Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o14
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          36   0.14 
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                36   0.14 
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    33   0.58 

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
 Frame = +1

Query: 235  PEMIKSRRVIVPSQNMFEPIAVPREREIVPLSSIVPANDCPIRILANEIA--RAPIEVRV 408
            P+ ++ +R+I+P +    P+ V  E E  P+S      + P      E+A  R P  ++ 
Sbjct: 6881 PKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKK 6940

Query: 409  LPNEFPCDCQRTLTRPRVECQTQSVIPFEQYPVNEFYRSAPVVNYMSPPNVPREAASGGT 588
               E P    + +  P    +    IP E+ PV    + AP       P VP++      
Sbjct: 6941 AVPEAPTPVPKKVEAP--PAKVSKKIPEEKVPVPVQKKEAPPAKV---PEVPKKVPEKKV 6995

Query: 589  LI 594
            L+
Sbjct: 6996 LV 6997


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
 Frame = +1

Query: 235   PEMIKSRRVIVPSQNMFEPIAVPREREIVPLSSIVPANDCPIRILANEIA--RAPIEVRV 408
             P+ ++ +R+I+P +    P+ V  E E  P+S      + P      E+A  R P  ++ 
Sbjct: 11143 PKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKK 11202

Query: 409   LPNEFPCDCQRTLTRPRVECQTQSVIPFEQYPVNEFYRSAPVVNYMSPPNVPREAASGGT 588
                E P    + +  P    +    IP E+ PV    + AP       P VP++      
Sbjct: 11203 AVPEAPTPVPKKVEAP--PAKVSKKIPEEKVPVPVQKKEAPPAKV---PEVPKKVPEKKV 11257

Query: 589   LI 594
             L+
Sbjct: 11258 LV 11259


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 33.5 bits (73), Expect = 0.58
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
 Frame = +1

Query: 235 PEMIKSRRVIVPSQNMFEPIAVPREREIVPLSSIVPANDCPIRILANEIA--RAPIEVRV 408
           P+ ++ +R+I+P +    P+ V  E E  P+S      + P      E+A  R P  ++ 
Sbjct: 286 PKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKK 345

Query: 409 LPNEFPCDCQRTLTRPRVECQTQSVIPFEQYPVNEFYRSAP 531
              E P    + +  P    +    IP E+ PV    + AP
Sbjct: 346 AVPEAPTPVPKKVEAP--PAKVSKKIPEEKVPVPVQKKEAP 384


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,834,050
Number of Sequences: 237096
Number of extensions: 1973895
Number of successful extensions: 4560
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4560
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)