWNADDWATRGGLVKTDW 206
>At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -2
Query: 341 ISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRPYKFVKTRSLSASGPYLSFEGAWVCW 165
I L Q +PF V ++ P NLH R YK + + +A + F G C+
Sbjct: 32 IDLITQQIPFKNNQTVLFKDSIYHKPNNLH-LRLYKPISASNRTALPVVVFFHGGGFCF 89
>At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -2
Query: 341 ISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRPYKFVKTRSLSASGPYLSFEGAWVCW 165
I L Q +PF V ++ P NLH R YK + + +A + F G C+
Sbjct: 32 IDLITQQIPFKNNQTVLFKDSIYHKPNNLH-LRLYKPISASNRTALPVVVFFHGGGFCF 89
>At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein
contains Pfam domain PF01363: FYVE zinc finger
Length = 485
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +1
Query: 289 YLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNA 453
Y + I K D+ ++ G G G+ G KWS + P+ +Y ++++
Sbjct: 11 YSEENIKFKYDDYDDDDDDDDGSGSGSGGGYEDGPKWSVQSIPTKKEVEYPIIDS 65
>At3g45530.1 68416.m04917 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 692
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 156 RYIVDINCQRPNNAQMWFCALNHSCQCTSHISC 58
+Y DI C+R N + WF N C T H C
Sbjct: 556 KYWCDI-CERETNPETWFYTCN-DCGVTLHTFC 586
>At5g57540.1 68418.m07189 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase (XTR9) GI:4218963 from
[Arabidopsis thaliana]
Length = 284
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/49 (20%), Positives = 25/49 (51%)
Frame = +1
Query: 142 VNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
V+ +P+R + + Y P + +++++L+ +W +G + DW
Sbjct: 158 VDGIPIRVFKNNEANGVAY-PKSQPMKIYSSLWEADDWATQGGKVKTDW 205
>At5g57530.1 68418.m07188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase XTR9 GI:4218963 from
[Arabidopsis thaliana]
Length = 285
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/49 (20%), Positives = 25/49 (51%)
Frame = +1
Query: 142 VNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDW 288
V+ +P+R + + Y P + +++++L+ +W +G + DW
Sbjct: 159 VDGIPIRVFKNNEANGVAY-PKSQPMKIYSSLWEADDWATQGGKVKTDW 206
>At5g26190.1 68418.m03116 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 556
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 135 CQRPNNAQMWFCALNHSCQCTSHISC 58
C++P + + WF + + C T HI C
Sbjct: 456 CEKPTDPRKWFYSCDKCCS-TLHIDC 480
>At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY1)
similar to Ara4-interacting protein [Arabidopsis
thaliana] GI:13160609; contains Pfam profiles PF00789:
UBX domain, PF02809: Ubiquitin interaction motif
Length = 564
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -2
Query: 479 LQVPGSPSSAFTT-RYFGRPSDGLFMNDHFIPVGKPAPPLPRRPDVFISLTIQSVP 315
+ P SP S F R GRP L +D V P +PR P V ++ +P
Sbjct: 67 IPAPQSPLSMFNAARTIGRPPFSLLDSDFARRVFDSDPLMPRPPFVSHPREVRQIP 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,791,635
Number of Sequences: 28952
Number of extensions: 294511
Number of successful extensions: 796
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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