Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o14
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    25   0.49 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.49 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.49 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.85 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +2

Query: 347 TIVPSEYWQTK*HVRQSKCAYYQMSFRVIVNEL*HDLEWNVKLNQSY 487
           T+ P ++   + ++R +   +  + FR++ N+L    E  VK NQ+Y
Sbjct: 54  TMTPLDFMDFRCYLRPAS-GFQSLQFRLLENKLGVRQENRVKYNQNY 99


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +2

Query: 347 TIVPSEYWQTK*HVRQSKCAYYQMSFRVIVNEL*HDLEWNVKLNQSY 487
           T+ P ++   + ++R +   +  + FR++ N+L    E  VK NQ+Y
Sbjct: 114 TMTPLDFMDFRCYLRPAS-GFQSLQFRLLENKLGVRQENRVKYNQNY 159


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +2

Query: 347 TIVPSEYWQTK*HVRQSKCAYYQMSFRVIVNEL*HDLEWNVKLNQSY 487
           T+ P ++   + ++R +   +  + FR++ N+L    E  VK NQ+Y
Sbjct: 114 TMTPLDFMDFRCYLRPAS-GFQSLQFRLLENKLGVRQENRVKYNQNY 159


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 278 FWLGTITRLDLIISGANIVLPVSSAADL 195
           FWL     L  I+ G N+VL V + ADL
Sbjct: 666 FWLFHCHFLFHIVIGMNLVLQVGTHADL 693


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 291 WFEHILAWHNNPSRLNHFRG 232
           WF   L  H+NPS     +G
Sbjct: 22  WFRRGLRLHDNPSLREGLKG 41


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 245 IISGANIVLPVSSAADLIACIAIGAFDGVKICLN 144
           ++SG +I     S + L  C+A  AF      +N
Sbjct: 856 VLSGLSIKRTERSDSALFTCVATNAFGSDDTSIN 889


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,075
Number of Sequences: 336
Number of extensions: 3432
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)