Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o08
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   4.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 434 KTLYLGNSSLMPTKSYIQIHERAHNARSTKFTSIPI 541
           K +Y GN+++     Y+ ++E    AR     S+P+
Sbjct: 20  KVMYNGNNNVTDLVEYVLLNEDNPCARKCVKDSVPM 55


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 361 ECIC*NLPAFRKTRHSFRINLGNGKDSVP 447
           + IC N P   +      + +G+G++S P
Sbjct: 7   KAICDNPPCDDEVESCIAVGVGSGRNSAP 35


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 282 VLQQLANKV*NMKMESDKL 338
           VL +L NK+  MKM+  +L
Sbjct: 295 VLSELVNKMKEMKMDKTEL 313


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 314 ILDFVC*LLQYIFLLTFH*TLVNHSQTGEYFYLHLL 207
           I+   C +L  +FLLT    L   +      YLH++
Sbjct: 131 IISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHII 166


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 314 ILDFVC*LLQYIFLLTFH*TLVNHSQTGEYFYLHLL 207
           I+   C +L  +FLLT    L   +      YLH++
Sbjct: 131 IISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHII 166


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 314 ILDFVC*LLQYIFLLTFH*TLVNHSQTGEYFYLHLL 207
           I+   C +L  +FLLT    L   +      YLH++
Sbjct: 131 IISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHII 166


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 15  LFSVCYFMI 41
           L SVCYFMI
Sbjct: 509 LTSVCYFMI 517


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 15  LFSVCYFMI 41
           L SVCYFMI
Sbjct: 509 LTSVCYFMI 517


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,701
Number of Sequences: 336
Number of extensions: 3012
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)