Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o04
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 61 2e-10
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 46 3e-06
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 42 9e-05
SPBC11C11.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 29 0.49
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 28 1.1
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 27 2.6
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy... 26 4.5
SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces pomb... 22 5.9
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
SPAC2F3.17c |lsm6||U6 snRNP-associated protein Lsm6|Schizosaccha... 26 6.0
SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|c... 26 6.0
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 26 6.0
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 25 7.9
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 25 7.9
SPAC27D7.05c |apc14|omt1|anaphase-promoting complex subunit Apc1... 25 7.9
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 60.9 bits (141), Expect = 2e-10
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Frame = +3
Query: 312 INNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGE 491
I N ++FGG ++ N L++ NT S VW++ A GA P +S +K
Sbjct: 142 IGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSGRYGHTISCLGSK-- 199
Query: 492 LWIFGGEFTSPSETQFYHYKDLWCFSF-----VERKWEKVVAPNGPSP-RSGHRMALLSR 653
+ +FGG Y++ DL CF + +WE N P P R+GH S
Sbjct: 200 ICLFGGRLLD------YYFNDLVCFDLNNLNTSDSRWELASVVNDPPPARAGHVAFTFSD 253
Query: 654 KLYVFXG 674
KLY+F G
Sbjct: 254 KLYIFGG 260
Score = 58.0 bits (134), Expect = 1e-09
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +3
Query: 273 PSSRAYATLTPHPINNELVLFGGE----YHNGQKTETYNDLFIYNTVSNVWRQLKAPGAP 440
PS R T++ + +++ LFGG Y N N+L NT + W P
Sbjct: 185 PSGRYGHTISC--LGSKICLFGGRLLDYYFNDLVCFDLNNL---NTSDSRWELASVVNDP 239
Query: 441 PPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPN-GPS 617
PP A T ++K L+IFGG F++ DLWC+ + W KV P+
Sbjct: 240 PPARAGHVAFTFSDK--LYIFGGT----DGANFFN--DLWCYHPKQSAWSKVETFGVAPN 291
Query: 618 PRSGHRMALLSRKLYVFXGYCDDG 689
PR+GH +++ LYVF G DG
Sbjct: 292 PRAGHAASVVEGILYVFGGRASDG 315
Score = 55.6 bits (128), Expect = 6e-09
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 237 RYAASEKVLEKPPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWR 416
R+ + V + PP+ + T +++L +FGG +NDL+ Y+ + W
Sbjct: 229 RWELASVVNDPPPARAGHVAFT---FSDKLYIFGGT----DGANFFNDLWCYHPKQSAWS 281
Query: 417 QLKAPG-APPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEK 593
+++ G AP PR+ H A +G L++FGG S+ F + DL+ F + W K
Sbjct: 282 KVETFGVAPNPRAGHAASVV---EGILYVFGGR---ASDGTFLN--DLYAFRLSSKHWYK 333
Query: 594 VV-APNGPSPRSGHRMALLSRKLYVFXG 674
+ P PSPRS H ++ L + G
Sbjct: 334 LSDLPFTPSPRSSHTLSCSGLTLVLIGG 361
Score = 34.3 bits (75), Expect = 0.017
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 411 WRQLKAPGAPP--PRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERK 584
W +L G+ PR +H + E++IFGG S S+ + DLW + +
Sbjct: 66 WSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGG-VASDSQPK----NDLWVLNLATSQ 120
Query: 585 WEKVVA-PNGPSPRSGHRMALLSRKLYVFXG 674
+ + + PSPR GH L+ VF G
Sbjct: 121 FTSLRSLGETPSPRLGHASILIGNAFIVFGG 151
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 45.6 bits (103), Expect = 7e-06
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 441 PPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNG-PS 617
P R H V + +++FGG + T L+ ++F +W V + PS
Sbjct: 111 PARVGHSIV---CSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPS 167
Query: 618 PRSGHRMALLSRKLYVFXGYC 680
PR+GH M L+ KL++F G C
Sbjct: 168 PRTGHSMLLVDSKLWIFGGEC 188
Score = 39.9 bits (89), Expect = 3e-04
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 435 APPPRSAHQAVSTPANKGELWIFGGEF-TSPSETQFYHYKDLWCFSFVERKWEKVVAPNG 611
+PPPRS H S +G++++ GG T P DLW F W +V +
Sbjct: 244 SPPPRSNH---SVTLVQGKIFVHGGHNDTGP-------LSDLWLFDLETLSWTEVRSIGR 293
Query: 612 -PSPRSGHRMALLSRKLYVFXGYCDDG 689
P PR GH+ + +Y++ G + G
Sbjct: 294 FPGPREGHQATTIDDTVYIYGGRDNKG 320
Score = 39.5 bits (88), Expect = 5e-04
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +3
Query: 270 PPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGA-PPP 446
PP S TL + ++ + GG HN T +DL++++ + W ++++ G P P
Sbjct: 246 PPRSNHSVTL----VQGKIFVHGG--HND--TGPLSDLWLFDLETLSWTEVRSIGRFPGP 297
Query: 447 RSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAP 605
R HQA + ++I+GG + + +LW F++ +++W V P
Sbjct: 298 REGHQATTIDDT---VYIYGGR-----DNKGLILNELWAFNYSQQRWSLVSNP 342
Score = 35.9 bits (79), Expect(2) = 3e-06
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 375 NDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIFGGE 512
N L+ YN SN W + P PR+ H + + +LWIFGGE
Sbjct: 144 NSLYAYNFKSNQWNLVSTQSPLPSPRTGHSMLLVDS---KLWIFGGE 187
Score = 30.3 bits (65), Expect(2) = 3e-06
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 564 FSFVERKWEK-VVAPNGPSPRSGHRMALLSRKLYVFXGYCDDG 689
F + WE + + P PRS H + L+ K++V G+ D G
Sbjct: 228 FDETDWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTG 270
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 41.9 bits (94), Expect = 9e-05
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +3
Query: 276 SSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSA 455
S R+ + +P +N + L+GG +G KT ++D +IYN ++W G P R
Sbjct: 261 SRRSGHQMVYNPKDNCIYLYGG--WDGVKT--FSDFWIYNVDKDLWIMENEYGIPGERVC 316
Query: 456 HQAVSTPANKGELWIFGGEFTSPSETQF--YHYKDLWCFSFVERKW 587
H+ V ++ +L++ G F S ET+ D W F ++ W
Sbjct: 317 HRMV-IDTSQQKLYLLGNYFGSSRETEVPPDARTDFWEFDISKKVW 361
>SPBC11C11.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 29.5 bits (63), Expect = 0.49
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 210 AEIEREEAKRYAASEKVLEKPPSSRAYATLTPHPINNELVLFGGE 344
AEI RE A A+EK +PP + P+ N ++V+ E
Sbjct: 13 AEIVREHAPEQTAAEKAAPQPPEVEEVLSEEPYQKNEKVVVLDEE 57
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = -2
Query: 661 YNFRLRSAILCPERGEGPLGATTFSHF----LSTNEKHHKSL 548
+NF+LR ++L P+ + P+ T F+H S+ EK K L
Sbjct: 753 HNFQLRISVLGPDSDQLPISHTCFNHLCIWEYSSREKLKKKL 794
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 429 PGAPPPRSAHQAVSTPANKGEL 494
PG P P S H S PA G L
Sbjct: 224 PGTPKPTSLHPVFSNPATNGML 245
>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 516
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3
Query: 396 TVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFG---GEFTSPSETQFYHYKDLWC 563
++S VW Q P + TP K W+FG E P T + +++D +C
Sbjct: 86 SLSRVWGQFNRAHLPT------FLRTPGFKLYAWVFGCNLSELKDPDLTHYRNFQDFFC 138
>SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 22.2 bits (45), Expect(2) = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 247 HQRRSSKSHH 276
HQR+S +SHH
Sbjct: 330 HQRQSERSHH 339
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 9/46 (19%), Positives = 20/46 (43%)
Frame = +1
Query: 259 SSKSHHPPERTQRSPHIQSIMSLCCLVENTTTDKRQKHTTIYLYIT 396
S + +PP T+ + + ++ +CC+ T +LY +
Sbjct: 374 SQRYPYPPNATKPATPLGYMLDICCIGIQHNMKLNLSATMYFLYFS 419
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 25.8 bits (54), Expect = 6.0
Identities = 18/79 (22%), Positives = 31/79 (39%)
Frame = +3
Query: 222 REEAKRYAASEKVLEKPPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTV 401
+E K Y E S++ A + N ++ YHN + + +D+ I N++
Sbjct: 85 KEFMKEYVDRENKFSNETISKSSAAALMTSMENFILFTNPVYHNKLQVPSKSDMEIANSL 144
Query: 402 SNVWRQLKAPGAPPPRSAH 458
K G P SA+
Sbjct: 145 KITQPAEKNSGTANPISAY 163
>SPAC2F3.17c |lsm6||U6 snRNP-associated protein
Lsm6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 75
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 342 EYHNGQKTETYNDLFI 389
EY NG+KT Y D FI
Sbjct: 47 EYVNGKKTNVYGDAFI 62
>SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 615 KDHWVLPPFPIFSQQMRSTTNLYND 541
K++WVL FP+F TT +ND
Sbjct: 273 KEYWVLLLFPMFFSSNWFTTYQFND 297
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1111
Score = 25.8 bits (54), Expect = 6.0
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 430 PVPRLRVVPIKLSPPLLTKVSFGYLEENSRVHQKHNFIIIKICGASHLLRENGKRW*HPM 609
P+ LR K P + + Y+ N +H H F + K+ + R NGKR PM
Sbjct: 56 PIDELR----KKYPKFFGNMPYPYM--NGALHLGHAFTLSKVEFTTAFERLNGKRVLFPM 109
Query: 610 VLH 618
H
Sbjct: 110 GFH 112
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 297 LTPHPINNELVLFGGEYHNGQKTETYNDLFI-----YNTV-SNVWRQL 422
LT I + + G ++NG K ET D+F N++ S+VW++L
Sbjct: 559 LTSENIETPVPVPNGNWYNGVKHETATDIFTTCHDGNNSLKSSVWKEL 606
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 216 IEREEAKRYAASEKVLEKPPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYN 395
I + + +S K LEK S TPHP + L G YH ++ +I +
Sbjct: 338 ISSQNKEELPSSIKYLEKTIMSDQ---ATPHPFSKSLSEKGSSYHKSLTSDFAMKHYIKS 394
Query: 396 TVSNV 410
T+ ++
Sbjct: 395 TIRSM 399
>SPAC27D7.05c |apc14|omt1|anaphase-promoting complex subunit
Apc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +3
Query: 390 YNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKG-ELW----IFGGE 512
Y T NV+++L G P P + + A+K E W + GGE
Sbjct: 13 YRTFGNVFQRLSMSGNPKPLAKKPLLLPEASKAIEFWNYRDVIGGE 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,730,470
Number of Sequences: 5004
Number of extensions: 56729
Number of successful extensions: 195
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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