Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o08
(561 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /... 29 1.6
At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /... 29 1.6
At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /... 29 2.1
At3g47790.1 68416.m05206 ABC transporter family protein contains... 29 2.1
At5g62250.1 68418.m07816 microtubule associated protein (MAP65/A... 29 2.8
At5g25420.1 68418.m03016 xanthine/uracil permease family protein... 28 4.9
At3g58990.1 68416.m06575 aconitase C-terminal domain-containing ... 28 4.9
At2g05760.1 68415.m00620 xanthine/uracil permease family protein... 28 4.9
At1g49960.1 68414.m05606 xanthine/uracil permease family protein... 28 4.9
At5g65620.1 68418.m08255 peptidase M3 family protein / thimet ol... 27 6.5
At5g49990.1 68418.m06190 xanthine/uracil permease family protein... 27 6.5
At1g65550.1 68414.m07436 xanthine/uracil permease family protein... 27 6.5
At5g10540.1 68418.m01220 peptidase M3 family protein / thimet ol... 27 8.6
At3g47780.1 68416.m05205 ABC transporter family protein transpor... 27 8.6
At3g20040.1 68416.m02535 hexokinase, putative similar to hexokin... 27 8.6
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 27 8.6
At1g67890.1 68414.m07752 protein kinase family protein contains ... 27 8.6
>At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 378
Score = 29.5 bits (63), Expect = 1.6
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Frame = +2
Query: 110 SFFRTHIISRHARKQFYQNKRNSGYVVLIPEIGEDADKNTLLS--ENGLPEFNEMSIEKC 283
SF ++ + Q + N+ + I E+A +TLL +N F+ MS
Sbjct: 50 SFKLNCVMEKSVDGQTHSTVNNTTDSLNTMNIKEEASVSTLLVNLDNKFDPFDAMSTPLY 109
Query: 284 IATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQPLEKLDTLLELTWGMA 433
KQ ENG S ++A + L+K D T GMA
Sbjct: 110 QTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMA 159
>At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 464
Score = 29.5 bits (63), Expect = 1.6
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Frame = +2
Query: 110 SFFRTHIISRHARKQFYQNKRNSGYVVLIPEIGEDADKNTLLS--ENGLPEFNEMSIEKC 283
SF ++ + Q + N+ + I E+A +TLL +N F+ MS
Sbjct: 50 SFKLNCVMEKSVDGQTHSTVNNTTDSLNTMNIKEEASVSTLLVNLDNKFDPFDAMSTPLY 109
Query: 284 IATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQPLEKLDTLLELTWGMA 433
KQ ENG S ++A + L+K D T GMA
Sbjct: 110 QTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMA 159
>At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 449
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 203 IGEDADKNTLLS--ENGLPEFNEMSIEKCIATISKQSLEYENGVRQIEYSAPNCKNAFVE 376
I E+A +TLL +N F+ MS KQ ENG S ++A
Sbjct: 66 IKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALES 125
Query: 377 IFQPLEKLDTLLELTWGMA 433
+ L+K D T GMA
Sbjct: 126 LLAKLDKADRAFCFTSGMA 144
>At3g47790.1 68416.m05206 ABC transporter family protein contains Pfam
domain, PF00005: ABC transporter
Length = 901
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 EFNEMSIEKCIATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQPLEKLDTLLE-LTWGM 430
E +E +E+ + IS + + ++ P + E+F+ LEK T+ + WG+
Sbjct: 826 EEHEKEVEQLVHNISTNAKKIYRTAGTQKFELPKQEVKIGEVFKALEKAKTMFPVVAWGL 885
Query: 431 AKT 439
A T
Sbjct: 886 ADT 888
>At5g62250.1 68418.m07816 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 549
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 254 EFNEMSIEKCIATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQPLEKLDTLL 412
E ++++E I I + EN + QIEY A K + + LEK D L
Sbjct: 339 EEEDIAVENVIKAIESGDVNPENILEQIEYRAGKVKEEALSRKEILEKADKWL 391
>At5g25420.1 68418.m03016 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 419
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 510 ALCARSCICM*DLVGMRELLPRYR----VFAIPQVNSKRVSSFSKGWKISTNAFLQFGAE 343
A+ A S + + + G+ RY + A+ +V S+RV S + + + F +FGA
Sbjct: 275 AMMAASFVTLFESTGLFYASARYGKNVGLLAMTKVGSRRVIQISAAFMLFFSIFGKFGAF 334
Query: 342 YSICRTPFSYSRLCLLI 292
++ P S C+++
Sbjct: 335 FASIPLPIMASLYCIVL 351
>At3g58990.1 68416.m06575 aconitase C-terminal domain-containing
protein contains Pfam profile PF00694: Aconitase
C-terminal domain
Length = 253
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 182 YVVLIPEIGEDADKNTLLSENGLPEF 259
Y LIP I ED +K + NGLP+F
Sbjct: 94 YGTLIPSIPEDREKLGSFALNGLPKF 119
>At2g05760.1 68415.m00620 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 520
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = -1
Query: 468 GMRELLPRYRVFAIPQVNSKRVSSFSKGWKISTNAFLQFGAEYSICRTPFSYSRLCLLIV 289
G L+ + + +V S+RV S G+ I + +FGA ++ P Y+ L ++
Sbjct: 335 GSTVLVENVGLLGLTRVGSRRVVQVSAGFMIVFSTLGKFGAVFASIPVPI-YAALHCILF 393
Query: 288 AIHFSIDIS-LNSGKPFSDRRVFLSASSPISGIS 190
+ ++ +S L S R + ++ S GIS
Sbjct: 394 GLVAAVGLSFLQFTNMNSMRNLMITGLSLFLGIS 427
>At1g49960.1 68414.m05606 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 526
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -1
Query: 468 GMRELLPRYRVFAIPQVNSKRVSSFSKGWKISTNAFLQFGAEYSICRTPFSYSRLCLLIV 289
G L+ + + +V S+RV S G+ I + F +FGA + P + C+L
Sbjct: 339 GSTALVENTGLLGLTKVGSRRVVQISAGFMIFFSIFGKFGAVLASIPLPIFAALYCVLFA 398
Query: 288 AI 283
+
Sbjct: 399 YV 400
>At5g65620.1 68418.m08255 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 791
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +2
Query: 209 EDADKNTLLSENGLPEFNEMSIEKCIATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQP 388
E N LL + P F+ + I E + ++E S + + ++ +P
Sbjct: 93 ETLSSNPLLQDFDFPPFDSVDASHVRPGIRALLQHLEAELEELEKSV---EPTWPKLVEP 149
Query: 389 LEKLDTLLELTWGMAKTL 442
LEK+ L + WGM L
Sbjct: 150 LEKIVDRLTVVWGMINHL 167
>At5g49990.1 68418.m06190 xanthine/uracil permease family protein
similar to permease 1 [Zea mays] GI:7844006; contains
Pfam profile: PF00860 Xanthine/uracil permeases family
Length = 528
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -1
Query: 438 VFAIPQVNSKRVSSFSKGWKISTNAFLQFGAEYSICRTPFSYSRLCLLIVAI 283
+ A+ ++ S+RV S G+ I + +FGA ++ +P + CL +
Sbjct: 351 LLALTKIGSRRVVQISAGFMIFFSILGKFGAVFASIPSPIIAALYCLFFAYV 402
>At1g65550.1 68414.m07436 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 541
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 438 VFAIPQVNSKRVSSFSKGWKISTNAFLQFGAEYSICRTPFSYSRLCLLI 292
+ A+ ++ S+RV S + I + F +FGA ++ P S C+++
Sbjct: 366 LLAMTKIGSRRVIQISAAFMIFFSIFGKFGAFFASIPLPIMASLYCIVL 414
>At5g10540.1 68418.m01220 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 701
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 224 NTLLSENGLPEFNEMSIEKCIATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQPLEKLD 403
N LL P F+ + I + E + Q+E + + ++ ++ +PLEK+
Sbjct: 10 NPLLQNFDFPPFDSVDAHHVRPGIRALLQQLEAELEQLEKAV---EPSWPKLVEPLEKII 66
Query: 404 TLLELTWGMAKTL 442
L + WGM L
Sbjct: 67 DRLSVVWGMINHL 79
>At3g47780.1 68416.m05205 ABC transporter family protein transport
protein ABC-C, Homo sapiens, PIR2:S71363
Length = 935
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 NEMSIEKCIATISKQSLEYENGVRQIEYSAPNCKNAFVEIFQPLEKL-DTLLELTWGMAK 436
+E ++EK I +S + + + ++ P + E+FQ +EK WG+A
Sbjct: 855 HEQNVEKLIKDVSPNAKKIYHIAGTQKFELPKEEVRISEVFQAVEKAKSNFTVFAWGLAD 914
Query: 437 T 439
T
Sbjct: 915 T 915
>At3g20040.1 68416.m02535 hexokinase, putative similar to hexokinase
1 [Spinacia oleracea] Swiss-Prot:Q9SEK3
Length = 488
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 275 LLTFH*TLVNHSQTGEYFYLHL 210
LLTF L N S+TG Y+ LHL
Sbjct: 81 LLTFVDDLPNGSETGTYYALHL 102
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 238 RQESIFICIFSDLWDKYDISRIPFILIKL 152
R S+F C LW+K ++R F + L
Sbjct: 362 RSHSVFTCTIESLWEKDSLTRSRFARLNL 390
>At1g67890.1 68414.m07752 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 765
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 341 YSAPNCKNAFVEIFQPLEKLDTLLELTWGMAKTLYLGNSSL 463
+S P C+ +F E+ L +L + + A+ + NSSL
Sbjct: 722 HSEPQCRPSFQELMDKLRELQRKYTIQFQAARAASIDNSSL 762
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,955
Number of Sequences: 28952
Number of extensions: 234216
Number of successful extensions: 579
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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