BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10o11 (642 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g78660.3 68414.m09168 gamma-glutamyl hydrolase, putative / ga... 92 3e-19 At1g78660.2 68414.m09169 gamma-glutamyl hydrolase, putative / ga... 92 3e-19 At1g78660.1 68414.m09167 gamma-glutamyl hydrolase, putative / ga... 92 3e-19 At1g78680.1 68414.m09171 gamma-glutamyl hydrolase (GGH1) / gamma... 84 9e-17 At1g78670.1 68414.m09170 gamma-glutamyl hydrolase, putative / ga... 79 2e-15 At5g63450.1 68418.m07965 cytochrome P450, putative 29 2.6 At3g22720.1 68416.m02866 F-box family protein similar to F-box p... 29 3.5 At2g34890.1 68415.m04283 CTP synthase, putative / UTP--ammonia l... 29 3.5 At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical ... 28 6.1 At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical ... 28 6.1 At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical ... 28 6.1 At3g54320.2 68416.m06004 ovule development protein, putative sim... 27 8.0 At3g54320.1 68416.m06003 ovule development protein, putative sim... 27 8.0 >At1g78660.3 68414.m09168 gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana} Length = 348 Score = 91.9 bits (218), Expect = 3e-19 Identities = 45/121 (37%), Positives = 74/121 (61%) Frame = +1 Query: 178 VNDRPIIGVLSQEQSFYLHGKFPEENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKE 357 +N RP+IG+LS G+ + ++YIA+SYVK EA GARV+P++ + + Sbjct: 51 LNYRPVIGILSHPGDG-ASGRLTNDTSSTYIAASYVKFAEAGGARVIPLIYNEPEEVLFQ 109 Query: 358 LMKKINGVLIPGGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCLGFELLVILA 537 ++ +NGV+ GG + + Y + + I+ A+E ND G++FP++G CLGFEL+ I+ Sbjct: 110 KLELVNGVIFTGG---WAKKYDYFEIVKKIFTKALERNDAGEHFPVYGICLGFELMSIII 166 Query: 538 S 540 S Sbjct: 167 S 167 >At1g78660.2 68414.m09169 gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana} Length = 347 Score = 91.9 bits (218), Expect = 3e-19 Identities = 45/121 (37%), Positives = 74/121 (61%) Frame = +1 Query: 178 VNDRPIIGVLSQEQSFYLHGKFPEENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKE 357 +N RP+IG+LS G+ + ++YIA+SYVK EA GARV+P++ + + Sbjct: 50 LNYRPVIGILSHPGDG-ASGRLTNDTSSTYIAASYVKFAEAGGARVIPLIYNEPEEVLFQ 108 Query: 358 LMKKINGVLIPGGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCLGFELLVILA 537 ++ +NGV+ GG + + Y + + I+ A+E ND G++FP++G CLGFEL+ I+ Sbjct: 109 KLELVNGVIFTGG---WAKKYDYFEIVKKIFTKALERNDAGEHFPVYGICLGFELMSIII 165 Query: 538 S 540 S Sbjct: 166 S 166 >At1g78660.1 68414.m09167 gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana} Length = 348 Score = 91.9 bits (218), Expect = 3e-19 Identities = 45/121 (37%), Positives = 74/121 (61%) Frame = +1 Query: 178 VNDRPIIGVLSQEQSFYLHGKFPEENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKE 357 +N RP+IG+LS G+ + ++YIA+SYVK EA GARV+P++ + + Sbjct: 51 LNYRPVIGILSHPGDG-ASGRLTNDTSSTYIAASYVKFAEAGGARVIPLIYNEPEEVLFQ 109 Query: 358 LMKKINGVLIPGGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCLGFELLVILA 537 ++ +NGV+ GG + + Y + + I+ A+E ND G++FP++G CLGFEL+ I+ Sbjct: 110 KLELVNGVIFTGG---WAKKYDYFEIVKKIFTKALERNDAGEHFPVYGICLGFELMSIII 166 Query: 538 S 540 S Sbjct: 167 S 167 >At1g78680.1 68414.m09171 gamma-glutamyl hydrolase (GGH1) / gamma-Glu-X carboxypeptidase / conjugase identical to SP|O65355 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) {Arabidopsis thaliana} Length = 347 Score = 83.8 bits (198), Expect = 9e-17 Identities = 43/121 (35%), Positives = 70/121 (57%) Frame = +1 Query: 178 VNDRPIIGVLSQEQSFYLHGKFPEENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKE 357 +N RP+IG+LS G+ S IA+SYVK E+ GARV+P++ + + Sbjct: 50 LNYRPVIGILSHPGDG-ASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQ 108 Query: 358 LMKKINGVLIPGGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCLGFELLVILA 537 ++ +NGV++ GG + + Y + + I+ +E ND G++FPI+ CLGFELL ++ Sbjct: 109 KLELVNGVILTGG---WAKEGLYFEIVKKIFNKVLERNDAGEHFPIYAICLGFELLTMII 165 Query: 538 S 540 S Sbjct: 166 S 166 >At1g78670.1 68414.m09170 gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative similar to gamma glutamyl hydrolase GI:1679658 SP|P93164 from [Glycine max] Length = 352 Score = 79.4 bits (187), Expect = 2e-15 Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 6/127 (4%) Frame = +1 Query: 178 VNDRPIIGVLSQEQSFYLHGKFPE-ENYT-----SYIASSYVKDIEASGARVVPILIGKD 339 +N +P+IG+L+ + +NY SYIA+SYVK E GARV+P++ + Sbjct: 54 LNYKPVIGILTHPGEGRWDARLHSLKNYAYATNISYIAASYVKLAETGGARVIPLIYNEP 113 Query: 340 RSYYKELMKKINGVLIPGGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCLGFE 519 + ++ +NGV+ GG + ++ Y D + I+ +E ND G++FP++ CLGFE Sbjct: 114 EEILFQKLELVNGVIFTGG---WAKTGLYYDVVEKIFNKVMEKNDAGEHFPVYAMCLGFE 170 Query: 520 LLVILAS 540 +L ++ S Sbjct: 171 ILSMIIS 177 >At5g63450.1 68418.m07965 cytochrome P450, putative Length = 510 Score = 29.1 bits (62), Expect = 2.6 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -2 Query: 86 TVNQSSPENESHLIKTNFISF 24 T+ ++PEN H++KTNF +F Sbjct: 83 TIITANPENVEHILKTNFYNF 103 >At3g22720.1 68416.m02866 F-box family protein similar to F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis thaliana]; contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640 : F-box protein interaction domain Length = 378 Score = 28.7 bits (61), Expect = 3.5 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = +1 Query: 127 VFHCEGAVIVDSNEYSVVNDRPIIGVLSQEQSFYLHGKFPEENYTSYIASSYVKDIEA 300 VFHC+G ++ +N+ +V P +G ++ ++ K Y S A Y+++ E+ Sbjct: 97 VFHCDGLLLCTTNDDRLVVWNPCLG-----ETKWIQLKVDYRRYVSIFALGYIQNNES 149 >At2g34890.1 68415.m04283 CTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I Length = 597 Score = 28.7 bits (61), Expect = 3.5 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = +1 Query: 355 ELMKKINGVLIPGGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCLGFELLVI 531 +L+K NGVL+PG G+ D G LA + + P G CLG ++ VI Sbjct: 358 KLLKDANGVLLPG---------GFGDRGVEGMILAAKYARENN-IPFLGICLGMQIAVI 406 >At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical to protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana] Length = 453 Score = 27.9 bits (59), Expect = 6.1 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 334 KDRSYYKELMKKINGVLIP-GGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCL 510 KD SY+K L K LI G TF +Q + Y + +H Y + VG +P + Sbjct: 253 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRH-YRAPEVILGVGWNYPCDLWSI 311 Query: 511 GFELLVILASG 543 G +LV L SG Sbjct: 312 GC-ILVELCSG 321 >At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical to protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana] Length = 467 Score = 27.9 bits (59), Expect = 6.1 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 334 KDRSYYKELMKKINGVLIP-GGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCL 510 KD SY+K L K LI G TF +Q + Y + +H Y + VG +P + Sbjct: 267 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRH-YRAPEVILGVGWNYPCDLWSI 325 Query: 511 GFELLVILASG 543 G +LV L SG Sbjct: 326 GC-ILVELCSG 335 >At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical to protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana] Length = 467 Score = 27.9 bits (59), Expect = 6.1 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 334 KDRSYYKELMKKINGVLIP-GGATFFNQSNGYADAGQHIYELAIELNDVGDYFPIFGTCL 510 KD SY+K L K LI G TF +Q + Y + +H Y + VG +P + Sbjct: 267 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRH-YRAPEVILGVGWNYPCDLWSI 325 Query: 511 GFELLVILASG 543 G +LV L SG Sbjct: 326 GC-ILVELCSG 335 >At3g54320.2 68416.m06004 ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana] Length = 356 Score = 27.5 bits (58), Expect = 8.0 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 3/109 (2%) Frame = -1 Query: 630 ILLERKSEVKSSGRFSKRVTSDSIF--FLSPP*GQDNEELKTKTGSEDRKIVSDVVQFYS 457 IL+E K EV++ R +K + + ++ P ++ E+ + K ++ +IV YS Sbjct: 178 ILVEAKQEVET--REAKEEPREEVKQQYVEEPPQEEEEKEEEKAEQQEAEIVG-----YS 230 Query: 456 KLVNVLTGVSVSIGLVE-ERCSPGNQYSINFLHQLLIIRTIFTDQNRHN 313 + V+ S ++E +RC N+ + NF TDQN N Sbjct: 231 EEAAVVNCCIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLAN 279 >At3g54320.1 68416.m06003 ovule development protein, putative similar to ovule development protein aintegumenta (GI:1209099) [Arabidopsis thaliana] Length = 427 Score = 27.5 bits (58), Expect = 8.0 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 3/109 (2%) Frame = -1 Query: 630 ILLERKSEVKSSGRFSKRVTSDSIF--FLSPP*GQDNEELKTKTGSEDRKIVSDVVQFYS 457 IL+E K EV++ R +K + + ++ P ++ E+ + K ++ +IV YS Sbjct: 249 ILVEAKQEVET--REAKEEPREEVKQQYVEEPPQEEEEKEEEKAEQQEAEIVG-----YS 301 Query: 456 KLVNVLTGVSVSIGLVE-ERCSPGNQYSINFLHQLLIIRTIFTDQNRHN 313 + V+ S ++E +RC N+ + NF TDQN N Sbjct: 302 EEAAVVNCCIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLAN 350 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,673,706 Number of Sequences: 28952 Number of extensions: 291315 Number of successful extensions: 800 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 782 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 795 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1324661040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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