Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o07
(622 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 64 1e-10
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 57 1e-08
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 54 7e-08
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 51 9e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 47 1e-05
SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) 39 0.004
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 31 1.00
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 31 1.00
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 30 1.3
SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47) 29 4.0
SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19) 28 7.0
SB_51202| Best HMM Match : ThiS (HMM E-Value=3.2) 28 7.0
SB_36740| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_24251| Best HMM Match : ubiquitin (HMM E-Value=0.1) 27 9.3
SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19) 27 9.3
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 27 9.3
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Frame = +3
Query: 246 IDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAY--KTWSKSTVLTR 419
I Q+ D+ I++ NPAT EVI RVP A Q E+ A+ AA++A+ WS+ + R
Sbjct: 48 IGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDDSPWSRIKPVER 107
Query: 420 QQLMFKFARLLRENQSKLAAKITEEQGKTIADAEG-DVLRGIQSVEHCCSITSLQLGDSI 596
Q+L++ FA L+ +N + LA + + GK+ AE D+ + + + + G ++
Sbjct: 108 QKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFATKIEGRTV 167
Query: 597 Q 599
Q
Sbjct: 168 Q 168
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +3
Query: 195 LVLRRSYSSSAPTTKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAA 374
+ L RS SS K Y+ G+++D +T + NPAT E +G+V E A+ A
Sbjct: 51 MALFRSQSSLI-RHKGYVGGKWLDGDST--FPVYNPATGEELGQVANMGAKEGELAVQEA 107
Query: 375 KRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQ 497
+A++TW K+T R + + K+ +L+ ++Q++LA +T EQ
Sbjct: 108 YKAFQTWKKTTAKERSEKLRKWFQLILQHQNELAELLTTEQ 148
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +3
Query: 204 RRSYSSSAPTTKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRA 383
+ +Y S +L+I+ ++VD + NP T E I + E ++++ A+ AAK A
Sbjct: 321 QHTYEGSG-AVELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEA 379
Query: 384 YK---TWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDV 530
+K W R +L++K A+L+ + + LA+ T + GK +D+ GD+
Sbjct: 380 FKLGSAWRTMDASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDM 431
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/121 (23%), Positives = 60/121 (49%)
Frame = +3
Query: 243 YIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 422
YI G++V+ + ++ ++VIG +A + + +A+ AA + W KS + R
Sbjct: 9 YIAGEWVEGNKGSVANISPADISDVIGHYAQADKAQTEAAIAAAAAGQREWQKSGLEQRY 68
Query: 423 QLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQN 602
++ L + +L A + E+GKT+A+ G+ R Q + + Q+G++ ++
Sbjct: 69 SVLMAIGDELIARKDELGAILAREEGKTLAEGVGETYRSGQFFHYYAAEVLRQMGETAES 128
Query: 603 I 605
+
Sbjct: 129 V 129
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/89 (28%), Positives = 52/89 (58%)
Frame = +3
Query: 243 YIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 422
+I+G+++ +I+ +P+ EV +VP++ ++ + A+ AA A+K+WS S+ R
Sbjct: 14 FINGEFLSCD--RYIDSYDPSRGEVYCKVPDSGKEHVDLAVAAANAAFKSWSVSSPAYRA 71
Query: 423 QLMFKFARLLRENQSKLAAKITEEQGKTI 509
+ + K A L+ + + A + +QGKT+
Sbjct: 72 ERLRKLADLIEDRLEEFAQAESRDQGKTV 100
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/105 (26%), Positives = 55/105 (52%)
Frame = +3
Query: 231 TTKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTV 410
T K+YI G + NP+ EVI +V + + ++ A++AA +A W K
Sbjct: 1147 TYKMYIGGAQKRPDGNYSRPILNPS-GEVIAQVADGNRKDIREAVEAAHKAASGWGKRAA 1205
Query: 411 LTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQ 545
R Q+++ A L ++++AA+I++ G+++ + + +V IQ
Sbjct: 1206 HNRAQIVYYLAENLEMRRAEVAARISDMTGQSLDECKAEVDASIQ 1250
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/68 (22%), Positives = 37/68 (54%)
Frame = +3
Query: 312 EVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITE 491
EV+ + ++ A+ AA+ A+++WSK R + ++ AR ++++ +A +
Sbjct: 668 EVLASTTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESM 727
Query: 492 EQGKTIAD 515
+ GK++ +
Sbjct: 728 DNGKSVRE 735
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Frame = +3
Query: 195 LVLRRSYSSSA--PTTKL-YIDGQY---VDSKTTNWIELTNPATNEVIGRVPEATQDELT 356
LV R SS A P L ++DG + + + + +T+P+T + V + + E+
Sbjct: 257 LVPRPELSSDACTPCQNLNFVDGHRCNPITEEISGQMFITDPSTGHISCEVKGSGKTEVK 316
Query: 357 SALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLR 536
A+ +A++A+KTWS + R +++ +RL+R+ + +A + GK +A DV
Sbjct: 317 RAVLSARKAFKTWSVLSGSERGRILGDASRLVRKRREDIAKVEVHDNGKPFHEALWDVDN 376
Query: 537 GIQSVEHCCSITSLQLGDSIQ 599
