Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o04
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 52 3e-07
Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical p... 48 6e-06
Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 35 0.049
U70852-15|AAK29824.1| 543|Caenorhabditis elegans Hypothetical p... 31 0.60
Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical pr... 29 2.4
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 29 2.4
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 29 2.4
Z69663-4|CAA93508.1| 287|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF100306-8|ABB88213.1| 860|Caenorhabditis elegans Hypothetical ... 28 7.4
AF100306-7|ABB88214.1| 895|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +3
Query: 336 GGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIFGGE 512
GGE+ +G N++ +YN S +W +++ G P PR H V K +L++FGG
Sbjct: 307 GGEFFDGSSDP--NNIDVYNVTSRIWSKVEVSGDMPKPRFDHTVVK---YKNKLYMFGGV 361
Query: 513 FTSP--SETQFYHYKDLWCFSFVERKWEKVVAPN-----GPSPRSGHRMALLSRKLYVFX 671
+ +T +LW F +KW + + N P +GH ++ +++V
Sbjct: 362 TKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAPFAVAGHSAHVIRSEMFVIF 421
Query: 672 GY 677
GY
Sbjct: 422 GY 423
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +3
Query: 336 GGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIFGGE 512
GGE+ +G N++ +YN S +W +++ G P PR H V K +L++FGG
Sbjct: 307 GGEFFDGSSDP--NNIDVYNVTSRIWSKVEVSGDMPKPRFDHTVVK---YKNKLYMFGGV 361
Query: 513 FTSP--SETQFYHYKDLWCFSFVERKWEKVVAPN-----GPSPRSGHRMALLSRKLYVFX 671
+ +T +LW F +KW + + N P +GH ++ +++V
Sbjct: 362 TKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAPFAVAGHSAHVIRSEMFVIF 421
Query: 672 GY 677
GY
Sbjct: 422 GY 423
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +3
Query: 336 GGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIFGGE 512
GGE+ +G N++ +YN S +W +++ G P PR H V K +L++FGG
Sbjct: 307 GGEFFDGSSDP--NNIDVYNVTSRIWSKVEVSGDMPKPRFDHTVVK---YKNKLYMFGGV 361
Query: 513 FTSP--SETQFYHYKDLWCFSFVERKWEKVVAPN-----GPSPRSGHRMALLSRKLYVFX 671
+ +T +LW F +KW + + N P +GH ++ +++V
Sbjct: 362 TKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAPFAVAGHSAHVIRSEMFVIF 421
Query: 672 GY 677
GY
Sbjct: 422 GY 423
>Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 315 NNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPP-RSAHQAVSTPANKGE 491
NN++ +FGG + Q+ + ++++ ++ WR++ PP R H A G
Sbjct: 153 NNQMFVFGGYEEDAQRFS--QETYVFDFATSTWREMHTKNDPPRWRDFHTA---SVIDGM 207
Query: 492 LWIFGGEFTSPSETQFYH--YKD-LWCFSFVERKWEKVVAPNG---PSPRSGHRMALLSR 653
++IFGG + H Y D L + W + P P R H +
Sbjct: 208 MYIFGGRSDESGQFHTIHDQYDDTLMALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDG 267
Query: 654 KLYVFXGY 677
K+Y+F GY
Sbjct: 268 KMYMFGGY 275
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Frame = +3
Query: 270 PPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYND-----LFIYNTVSNVWRQLKAPG 434
PP R + T + I+ + +FGG + T +D L N + W + K P
Sbjct: 192 PPRWRDFHTASV--IDGMMYIFGGRSDESGQFHTIHDQYDDTLMALNLATGAWTRTKVPE 249
Query: 435 APPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKV-VAPNG 611
++ ST G++++FGG T HY +L+CF W + V
Sbjct: 250 NTMKPGGRRSHSTWVYDGKMYMFGGYL----GTINVHYNELYCFDPKTSMWSVISVRGTY 305
Query: 612 PSPRSGHRMALLSRKLYVFXG 674
PS R H + + K+Y+F G
Sbjct: 306 PSARRRHCSVVSNGKVYLFGG 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 336 GGEYHNGQKTETY---NDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIF 503
G Y G + + Y N L Y+ NVW++++ G PP R H AV ++++F
Sbjct: 103 GKAYVWGGRNDDYGACNLLHEYDPEYNVWKKVEIEGFVPPSRDGHTAV---VWNNQMFVF 159
Query: 504 GGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSP-RSGHRMALLSRKLYVFXGYC 680
GG + Q + ++ + F F W ++ N P R H +++ +Y+F G
Sbjct: 160 GG---YEEDAQRFS-QETYVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRS 215
Query: 681 DD 686
D+
Sbjct: 216 DE 217
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 585 WEKV-VAPNGPSPRSGHRMALLSRKLYVFXGYCDDGR 692
W+KV + P R GH + + +++VF GY +D +
Sbjct: 131 WKKVEIEGFVPPSRDGHTAVVWNNQMFVFGGYEEDAQ 167
>Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 315 NNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPP-RSAHQAVSTPANKGE 491
NN++ +FGG + Q+ + ++++ ++ WR++ PP R H A G
Sbjct: 153 NNQMFVFGGYEEDAQRFS--QETYVFDFATSTWREMHTKNDPPRWRDFHTA---SVIDGM 207
Query: 492 LWIFGGEFTSPSETQFYH--YKD-LWCFSFVERKWEKVVAPNG---PSPRSGHRMALLSR 653
++IFGG + H Y D L + W + P P R H +
Sbjct: 208 MYIFGGRSDESGQFHTIHDQYDDTLMALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDG 267
Query: 654 KLYVFXGY 677
K+Y+F GY
Sbjct: 268 KMYMFGGY 275
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Frame = +3
Query: 270 PPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYND-----LFIYNTVSNVWRQLKAPG 434
PP R + T + I+ + +FGG + T +D L N + W + K P
Sbjct: 192 PPRWRDFHTASV--IDGMMYIFGGRSDESGQFHTIHDQYDDTLMALNLATGAWTRTKVPE 249
Query: 435 APPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKV-VAPNG 611
++ ST G++++FGG T HY +L+CF W + V
Sbjct: 250 NTMKPGGRRSHSTWVYDGKMYMFGGYL----GTINVHYNELYCFDPKTSMWSVISVRGTY 305
Query: 612 PSPRSGHRMALLSRKLYVFXG 674
PS R H + + K+Y+F G
Sbjct: 306 PSARRRHCSVVSNGKVYLFGG 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 336 GGEYHNGQKTETY---NDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIF 503
G Y G + + Y N L Y+ NVW++++ G PP R H AV ++++F
Sbjct: 103 GKAYVWGGRNDDYGACNLLHEYDPEYNVWKKVEIEGFVPPSRDGHTAV---VWNNQMFVF 159
Query: 504 GGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSP-RSGHRMALLSRKLYVFXGYC 680
GG + Q + ++ + F F W ++ N P R H +++ +Y+F G
Sbjct: 160 GG---YEEDAQRFS-QETYVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRS 215
Query: 681 DD 686
D+
Sbjct: 216 DE 217
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 585 WEKV-VAPNGPSPRSGHRMALLSRKLYVFXGYCDDGR 692
W+KV + P R GH + + +++VF GY +D +
Sbjct: 131 WKKVEIEGFVPPSRDGHTAVVWNNQMFVFGGYEEDAQ 167
>Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 336 GGEYHNGQKTETY---NDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIF 503
G Y G + + Y N L Y+ NVW++++ G PP R H AV ++++F
Sbjct: 103 GKAYVWGGRNDDYGACNLLHEYDPEYNVWKKVEIEGFVPPSRDGHTAV---VWNNQMFVF 159
Query: 504 GGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSP-RSGHRMALLSRKLYVFXGYC 680
GG + Q + ++ + F F W ++ N P R H +++ +Y+F G
Sbjct: 160 GG---YEEDAQRFS-QETYVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRS 215
Query: 681 DD 686
D+
Sbjct: 216 DE 217
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +3
Query: 366 ETYND-LFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFY 542
+ Y+D L N + W + K P ++ ST G++++FGG T
Sbjct: 232 DQYDDTLMALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYL----GTINV 287
Query: 543 HYKDLWCFSFVERKWEKV-VAPNGPSPRSGHRMALLSRKLYVFXG 674
HY +L+CF W + V PS R H + + K+Y+F G
Sbjct: 288 HYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLFGG 332
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 13/134 (9%)
Frame = +3
