Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o09
(325 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 4.9
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 4.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 4.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 20 8.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 20 8.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 20 8.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 8.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 8.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 8.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 20 8.6
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 8.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 8.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 8.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 8.6
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 20 8.6
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 4.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -2
Query: 264 LSGIASKPFTS*GLPVSLISLW 199
+ G++ KP + G + +I++W
Sbjct: 155 VKGLSGKPLSINGALIRIIAIW 176
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 20.6 bits (41), Expect = 4.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -2
Query: 264 LSGIASKPFTS*GLPVSLISLW 199
+ G++ KP + G + +I++W
Sbjct: 121 VKGLSGKPLSINGALIRIIAIW 142
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 20.6 bits (41), Expect = 4.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -2
Query: 264 LSGIASKPFTS*GLPVSLISLW 199
+ G++ KP + G + +I++W
Sbjct: 31 VKGLSGKPLSINGALIRIIAIW 52
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 19.8 bits (39), Expect = 8.6
Identities = 4/5 (80%), Positives = 5/5 (100%)
Frame = +1
Query: 91 NCCCW 105
+CCCW
Sbjct: 10 SCCCW 14
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 244 LHNEKEKLLEERTSRKRYSRSREREQNSYK 273
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 244 LHNEKEKLLEERTSRKRYSRSREREQNSYK 273
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 255 LHNEKEKLLEERTSRKRYSRSREREQNSYK 284
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.8 bits (39), Expect = 8.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 146 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 235
L N + L +R SR Y R N Y+
Sbjct: 255 LHNEKEKLLEERTSRKRYSRSREREQNSYK 284
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 19.8 bits (39), Expect = 8.6
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -2
Query: 201 WYNARLHLSVSERL 160
W++ H+SV+++L
Sbjct: 156 WHSPEAHISVAQKL 169
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,073
Number of Sequences: 438
Number of extensions: 1929
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7093251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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