Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o04
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46123| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 48 6e-06
SB_48121| Best HMM Match : Kelch_1 (HMM E-Value=0.023) 42 5e-04
SB_43498| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_16058| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_1029| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34) 40 0.001
SB_32939| Best HMM Match : Kelch_2 (HMM E-Value=1.7e-18) 40 0.001
SB_37532| Best HMM Match : Kelch_1 (HMM E-Value=1.8e-09) 38 0.010
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.014
SB_30626| Best HMM Match : Kelch_1 (HMM E-Value=1e-17) 37 0.014
SB_52865| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_55378| Best HMM Match : Connexin50 (HMM E-Value=1.8) 32 0.39
SB_5543| Best HMM Match : Kelch_1 (HMM E-Value=1.4e-06) 32 0.39
SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_19780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13788| Best HMM Match : rve (HMM E-Value=0.00016) 29 3.6
SB_50134| Best HMM Match : Sorting_nexin (HMM E-Value=6.3) 29 4.8
SB_53882| Best HMM Match : Kelch_1 (HMM E-Value=0.052) 28 6.4
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 28 8.4
>SB_46123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +3
Query: 345 YHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGEFTSP 524
Y + ++D+ +T S W ++ G P RS H S +GE+W+ GG + +P
Sbjct: 510 YGGSKNKRWFSDVHKLDTTSWTWSLVQTVGKAPTRSYH---SCTLYRGEMWVIGGVYPNP 566
Query: 525 SETQFYHYKDLWCFSFVERKWEK-VVAPNGPSPRSGHRMALLSRKLYVFXGY 677
D+ + + W + + + P+PRSGH LL KL +F G+
Sbjct: 567 DPQPDGCSNDVHVLNLSSKNWYMPITSGDKPTPRSGHSSCLLDSKLVIFGGW 618
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 INNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPP-PRSAHQAVSTPANKG 488
++++LV+FGG YND+F+ + + + G P PRS H +V P NK
Sbjct: 608 LDSKLVIFGG----WDAPTCYNDMFLLDMTFIEFSKPPVTGTTPSPRSWHASVQLPGNK- 662
Query: 489 ELWIFGG 509
+ I GG
Sbjct: 663 -MLISGG 668
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 48.4 bits (110), Expect = 6e-06
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Frame = +3
Query: 312 INNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGE 491
I +V+FGG ++L +YNT +N W G PP A A +
Sbjct: 29 IRELMVVFGGGNEG-----IVDELHVYNTATNQWFVPAVRGDIPPGCA--AYGFICDGTR 81
Query: 492 LWIFGG--EFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSPRSGHRMALLSRKLYV 665
L +FGG E+ S + W + ++ K K P PR GH L+ K Y+
Sbjct: 82 LILFGGMVEYGRYSNEMYELQASRWEWKKLKPKPPKTAGVPPPCPRLGHSFTLIGHKAYL 141
Query: 666 FXGYCDDGRD 695
F G +D D
Sbjct: 142 FAGLANDSDD 151
Score = 31.9 bits (69), Expect = 0.52
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Frame = +3
Query: 375 NDLFIYNTVSNVWRQLKAPGA----PPPRSAHQAVS---TPANKGELWIFGGEFTSPSET 533
NDL+I + N + P P PR +H V+ + K L ++GG
Sbjct: 161 NDLYIIDVRPNSSLHWECPQTFGTIPSPRESHTCVAHTHSDGKKARLIVYGG-------M 213