Query: 315 NNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPP-RSAHQAVSTPANKGE 491
NN++ +FGG + Q+ + ++++ ++ WR++ PP R H A G
Sbjct: 153 NNQMFVFGGYEEDAQRFS--QETYVFDFATSTWREMHTKNDPPRWRDFHTA---SVIDGM 207
Query: 492 LWIFGG---EFTSPSETQFYH-----YKD-LWCFSFVERKWEKVVAPNG---PSPRSGHR 635
++IFGG E + +H Y D L + W + P P R H
Sbjct: 208 MYIFGGRSDESGQVGDEHLFHTIHDQYDDTLMALNLATGAWTRTKVPENTMKPGGRRSHS 267
Query: 636 MALLSRKLYVFXGY 677
+ K+Y+F GY
Sbjct: 268 TWVYDGKMYMFGGY 281
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 585 WEKV-VAPNGPSPRSGHRMALLSRKLYVFXGYCDDGR 692
W+KV + P R GH + + +++VF GY +D +
Sbjct: 131 WKKVEIEGFVPPSRDGHTAVVWNNQMFVFGGYEEDAQ 167
>Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 336 GGEYHNGQKTETY---NDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKGELWIF 503
G Y G + + Y N L Y+ NVW++++ G PP R H AV ++++F
Sbjct: 103 GKAYVWGGRNDDYGACNLLHEYDPEYNVWKKVEIEGFVPPSRDGHTAV---VWNNQMFVF 159
Query: 504 GGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSP-RSGHRMALLSRKLYVFXGYC 680
GG + Q + ++ + F F W ++ N P R H +++ +Y+F G
Sbjct: 160 GG---YEEDAQRFS-QETYVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRS 215
Query: 681 DD 686
D+
Sbjct: 216 DE 217
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +3
Query: 366 ETYND-LFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFY 542
+ Y+D L N + W + K P ++ ST G++++FGG T
Sbjct: 232 DQYDDTLMALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYL----GTINV 287
Query: 543 HYKDLWCFSFVERKWEKV-VAPNGPSPRSGHRMALLSRKLYVFXG 674
HY +L+CF W + V PS R H + + K+Y+F G
Sbjct: 288 HYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLFGG 332
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 13/134 (9%)
Frame = +3
Query: 315 NNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPP-RSAHQAVSTPANKGE 491
NN++ +FGG + Q+ + ++++ ++ WR++ PP R H A G
Sbjct: 153 NNQMFVFGGYEEDAQRFS--QETYVFDFATSTWREMHTKNDPPRWRDFHTA---SVIDGM 207
Query: 492 LWIFGG---EFTSPSETQFYH-----YKD-LWCFSFVERKWEKVVAPNG---PSPRSGHR 635
++IFGG E + +H Y D L + W + P P R H
Sbjct: 208 MYIFGGRSDESGQVGDEHLFHTIHDQYDDTLMALNLATGAWTRTKVPENTMKPGGRRSHS 267
Query: 636 MALLSRKLYVFXGY 677
+ K+Y+F GY
Sbjct: 268 TWVYDGKMYMFGGY 281
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 585 WEKV-VAPNGPSPRSGHRMALLSRKLYVFXGYCDDGR 692
W+KV + P R GH + + +++VF GY +D +
Sbjct: 131 WKKVEIEGFVPPSRDGHTAVVWNNQMFVFGGYEEDAQ 167
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 35.1 bits (77), Expect = 0.049
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +3
Query: 273 PSSRAYATLTPHPINNELVLFGGEYHNGQKTETYN---DLFIYNTVSNVWRQLKAPGAPP 443
PS+ YA+L +L+LFGG N ++ N +L ++T ++ WR + A G P
Sbjct: 193 PSAMCYASLVTW--GTQLILFGGN-DNRRRCPFANVPPELHYFDTSTSTWRYVPATGNSP 249
Query: 444 PRSAHQAVSTPANKGELWIFGG 509
H AV + ++++GG
Sbjct: 250 SSIGHSAV---VSGDYMFVYGG 268
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 492 LWIFGGEFTSPSE-TQFYHYKDLWCFSFVERKWEKVVAPNGPSPRSGHRMALLS--RKLY 662
L++FGGE E T + DLW KW +V+ + P P + +L++ +L
Sbjct: 150 LYLFGGEAIDGDEHTPGAVFNDLWRLDTATLKWSRVIISSAPYPSAMCYASLVTWGTQLI 209
Query: 663 VFXGYCDDGRDC 698
+F G D+ R C
Sbjct: 210 LFGGN-DNRRRC 220
>U70852-15|AAK29824.1| 543|Caenorhabditis elegans Hypothetical
protein F45E4.11 protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 323 LIIDWMWGERCVRSGGWWLFEDLL*CSISFSFLPFYLSYHFSYIFLTKI 177
+I+ MW +R +G W +F LL C I LP S F + L +I
Sbjct: 128 MIVTGMWADRL--NGKWMVFIGLLLCCIGNLMLPLLASKSFWFAVLARI 174
>Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical
protein F20D1.3 protein.
Length = 463
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +3
Query: 312 INNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGE 491
+ N +++ GGE G E D ++ NT + W Q+ + P P + T + G
Sbjct: 261 VTNAILMAGGEVDRGSGFERLLDYWVLNTQTFQWLQIPSQ-MPCPLIEPRL--TACHSGN 317
Query: 492 LWIFGGEFTSP 524
++++ G+F P
Sbjct: 318 IYVW-GDFDQP 327
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 29.5 bits (63), Expect = 2.4
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Frame = +3
Query: 318 NELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLK----APGAPP-PRSAHQAVSTPAN 482
+ +V++GG NG + DL+ N + W ++K G PP PRS H +V
Sbjct: 226 SRMVVYGGM--NGVRL---GDLWYLNLNTLHWTEIKFDDPRTGIPPMPRSLHSSVLIG-- 278
Query: 483 KGELWIFGG-----EFTSPSETQFYHYK---DLWCFSFVERKWEKVVA-----PNGPSPR 623
+++++GG E S + +K L C++ E +W + P R
Sbjct: 279 -DKMFVYGGWVPLLEHASTEQQTEKEWKCTSSLGCWNITEDRWVPLHLYCSDEDTIPRGR 337
Query: 624 SGHRMALLSRKLYVFXG 674
+GH A + ++Y++ G
Sbjct: 338 AGHCAAAVGDRMYIWSG 354
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 582 KWEKVVAPNGPSP--RSGHRMALLSRKLYVFXG 674
+W V GP+P R GHR +L + +F G
Sbjct: 29 RWRIVQQSTGPNPKPRHGHRAVVLKELIVIFGG 61
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 29.5 bits (63), Expect = 2.4
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Frame = +3
Query: 318 NELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLK----APGAPP-PRSAHQAVSTPAN 482
+ +V++GG NG + DL+ N + W ++K G PP PRS H +V
Sbjct: 226 SRMVVYGGM--NGVRL---GDLWYLNLNTLHWTEIKFDDPRTGIPPMPRSLHSSVLIG-- 278
Query: 483 KGELWIFGG-----EFTSPSETQFYHYK---DLWCFSFVERKWEKVVA-----PNGPSPR 623
+++++GG E S + +K L C++ E +W + P R
Sbjct: 279 -DKMFVYGGWVPLLEHASTEQQTEKEWKCTSSLGCWNITEDRWVPLHLYCSDEDTIPRGR 337
Query: 624 SGHRMALLSRKLYVFXG 674
+GH A + ++Y++ G
Sbjct: 338 AGHCAAAVGDRMYIWSG 354
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 582 KWEKVVAPNGPSP--RSGHRMALLSRKLYVFXG 674
+W V GP+P R GHR +L + +F G
Sbjct: 29 RWRIVQQSTGPNPKPRHGHRAVVLKELIVIFGG 61
>Z69663-4|CAA93508.1| 287|Caenorhabditis elegans Hypothetical
protein K02B9.3a protein.
Length = 287
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 433 VPRLRVVPIKLSPPLLTKVSFGYLEENSRVH 525
VP R++P K S + K+ +GY +E ++VH
Sbjct: 247 VPASRIIPFKESRSEMWKLLWGYGQETAKVH 277
>AF100306-8|ABB88213.1| 860|Caenorhabditis elegans Hypothetical
protein T24C4.6a protein.
Length = 860
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 277 PPERTQRSPHIQSIMSLCCLVENTTTDKRQKHTTIYL 387
PP T R+P+++ + C + TT D+ +++T + L
Sbjct: 235 PPLITARAPNVKRLFLPRCPAKRTTIDEEEQNTHVIL 271
>AF100306-7|ABB88214.1| 895|Caenorhabditis elegans Hypothetical
protein T24C4.6b protein.
Length = 895
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 277 PPERTQRSPHIQSIMSLCCLVENTTTDKRQKHTTIYL 387
PP T R+P+++ + C + TT D+ +++T + L
Sbjct: 235 PPLITARAPNVKRLFLPRCPAKRTTIDEEEQNTHVIL 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,378,393
Number of Sequences: 27780
Number of extensions: 330698
Number of successful extensions: 1181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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