Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o09
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 29 1.0
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 26 5.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 26 5.4
AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical... 26 5.4
Z82285-7|CAB05301.1| 548|Caenorhabditis elegans Hypothetical pr... 25 9.5
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 25 9.5
>Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical
protein ZK662.3b protein.
Length = 817
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 251 LPSHSLHKDYQ*ASYPSGTTHDSIYQ*ASVYNDCLKSDYVYDKDPS 114
LP SLH+++Q Y + T + S+YND K D Y+ + S
Sbjct: 19 LPPQSLHQNWQDTEYVNTTCSSDMNSDMSMYNDD-KDDPFYEDEGS 63
>Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical
protein ZK662.3a protein.
Length = 780
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 251 LPSHSLHKDYQ*ASYPSGTTHDSIYQ*ASVYNDCLKSDYVYDKDPS 114
LP SLH+++Q Y + T + S+YND K D Y+ + S
Sbjct: 19 LPPQSLHQNWQDTEYVNTTCSSDMNSDMSMYNDD-KDDPFYEDEGS 63
>AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 817
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 251 LPSHSLHKDYQ*ASYPSGTTHDSIYQ*ASVYNDCLKSDYVYDKDPS 114
LP SLH+++Q Y + T + S+YND K D Y+ + S
Sbjct: 19 LPPQSLHQNWQDTEYVNTTCSSDMNSDMSMYNDD-KDDPFYEDEGS 63
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 158 NDCLKSDYVYDKDPSPVDQQQQ 93
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
protein F25E5.1 protein.
Length = 1062
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 62 YEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYEVN 241
Y I+ FI G+ W I N + H+ R +T+ W + ++R R+ + N
Sbjct: 897 YPIMTQRFIAQYRPGIILWHRSPIPNPQI--HHVRIITEMWPKNDFERTTRIPRKKFIKN 954
Query: 242 GL 247
G+
Sbjct: 955 GI 956
>Z82285-7|CAB05301.1| 548|Caenorhabditis elegans Hypothetical
protein T28F3.8 protein.
Length = 548
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 83 FIITAAVGLPGWGLYHIHN 139
F IT +VGL GWG ++ N
Sbjct: 269 FTITISVGLNGWGNFNYTN 287
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 188 RALYQRDMRLTGNPYE 235
RA Y+R+ + TG+PYE
Sbjct: 96 RAKYRREQKQTGHPYE 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,224,559
Number of Sequences: 27780
Number of extensions: 132938
Number of successful extensions: 305
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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