Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o14
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z71265-2|CAA95834.2| 128|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF043699-1|AAB97563.2| 202|Caenorhabditis elegans Hypothetical ... 29 1.9
AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical... 29 2.5
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z11115-17|CAA77455.3| 228|Caenorhabditis elegans Hypothetical p... 28 4.4
U40945-2|AAA81720.1| 445|Caenorhabditis elegans Hypothetical pr... 28 4.4
AY513235-1|AAS21678.1| 228|Caenorhabditis elegans thiamine pyro... 28 4.4
AF125955-6|AAD14714.1| 168|Caenorhabditis elegans Hypothetical ... 28 4.4
AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 228 HRSARILCGRFNSLYCHWCFRWRQNLPQ 145
HR + I+C R +L HWC W + PQ
Sbjct: 1034 HRCSLIVCPR--TLVDHWCLEWNRFFPQ 1059
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 228 HRSARILCGRFNSLYCHWCFRWRQNLPQ 145
HR + I+C R +L HWC W + PQ
Sbjct: 1034 HRCSLIVCPR--TLVDHWCLEWNRFFPQ 1059
>Z71265-2|CAA95834.2| 128|Caenorhabditis elegans Hypothetical
protein M05B5.2 protein.
Length = 128
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 75 LRLNHLIITTVVCPMSRYSSSL-IIEANFDAIESTNGNTSY*ICRRGYGQNDVCP 236
+RL HL V+C + Y++ + + IE GN C GYG CP
Sbjct: 3 IRLRHLAFAAVLCTLCYYANGQGLNDPITQYIEGRLGNRRIFWCPSGYGYLAFCP 57
>AF043699-1|AAB97563.2| 202|Caenorhabditis elegans Hypothetical
protein K02F2.5 protein.
Length = 202
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 229 FAPEMIKSRRVIVPSQNMFEPIA-VPREREIVPLSSIVPANDCPIRILAN-EIARAPIEV 402
+ PE +++ VI + + +PI +PR+R VP+ ND P + N E+ P E
Sbjct: 107 YNPESVEAYEVIELPEYLTQPIEYMPRDRRSVPVFEAYDENDLPEQFEENQEVIFVPEEA 166
Query: 403 RV 408
+
Sbjct: 167 LI 168
>AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical
protein F42A6.1 protein.
Length = 328
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 289 PIAVPREREIVPLSSIVPANDCPIRILANEIARAPIEVRVLPNEF 423
P A PR + IVP S + P R+L EI++ P+ + LP+ F
Sbjct: 286 PKASPR-KSIVPRSGSIVGIQKP-RVLQQEISKGPLHLPPLPSRF 328
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = -1
Query: 374 FASILMGQSLAGTILDNGTISRSLGTAIGSNIFWLGT----ITRLDLIISGANIVLPVSS 207
FAS L G + +G IL L ++ G + FW T I+++ + + IVL
Sbjct: 451 FASTLFGPNDSGIILQATEKQIRLMSSSGLSKFWEPTNGEIISKVSVNAANGQIVLAARD 510
Query: 206 AADLIACIA--IGAFD 165
L+ CI +GA D
Sbjct: 511 TVYLLTCIVDEMGALD 526
>Z11115-17|CAA77455.3| 228|Caenorhabditis elegans Hypothetical
protein ZK637.9a protein.
Length = 228
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 176 GAFDGVKICLNNEARAVSGHWAYDCCDDKMIETQTKMTLILPIVWRSVILST 21
G FD L++ R V D D +E TKM I+PIV + I+S+
Sbjct: 124 GRFDHTMSTLSSLIRFVDSQTPGDSNLDVNLEMTTKMCGIIPIVQKETIVSS 175
>U40945-2|AAA81720.1| 445|Caenorhabditis elegans Hypothetical
protein F10D7.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 347 LAGTILDNGTISRSLGTAIGSNIFWL 270
LAG G ++R+LG I S FWL
Sbjct: 387 LAGIFRSLGCLARALGPVISSTFFWL 412
>AY513235-1|AAS21678.1| 228|Caenorhabditis elegans thiamine
pyrophosphokinase protein.
Length = 228
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 176 GAFDGVKICLNNEARAVSGHWAYDCCDDKMIETQTKMTLILPIVWRSVILST 21
G FD L++ R V D D +E TKM I+PIV + I+S+
Sbjct: 124 GRFDHTMSTLSSLIRFVDSQTPGDSNLDVNLEMTTKMCGIIPIVQKETIVSS 175
>AF125955-6|AAD14714.1| 168|Caenorhabditis elegans Hypothetical
protein F46E10.3 protein.
Length = 168
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = -1
Query: 449 VKVR*QSHGNSFGSTRTSIGARAISFASILMGQSLAGTILDNGTISRSL 303
+K++ +S GNS+G + + ++ + LM ++GT++ N R+L
Sbjct: 6 LKIKHESKGNSYGVCKKTPERICLTSKNELMEVCISGTVISNEQYERNL 54
>AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical
protein Y77E11A.7c protein.
Length = 577
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 148 RQILTPSKAPMAIQAIKSAAEDTGRTMFAPEM-IKSRRVIVPSQNMFEPIAVPREREIVP 324
R++ TPS +A + + + P+ I ++ VP EP++V +ER++ P
Sbjct: 4 RKVRTPSAKLLAAKQDEVFEKVIPTAQLTPKSTISAQMAKVPESTTPEPLSVDQERDMTP 63
Query: 325 LSSIV 339
+S++
Sbjct: 64 DASVL 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,529,633
Number of Sequences: 27780
Number of extensions: 323176
Number of successful extensions: 870
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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