Query: 534 QFYHYKDLWCFSFVERKWEKVVAPNG-PSPRSGHRMALLSRKLYVFXGY 677
DL+ W K P PRS H K+YVF G+
Sbjct: 214 SGCRLGDLYQLDIDSMVWSKPTVKGAVPLPRSLHSATTCGSKMYVFGGW 262
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 582 KWEKVVAPNG--PSPRSGHRMALLSRKLYVFXG 674
KW+K+ G P PR GHR + + VF G
Sbjct: 6 KWKKITNSTGPMPRPRHGHRAVAIRELMVVFGG 38
>SB_48121| Best HMM Match : Kelch_1 (HMM E-Value=0.023)
Length = 1169
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/65 (36%), Positives = 30/65 (46%)
Frame = +3
Query: 489 ELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSPRSGHRMALLSRKLYVF 668
+L IFGGEFTS +ET LW F W + GP R H + L++F
Sbjct: 658 KLIIFGGEFTSSTET------PLWMFDTTSLSWSRSF-QRGPVNRKSHSAVVCGDCLFIF 710
Query: 669 XGYCD 683
GY D
Sbjct: 711 GGYID 715
>SB_43498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 348 HNGQK-TETYNDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIFGG 509
H G ++ ++DLF +NT +N W +L G PP R+AH AV A L++FGG
Sbjct: 157 HGGMAGSDMFDDLFQFNTENNSWTKLNPTGDVPPSRTAHAAV---AIGHRLYLFGG 209
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +3
Query: 306 HPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPP-PRSAHQAVSTPAN 482
HP V+FGG Q+ + ND+ + +T ++ W QL G P R H V+ +
Sbjct: 100 HP--ERFVVFGG----AQQDQNLNDVQVIDTETDSWSQLTTSGEQPCCRHGHIMVAIGTS 153
Query: 483 KGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNG--PSPRSGHRMALLSRK 656
+++ GG S + DL+ F+ W K + P G P R+ H + +
Sbjct: 154 ---IFLHGGMAGSDM------FDDLFQFNTENNSWTK-LNPTGDVPPSRTAHAAVAIGHR 203
Query: 657 LYVFXG 674
LY+F G
Sbjct: 204 LYLFGG 209
>SB_16058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 435 APPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKV-VAPNG 611
AP PR +H ++ ++IFGG SPS T F D++ + KW ++ ++ +
Sbjct: 84 APSPRFSHGCC---VSRNSMYIFGG--CSPSNTAF---NDVFELDLKDHKWTRLRISGSP 135
Query: 612 PSPRSGHRMALLSRKLYVFXGYCDDGR 692
P P+ M +++ VF G+C R
Sbjct: 136 PPPKECATMVAHKKRVIVFGGWCQPSR 162
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Frame = +3
Query: 318 NELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELW 497
N + +FGG +ND+F + + W +L+ G+PPP + + A+K +
Sbjct: 98 NSMYIFGG---CSPSNTAFNDVFELDLKDHKWTRLRISGSPPP--PKECATMVAHKKRVI 152
Query: 498 IFGGEFTSPSET----QFYHYKDLWCFSFVERKW----EKVVAPN--GPSPRSGHRMALL 647
+FGG + PS T + D+ W K VA P R+GH ++
Sbjct: 153 VFGG-WCQPSRTGCVSNARFHNDVHILDTTTLTWSSPCSKGVATGTIQPCERAGHAACIV 211
Query: 648 SRKLYVFXG 674
++ VF G
Sbjct: 212 EDRMIVFGG 220
>SB_1029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = +3
Query: 273 PSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQL---KAPGAPP 443
PS+R +++ P + +V+FGG + T D +I++ S W ++ + G P
Sbjct: 18 PSARRDSSIGYDPNTDRVVIFGG-----RSDATLGDTWIFDLTSKTWSKVTETRVNGKPV 72
Query: 444 PRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKW 587
P V +N G L+I GEF+ F Y D+ F++ +W
Sbjct: 73 PEPRFSMVYG-SNGGHLYISTGEFSGGGTKAF--YSDILRFNYSTSQW 117
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Frame = +3