+E+ + G +Q
Sbjct: 377 VADVLEYYAGVAPTLSGQHVQ 397
>SB_18188| Best HMM Match : SRP54 (HMM E-Value=0)
Length = 410
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 531 LRGIQSVEHCCSITSLQLGDSIQNIAXDMD 620
LR + VEH CSITSLQ+G+++ ++ DMD
Sbjct: 365 LRTEEVVEHTCSITSLQMGETMPSVTKDMD 394
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 237 KLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAK 377
+L+I+G++VDS NP V+ +V AT +++ A+DAAK
Sbjct: 710 QLFINGEFVDSHHGKTFNTINPTDGTVLAQVSLATHEDVDDAVDAAK 756
>SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 31.1 bits (67), Expect = 0.75
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Frame = +3
Query: 210 SYSSSAPTTKL-----YIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSA---- 362
SY S P T L +DG+ DSKT W+ IGR+P++ L
Sbjct: 348 SYIVSEPNTVLEQLHSLLDGKLKDSKTKRWVVSAMGKLVAQIGRIPDSVAGALAKCRADG 407
Query: 363 -LDAAKRAYKTWSKSTV-----LT-RQQLMFKFARLL---RENQSKLAAKITEEQG 500
+D + + + +V LT +++FK AR L R+NQ+ L +T +G
Sbjct: 408 DVDLRQSVFSCFDWGSVPALPLLTFSHRVVFKTARFLFRGRKNQALLLRAMTGFEG 463
>SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 243 YIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWS 398
+I+G++V + ++ +P T EVI P++ + +A+ AAK A W+
Sbjct: 10 FINGEFVPGEDGVYMNDLSPTTGEVICTFPDSNVVDTENAIRAAKSAGIIWA 61
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.7 bits (66), Expect = 1.00
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 435 KFARLLRENQSKLAAKITEEQGKTIADAEGDVLR--GIQSVEHCCSITSLQLGDS 593
++ LREN+ KL AKI E + K + A+ ++ IQ VE S + GDS
Sbjct: 1012 EYVEELRENRRKLEAKINELEQKLASQADIIPMQPIQIQQVESVQSAPDMDFGDS 1066
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 30.7 bits (66), Expect = 1.00
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 297 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKST 407
+PAT + +G+V + A++AA + ++TW K+T
Sbjct: 115 SPATGDELGQVSNMGAQQWELAVNAAYKEFQTWKKTT 151
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -1
Query: 328 TLPITSLVAGLVSSIQLVVFESTYCPSIYSFVVGAELLYERRSTS 194
T PIT + L+S + L VF+ Y PS+YS + + + ER S S
Sbjct: 127 TSPITLV---LISRLALGVFQGIYYPSLYSLLAKSLPISERSSCS 168
>SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 327 VPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQG 500
+P T+ D K T+L LMF ++ +R N ++ K+T+ G
Sbjct: 791 IPFDTERHYHPEFDGYHPGIKVKQADTILIGYPLMFNMSKQIRRNDLEMYEKVTDRNG 848
>SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47)
Length = 715
Score = 28.7 bits (61), Expect = 4.0
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Frame = +3
Query: 228 PTTKLYIDGQYVDSKTTNWIELTNPATNEV--------IGRVPEATQDEL-TSALDAAKR 380
P KL+ + + TN T+P +NE+ + ATQ +L TS A K
Sbjct: 417 PQMKLFDNSSALQENATNSQAATSPLSNELQVQQAAGSQAQQSSATQPQLETSVQPADKG 476
Query: 381 AYKTWSKSTVLTRQQLMFKFARLLRENQ-----SKLAAKITEEQGKTIADAEG 524
K S ST T Q++ L++ Q +LAA + ++ G I D G
Sbjct: 477 GTKEQSAST--TPQEMPEVLGEQLQQGQYNPGAQQLAATLPQQSGTLITDNHG 527
>SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19)
Length = 262
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 330 PEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFA 443
P++ + T A R+YK W S + TR+Q++ + A
Sbjct: 22 PDSGNNMSTVARAVRTRSYKCWCLSHIFTRKQVLIRTA 59
>SB_51202| Best HMM Match : ThiS (HMM E-Value=3.2)
Length = 476
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +2
Query: 125 RSVIINKLNHGIGDLKVIKI*IPARTASLI*QLCSNHKAVY 247
+S+ I ++ + + +I++ P +T ++I +CS H A+Y
Sbjct: 386 QSIAIIRVVYPAQSIAIIRVVYPGQTIAIIRVVCSGHIAIY 426
>SB_36740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 533 SRNSVSGALL*HHIASARRQHPKHRXRH 616
SRN V+G H I S +++ P+HR H
Sbjct: 24 SRNHVTGLSRNHVIGSVKQRSPRHRVCH 51
>SB_24251| Best HMM Match : ubiquitin (HMM E-Value=0.1)
Length = 275
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +3
Query: 168 LKLLKSESQLVLRRSYSSSAPTTKLYIDGQYVDSKTTNWIELTNPATNEVIGRVPEATQD 347
L L ++Q+ L ++S T + ID W E TN A N+V+ + D
Sbjct: 28 LDLFSFDNQIPL--TFSVPTSQTAISIDDSDDSDVDQGW-ERTNEAENDVVDLANSSEDD 84
Query: 348 ELTSAL 365
EL AL
Sbjct: 85 ELDQAL 90
>SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19)
Length = 951
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 101 FAPCPPTSRSVIINK 145
+ PCPP SRSV+I K
Sbjct: 529 YRPCPPKSRSVVIPK 543
>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
Length = 2568
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 150 IMASAILKLLKSESQLVLRRSYSSSAPTTKLYIDGQYVDSKTTNWIELTNPATNEVIGRV 329
+M LKL + + + SY++ + + +DGQ T +EL NPA ++
Sbjct: 1450 VMDMPALKLAYMDGRDTIPESYTTVSSSDSNGVDGQGGSLTTELAVELINPAACCLV-TD 1508
Query: 330 PEATQDEL 353
P TQ+E+
Sbjct: 1509 PVPTQEEI 1516
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,960,077
Number of Sequences: 59808
Number of extensions: 340431
Number of successful extensions: 878
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -