Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o08
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008308-1|AAH08308.2|  759|Homo sapiens cullin 4A protein.            30   4.8  
AY365124-1|AAR13072.1|  759|Homo sapiens cullin 4A protein.            30   4.8  
AL136221-5|CAI13795.1|  659|Homo sapiens cullin 4A protein.            30   4.8  
AL136221-4|CAM18410.1|  759|Homo sapiens cullin 4A protein.            30   4.8  
AF077188-1|AAD45191.1|  659|Homo sapiens cullin 4A protein.            30   4.8  
AB178950-1|BAD93235.1|  759|Homo sapiens cullin-4A protein.            30   4.8  

>BC008308-1|AAH08308.2|  759|Homo sapiens cullin 4A protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RITIFILSL-LFYDYEINCNNSTA*TVKDNNRKNMALSFFRTHIISRHARKQFYQNKRNS 178
           R  I I S+ LF D      NST  ++ D     M L  FRTHIIS     +  Q+K   
Sbjct: 144 RQMIMIRSIFLFLDRTYVLQNSTLPSIWD-----MGLELFRTHIIS----DKMVQSKTID 194

Query: 179 GYVVLI--PEIGEDADKNTLLSENGL 250
           G ++LI     GE  D++ L S  G+
Sbjct: 195 GILLLIERERSGEAVDRSLLRSLLGM 220


>AY365124-1|AAR13072.1|  759|Homo sapiens cullin 4A protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RITIFILSL-LFYDYEINCNNSTA*TVKDNNRKNMALSFFRTHIISRHARKQFYQNKRNS 178
           R  I I S+ LF D      NST  ++ D     M L  FRTHIIS     +  Q+K   
Sbjct: 144 RQMIMIRSIFLFLDRTYVLQNSTLPSIWD-----MGLELFRTHIIS----DKMVQSKTID 194

Query: 179 GYVVLI--PEIGEDADKNTLLSENGL 250
           G ++LI     GE  D++ L S  G+
Sbjct: 195 GILLLIERERSGEAVDRSLLRSLLGM 220


>AL136221-5|CAI13795.1|  659|Homo sapiens cullin 4A protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RITIFILSL-LFYDYEINCNNSTA*TVKDNNRKNMALSFFRTHIISRHARKQFYQNKRNS 178
           R  I I S+ LF D      NST  ++ D     M L  FRTHIIS     +  Q+K   
Sbjct: 44  RQMIMIRSIFLFLDRTYVLQNSTLPSIWD-----MGLELFRTHIIS----DKMVQSKTID 94

Query: 179 GYVVLI--PEIGEDADKNTLLSENGL 250
           G ++LI     GE  D++ L S  G+
Sbjct: 95  GILLLIERERSGEAVDRSLLRSLLGM 120


>AL136221-4|CAM18410.1|  759|Homo sapiens cullin 4A protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RITIFILSL-LFYDYEINCNNSTA*TVKDNNRKNMALSFFRTHIISRHARKQFYQNKRNS 178
           R  I I S+ LF D      NST  ++ D     M L  FRTHIIS     +  Q+K   
Sbjct: 144 RQMIMIRSIFLFLDRTYVLQNSTLPSIWD-----MGLELFRTHIIS----DKMVQSKTID 194

Query: 179 GYVVLI--PEIGEDADKNTLLSENGL 250
           G ++LI     GE  D++ L S  G+
Sbjct: 195 GILLLIERERSGEAVDRSLLRSLLGM 220


>AF077188-1|AAD45191.1|  659|Homo sapiens cullin 4A protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RITIFILSL-LFYDYEINCNNSTA*TVKDNNRKNMALSFFRTHIISRHARKQFYQNKRNS 178
           R  I I S+ LF D      NST  ++ D     M L  FRTHIIS     +  Q+K   
Sbjct: 44  RQMIMIRSIFLFLDRTYVLQNSTLPSIWD-----MGLELFRTHIIS----DKMVQSKTID 94

Query: 179 GYVVLI--PEIGEDADKNTLLSENGL 250
           G ++LI     GE  D++ L S  G+
Sbjct: 95  GILLLIERERSGEAVDRSLLRSLLGM 120


>AB178950-1|BAD93235.1|  759|Homo sapiens cullin-4A protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RITIFILSL-LFYDYEINCNNSTA*TVKDNNRKNMALSFFRTHIISRHARKQFYQNKRNS 178
           R  I I S+ LF D      NST  ++ D     M L  FRTHIIS     +  Q+K   
Sbjct: 144 RQMIMIRSIFLFLDRTYVLQNSTLPSIWD-----MGLELFRTHIIS----DKMVQSKTID 194

Query: 179 GYVVLI--PEIGEDADKNTLLSENGL 250
           G ++LI     GE  D++ L S  G+
Sbjct: 195 GILLLIERERSGEAVDRSLLRSLLGM 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,145,924
Number of Sequences: 237096
Number of extensions: 1495835
Number of successful extensions: 6405
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6405
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)