Query: 324 LVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIF 503
L + GE+ G Y+D+ +N ++ W L+ P+S+ + + G +
Sbjct: 88 LYISTGEFSGGGTKAFYSDILRFNYSTSQWSLLE------PKSSVRPEERYGSGGGIHPD 141
Query: 504 GGEFTSPSETQFYHYKDLWCFSFVERKWEKVVA------PNGPSPRSGHRMALLSRKLYV 665
G F Y + + F KWE+ A P P R H A+ +R V
Sbjct: 142 GDGFFVTHGFADIRYSNTFKFDLETMKWEERFAGTNSYNPAYPHARCLHGSAMTARDELV 201
Query: 666 FXGYCDDG 689
G C G
Sbjct: 202 LYGGCLGG 209
>SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34)
Length = 405
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = +3
Query: 315 NNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGEL 494
+ +L +F G G Y F + T + + P PR H+AV KG
Sbjct: 178 DQDLYVFAGT--TGHMFNCYLSKFSFKTKEWKYVSTQNESVPFPRYRHEAVDY---KGSF 232
Query: 495 WIFGGEFTSPSETQFYHYKDLWCFSFVERKWE----KVVAPNG-PSPRSGHRMALLSRKL 659
++ GG S +FY+ + F + KW+ V +G P R H L +
Sbjct: 233 YVIGGGMGSTDPQEFYNLDKVHAFCYQTNKWQVYECLVSQEHGIPPRRRCHGCVLYKDAV 292
Query: 660 YVFXGY 677
Y+ GY
Sbjct: 293 YICGGY 298
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 435 APPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGP 614
+P PRS H+ V+ N +++FGG SE F ++LW F+ + W +V+ GP
Sbjct: 22 SPLPRSGHRCVADDRN---VYVFGGYSPHYSEKLF---RELWRFNIASQCWSRVIT-TGP 74
Query: 615 SPRSGHRMALLSRK--LYVFXG 674
P S +L K L V+ G
Sbjct: 75 FPSSVCSSCVLLNKGNLIVYGG 96
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 612 PSPRSGHRMALLSRKLYVFXGY 677
P PRSGHR R +YVF GY
Sbjct: 23 PLPRSGHRCVADDRNVYVFGGY 44
>SB_32939| Best HMM Match : Kelch_2 (HMM E-Value=1.7e-18)
Length = 493
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 318 NELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELW 497
+++V+FGG + K++ Y + T S W L+ PP Q+ A+KG L+
Sbjct: 137 DKVVVFGGVINRKGKSKAYTWILDLKTTS--WTALQDDN--PPVRVKQSYWCDASKGILY 192
Query: 498 IFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVV---APNGPSPRSGHRMALLSRKLYVF 668
I+GG+ + D+W FSF + W + P P R + LY+F
Sbjct: 193 IYGGDNGAKI------IDDMWKFSFKDMAWSSITFSKLPTFPGSRFSATAWENNGTLYLF 246
Query: 669 XG 674
G
Sbjct: 247 GG 248
Score = 37.1 bits (82), Expect = 0.014
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Frame = +3
Query: 183 GEEDIAKVIAEIEREEAKRYAASEKVLEKPPS---SRAYATLTPHPINNELVLFGGEYHN 353
G ++ AK+I ++ + K A S K P+ SR AT + N L LFGG+
Sbjct: 195 GGDNGAKIIDDMWKFSFKDMAWSSITFSKLPTFPGSRFSATAWEN--NGTLYLFGGQGEL 252
Query: 354 GQKTETYNDLFIYNTVSNVWRQLKA-----------------PGAPP-PRSAHQAVSTPA 479
G +DL+ +N + + W ++K PG P P A S
Sbjct: 253 G----LMSDLWAFNPLDSSWTKIKGSANASAAGVYNLPGNNLPGKPSLPGCRRDAASWSD 308
Query: 480 NKGELWIFGG---EFTSPSETQFYHYKDLWCFSFVERKW 587
G LW+FGG + T+ + F DLW F+ +W
Sbjct: 309 KDGNLWMFGGSGCDNTTGRDPGF--LSDLWLFNTSTNQW 345
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +3
Query: 324 LVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIF 503
L ++GG+ NG K +D++ ++ W + P + + + N G L++F
Sbjct: 191 LYIYGGD--NGAKI--IDDMWKFSFKDMAWSSITFSKLPTFPGSRFSATAWENNGTLYLF 246
