Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o09
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81900-1|CAA57489.1| 70|Homo sapiens NADH oxidoreductase subun... 42 4e-04
U54993-1|AAD00084.1| 70|Homo sapiens mitochondrial complex I h... 42 4e-04
CR456889-1|CAG33170.1| 70|Homo sapiens ZNF183 protein. 42 4e-04
BC000266-1|AAH00266.1| 70|Homo sapiens NADH dehydrogenase (ubi... 42 4e-04
BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein. 30 1.4
AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein pr... 30 1.4
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 30 1.4
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 28 7.4
BC050557-1|AAH50557.1| 1208|Homo sapiens timeless homolog (Droso... 28 7.4
BC039842-1|AAH39842.1| 532|Homo sapiens Similar to timeless hom... 28 7.4
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 28 7.4
AF098162-1|AAC80011.1| 1208|Homo sapiens timeless homolog protein. 28 7.4
AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein pro... 28 7.4
AB015597-1|BAA36499.1| 1208|Homo sapiens hTIM1 protein. 28 7.4
>X81900-1|CAA57489.1| 70|Homo sapiens NADH oxidoreductase subunit
MWFE protein.
Length = 70
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 56 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 229
MW+EILP ++ + +PG +IH T G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 230 YEVNGLEAI 256
Y GLE I
Sbjct: 61 YVSKGLENI 69
>U54993-1|AAD00084.1| 70|Homo sapiens mitochondrial complex I
hMWFE subunit protein.
Length = 70
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 56 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 229
MW+EILP ++ + +PG +IH T G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 230 YEVNGLEAI 256
Y GLE I
Sbjct: 61 YVSKGLENI 69
>CR456889-1|CAG33170.1| 70|Homo sapiens ZNF183 protein.
Length = 70
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 56 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 229
MW+EILP ++ + +PG +IH T G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 230 YEVNGLEAI 256
Y GLE I
Sbjct: 61 YVSKGLENI 69
>BC000266-1|AAH00266.1| 70|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 1, 7.5kDa protein.
Length = 70
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 56 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 229
MW+EILP ++ + +PG +IH T G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 230 YEVNGLEAI 256
Y GLE I
Sbjct: 61 YVSKGLENI 69
>BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein.
Length = 954
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 269 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 189
+++PG PSHSL +D++ + GTTH
Sbjct: 913 YSFPGERPSHSLSRDFKNQTTLLGTTH 939
>AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 269 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 189
+++PG PSHSL +D++ + GTTH
Sbjct: 804 YSFPGERPSHSLSRDFKNQTTLLGTTH 830
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 269 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 189
+++PG PSHSL +D++ + GTTH
Sbjct: 898 YSFPGERPSHSLSRDFKNQTTLLGTTH 924
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 125 YHIHNLTLGNHYRR--SLTDRWSRALYQRDMRLTGNPYEVNGLEAIPDN 265
Y +++L LG + LTDRW R Q D RL ++ L DN
Sbjct: 846 YPLYDLDLGKFGEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNYRDN 894
>BC050557-1|AAH50557.1| 1208|Homo sapiens timeless homolog
(Drosophila) protein.
Length = 1208
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 125 YHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYE-----VNGLEAIPD 262
+H L N+Y LTDR A + R M L Y+ VN ++ PD
Sbjct: 408 FHFIEQNLTNYYEMMLTDRKEAASWARRMHLALKAYQELLATVNEMDISPD 458
>BC039842-1|AAH39842.1| 532|Homo sapiens Similar to timeless
homolog (Drosophila) protein.
Length = 532
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 125 YHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYE-----VNGLEAIPD 262
+H L N+Y LTDR A + R M L Y+ VN ++ PD
Sbjct: 407 FHFIEQNLTNYYEMMLTDRKEAASWARRMHLALKAYQELLATVNEMDLSPD 457
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 125 YHIHNLTLGNHYRR--SLTDRWSRALYQRDMRLTGNPYEVNGLEAIPDN 265
Y +++L LG + LTDRW R Q D RL ++ L DN
Sbjct: 846 YPLYDLDLGKFGEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNYRDN 894
>AF098162-1|AAC80011.1| 1208|Homo sapiens timeless homolog protein.
Length = 1208
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 125 YHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYE-----VNGLEAIPD 262
+H L N+Y LTDR A + R M L Y+ VN ++ PD
Sbjct: 408 FHFIEQNLTNYYEMMLTDRKEAASWARRMHLALKAYQELLATVNEMDLSPD 458
>AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein protein.
Length = 2319
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 125 YHIHNLTLGNHYRR--SLTDRWSRALYQRDMRLTGNPYEVNGLEAIPDN 265
Y +++L LG + LTDRW R Q D RL ++ L DN
Sbjct: 893 YPLYDLDLGKFGEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNYRDN 941
>AB015597-1|BAA36499.1| 1208|Homo sapiens hTIM1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +2
Query: 125 YHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYE-----VNGLEAIPD 262
+H L N+Y LTDR A + R M L Y+ VN ++ PD
Sbjct: 408 FHFIEQNLTNYYEMMLTDRKEAASWARRMHLALKAYQELLATVNEMDLSPD 458
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,096,553
Number of Sequences: 237096
Number of extensions: 825415
Number of successful extensions: 1289
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -