Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o07
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.1  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    23   2.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 85  YKCSDLELIILIPFVGK 35
           Y CS  +LI+ IPF G+
Sbjct: 255 YGCSPKKLIVGIPFYGR 271


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 258 IVHQYTALWLEQSCYMSDAVR 196
           + HQ   LW +Q  Y  D++R
Sbjct: 56  VTHQAYELWFKQIIYELDSIR 76


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 258 IVHQYTALWLEQSCYMSDAVR 196
           + HQ   LW +Q  Y  D++R
Sbjct: 56  VTHQAYELWFKQIIYELDSIR 76


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 258 IVHQYTALWLEQSCYMSDAVR 196
           + HQ   LW +Q  Y  D++R
Sbjct: 56  VTHQAYELWFKQIIYELDSIR 76


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +2

Query: 350 IDFRFGCSQEGL*DMEQKYCFDSSTANVQICSATE 454
           ID +  C++  + + E +YC  +   N+ + +  E
Sbjct: 484 IDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVE 518


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 277 VVFESTYCPSIYSFVVGAELLYE 209
           VV + TYC   +  V G + LY+
Sbjct: 35  VVGDETYCDRYWECVNGQQELYD 57


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 515 C*GRCASRNSVSGA 556
           C GRCAS   VSG+
Sbjct: 65  CIGRCASYIQVSGS 78


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 273 FLNLHIVHQYTALWL 229
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 273 FLNLHIVHQYTALWL 229
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 273 FLNLHIVHQYTALWL 229
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 273 FLNLHIVHQYTALWL 229
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,672
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)