Query: 504 GGEFTSPSETQFYHYKDLWCFSFVERKWEKV 596
GG + + DLW F+ ++ W K+
Sbjct: 247 GG------QGELGLMSDLWAFNPLDSSWTKI 271
>SB_37532| Best HMM Match : Kelch_1 (HMM E-Value=1.8e-09)
Length = 118
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 PSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRS 452
P R+ T+ + + ++ LFGG + + +ND+F +N + W++L G P R
Sbjct: 15 PFPRSLHTICAYH-DKDIYLFGGTNDSAKGRSPFNDVFKFNLSKSKWKKLHCEGPMPDRR 73
Query: 453 -AHQAVSTPANKGELWIFGG 509
H A+ G++ +FGG
Sbjct: 74 LGHCAIII---YGQMIVFGG 90
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 37.1 bits (82), Expect = 0.014
Identities = 31/100 (31%), Positives = 44/100 (44%)
Frame = +3
Query: 390 YNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFS 569
Y+ +NVW + AP A P R +H + + F G+ QF + +
Sbjct: 178 YDLATNVWEAV-APMATP-RISHAVAVLNSKAYAVGGFNGDDEDGDNDQFLSSVER--YD 233
Query: 570 FVERKWEKVVAPNGPSPRSGHRMALLSRKLYVFXGYCDDG 689
WE VAP + RS HR+A+L +LY G DDG
Sbjct: 234 PAVGAWE-AVAPMA-TERSNHRVAVLDDRLYAVGGRNDDG 271
>SB_30626| Best HMM Match : Kelch_1 (HMM E-Value=1e-17)
Length = 341
Score = 37.1 bits (82), Expect = 0.014
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Frame = +3
Query: 270 PPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPG-APPP 446
PPS + T + +V+ GG NG+K ++F Y+TV +WRQ+ G P
Sbjct: 83 PPSLSHHTATTIR--DRYIVIIGG--WNGRKRTA--EVFCYDTVEQIWRQISVSGDVPVG 136
Query: 447 RSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSPRS 626
S+H A + I G E + +F + F K+ + AP + RS
Sbjct: 137 LSSHTACLVSTK--SILIIGREGGVHMQRRF---SGAFMLDFETGKYRE--APFHAASRS 189
Query: 627 GHRMALL----SRKLYVF 668
GH L+ S+K YVF
Sbjct: 190 GHTANLVYIRGSKKHYVF 207
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +3
Query: 324 LVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIF 503
L+++GGE G + NDL+I ++++ W K P P+ + N+ L +F
Sbjct: 268 LLIYGGETWTGVRENVTNDLYILDSLAMHW--FKVPSGQAPKLVGHTMCAVNNR--LLVF 323
Query: 504 GGEFTSPSETQFYHYK 551
G+ + + + K
Sbjct: 324 AGKLENRCDNTIWEVK 339
>SB_52865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 34.7 bits (76), Expect = 0.073
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 318 NELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKA--PGAPPPRSAHQAVSTPANKGE 491
+ L++FGG+ G N+L+ +N S +W QL P PPP H A + +K
Sbjct: 202 DSLLVFGGDTGTGLS----NELWQFNLTSRLWAQLAVSDPNTPPPVVDHTA-NIVGDK-- 254
Query: 492 LWIFGGEFTSPS 527
L+++GG + S
Sbjct: 255 LYVYGGRTANTS 266
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 483 KGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVA--PNGPSPRSGHRMALLSRK 656
K L +FGG+ + + LW F+ R W ++ PN P P H ++ K
Sbjct: 201 KDSLLVFGGDTGTGLSNE------LWQFNLTSRLWAQLAVSDPNTPPPVVDHTANIVGDK 254
Query: 657 LYVFXG 674
LYV+ G
Sbjct: 255 LYVYGG 260
>SB_55378| Best HMM Match : Connexin50 (HMM E-Value=1.8)
Length = 455
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 342 EYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAV 467
E HNG ++ L T + W L P PPPR+ H +V
Sbjct: 115 EVHNGAHYKSLAPLHQTPTEYSFWEPLVGPPVPPPRAGHLSV 156
>SB_5543| Best HMM Match : Kelch_1 (HMM E-Value=1.4e-06)
Length = 260
Score = 32.3 bits (70), Expect = 0.39
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 612 PSPRSGHRMALLSRKLYVFXGYCDDG 689
P+ R GH ++ +K+Y+F GY ++G
Sbjct: 91 PAARDGHTACVIGKKIYIFGGYEEEG 116
>SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 345 YHNGQKTETYNDLFIYNTVSNVWRQLKAP-GAPPPRSAHQAVSTPANKGELW 497
+H G+KT D N SN QL G P Q P N LW
Sbjct: 675 FHQGEKTRNTRDFIQVNITSNDTVQLSYDIGNGPQSIVVQVTENPLNTNRLW 726
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 186 EEDIAKVIAEIEREEAKRYAASEK 257
EE+I + +IE+EEAKR AA E+
Sbjct: 1142 EEEITNAMGKIEKEEAKRKAAVEE 1165
>SB_19780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = -2
Query: 679 QYPXKTYNFRLRSA----ILCPERGEG-PLGATTFSHFLSTNEKHH 557
+Y K NF R++ + PERG G GA+T+S+ L+TN HH
Sbjct: 65 KYSLKGVNFWFRTSTELYLQIPERGTGTKYGASTYSN-LTTNTWHH 109
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 552 DLWCFSFVERKWEKVVAPNGPSPR--SGHRMALLSRKLYVFXGY 677
+LW F W++V G +P SGH ++ K+ V GY
Sbjct: 487 ELWIFDTHLMSWQEVSPKGGNTPLAVSGHSATVVGGKMVVLFGY 530
>SB_13788| Best HMM Match : rve (HMM E-Value=0.00016)
Length = 508
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 204 VIAEIEREEAKRYAASEKVLEKPPSSRAYATLTPHPINNELVLFG 338
VI +IE+ A + S V+EKP + + L P P+N E+ L G
Sbjct: 330 VINKIEQPTA--WVNSLVVVEKPKTQKLRVCLDPRPLNKEISLEG 372
>SB_50134| Best HMM Match : Sorting_nexin (HMM E-Value=6.3)
Length = 310
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 366 ETYNDLFIYNTVSNVWRQLKAPGAPP--PRSAHQA--VSTPANKGEL 494
ET ++ + N ++ + LKAP PP P+ AH+ V P NK EL
Sbjct: 151 ETEDNSGLLNIEDDLDKLLKAPSKPPKPPKPAHRQKPVPAPRNKPEL 197
>SB_53882| Best HMM Match : Kelch_1 (HMM E-Value=0.052)
Length = 94
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 573 VERKWEKVVAPNGPSPRSGHRMALLSRKLYVFXG 674
V+ +W++ SPR GH A + KLYVF G
Sbjct: 19 VKVEWKRSGKDCVYSPRDGHCAASVGSKLYVFGG 52
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 387 IYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGE 512
+YN + N W + P PR H AV+T + L++ GG+
Sbjct: 428 VYNPIRNTWSFVPVPRI--PRRNHAAVATETH---LYVIGGD 464
>SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +3
Query: 381 LFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLW 560
L Y+ +S VW + PR+ H A +G L+I GG E +F H W
Sbjct: 301 LLAYDLISGVWYHFPSSNLSVPRTRHCAT---VCEGYLYILGGTPCQIME-KFDHRLKSW 356
Query: 561 CFSF 572
F
Sbjct: 357 SHDF 360
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 403 LTVLYINKSLYVSVFCPLWYSPPNSTSSLLIGCGVS 296
LT L ++ LY S +W SPP +T+ +LIG +S
Sbjct: 1813 LTYLINSRPLYPSSD-DIWESPPITTTDILIGSHIS 1847
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,512,548
Number of Sequences: 59808
Number of extensions: 440506
Number of successful extensions: 1424
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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