Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10o02
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical pr... 124 5e-29
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 38 0.007
U80839-12|AAB37918.1| 252|Caenorhabditis elegans Hypothetical p... 32 0.36
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 32 0.36
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 31 1.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 31 1.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 31 1.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 31 1.1
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF025458-3|AAB70976.1| 612|Caenorhabditis elegans Hypothetical ... 30 1.9
U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein. 29 4.4
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 29 4.4
AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical... 29 4.4
Z99281-53|CAB16519.2| 677|Caenorhabditis elegans Hypothetical p... 28 5.8
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 28 5.8
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 5.8
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 28 5.8
>Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical
protein T26E3.4 protein.
Length = 240
Score = 124 bits (300), Expect = 5e-29
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 7/206 (3%)
Frame = +2
Query: 113 MDYNYEQTSEVEALDSIYFGDMAVIETK--PFHKFSIPIKSEGFDD--GEGLACHLVFTY 280
M + +Q E+EAL++IY + + ++ P + SI +KS ++D + L +
Sbjct: 1 MSHQEQQEQEIEALEAIYSEEEIHVASRDYPNIELSIQLKSNQYEDPTDDDFDVELGIEF 60
Query: 281 TSKYPDELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETW 460
T YPDE+PII ++ E+ E + L +ENLGMVMVF +VSA Q+ + E
Sbjct: 61 TENYPDEIPIITLNGIEDAFTAERIAESIDKLRSVAEENLGMVMVFAIVSALQDEIGELV 120
Query: 461 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGI---PAKREREA 631
D K+ +EE++ +++ E K+FEGT VT ++F AW+ +F+ + A++ER A
Sbjct: 121 DVKKRAKEEKVEIEKEKKEAESRKKFEGTVVTPDTFRAWKDRFDEERKAEIDAAEKERLA 180
Query: 632 KDKNKLTGRELFLQDTTLNESDLKFL 709
+LTGR+LFL+D TLN SD+ +
Sbjct: 181 SLAGRLTGRQLFLRDATLNLSDVTLI 206
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/85 (27%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Frame = +2
Query: 467 VKKEREERILAKQKADEE-AELKRFEGTRVTVESFLAWRK------QFEIDMGIPAKRER 625
+++++E+ I ++ ++E A L T++T+++F+AW+K + + + + K+E+
Sbjct: 211 MEQQKEDEISIEELVEKERAALSSKNLTKLTLQTFIAWKKKKLRERKEKEEADLKEKKEK 270
Query: 626 EAKDK-NKLTGRELFLQDTTLNESD 697
K N ++GR+LFL D L +D
Sbjct: 271 IKSGKHNGMSGRDLFLYDANLVNND 295
>U80839-12|AAB37918.1| 252|Caenorhabditis elegans Hypothetical
protein ZC204.12 protein.
Length = 252
Score = 32.3 bits (70), Expect = 0.36
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Frame = +2
Query: 389 KENLGMVMVFTLVSAGQEWLNETWDK----VKKEREERILAK-QKADEEAELKRFEGTRV 553
K+ + + FTL+ AGQE LN+T K KK E + A + + E ++ R
Sbjct: 62 KKKISIKAEFTLLCAGQEPLNKTEKKDSDCTKKSTEYEVCAMFTECETENHFEKGSDLRF 121
Query: 554 TVESFLAWR---KQFEIDMGIPAKREREAKDKNKLTGRELFLQDTTLNESDLK 703
VE + K+ + AK+E K+ +K+ G E + D ++ LK
Sbjct: 122 EVELTIVMENSSKKSSVKPKPEAKQE-PTKENDKIVGSESMMLDQLTSKLFLK 173
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 446 LNETWDKVKKEREERILAKQKADEE---AELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 616
L+ +DK++ + E L K + D E A+ K+F+ +E +L K+ E D P
Sbjct: 1276 LHYYYDKLQTDYYEPYLKKDEKDPELLAAKKKKFKEDGNNLEEYLG-EKRKEFDEKNPGY 1334
Query: 617 REREAKDK 640
RE++ KDK
Sbjct: 1335 REKQQKDK 1342
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 437 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 616
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 617 REREAKDKNKLTGRE 661
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 437 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 616
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 617 REREAKDKNKLTGRE 661
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 437 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 616
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 617 REREAKDKNKLTGRE 661
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 437 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 616
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 617 REREAKDKNKLTGRE 661
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 473 KEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKNK 646
K+++E++ KQ+ +EEA +K E + + A +KQ E + + A+ E + ++ K
Sbjct: 519 KKKQEKLELKQREEEEARIKEEEEKQRKILEEEARKKQEEEEARLKAEEELKIYEEEK 576
>AF025458-3|AAB70976.1| 612|Caenorhabditis elegans Hypothetical
protein C01B12.3 protein.
Length = 612
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +2
Query: 425 VSAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMG 604
V++ Q W NE+ +K+E E + K D E+ + S L D+G
Sbjct: 544 VASSQSWFNESLPVIKEEEEAK--RKSNTDTESPKSSKHSSMSIRRSELRRSSSSGSDLG 601
Query: 605 IPAKREREAKD 637
KRER+ +
Sbjct: 602 KSGKRERKKSE 612
>U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical
protein ZC196.5 protein.
Length = 564
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 419 TLVSAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTR--VTVESFLAWRKQFE 592
+L QE+ N T K++++REER ++ ADEEA+ RFE + V S + R +FE
Sbjct: 341 SLNQQNQEFEN-TMKKLREKREER---RRLADEEAKQSRFEFQQRIVAFHSCVLLRIRFE 396
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +2
Query: 440 EWLN-----ETWDKVKKEREERI-LAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 598
+WLN E ++ ++ER+ER L K+K +E K+ R+ E + KQF+ID
Sbjct: 4 DWLNAIPDSEDSEEDEEERQERARLLKEKEEEREACKKRYLERIEREEAQRFGKQFKID 62
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 464 KVKKEREERILAK----QKADEEAELKRFEGTRVTVESFLAWRKQ 586
K +KE +ER LA+ QKA EE E + + VT E A+ K+
Sbjct: 71 KKRKEEQERKLAERRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKE 115
>AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein.
Length = 133
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 479 REERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 598
+EE +++ K EE +LK E +E+F WRK+ ++
Sbjct: 69 KEEEFMSQMKEREEVKLKDLE---TKLENFEKWRKEIRLE 105
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 464 KVKKEREERILAK----QKADEEAELKRFEGTRVTVESFLAWRKQ 586
K +KE +ER LA+ QKA EE E + + VT E A+ K+
Sbjct: 71 KKRKEEQERKLAERRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKE 115
>AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical
protein C29F9.2 protein.
Length = 133
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 479 REERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 598
+EE +++ K EE +LK E +E+F WRK+ ++
Sbjct: 69 KEEEFMSQMKEREEVKLKDLE---TKLENFEKWRKEIRLE 105
>Z99281-53|CAB16519.2| 677|Caenorhabditis elegans Hypothetical
protein Y57G11C.18 protein.
Length = 677
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 275 TYTSKYPDELPIIEIDNEENFDNIVDKEELLTHL 376
+Y KY + P+ + +NE+ FD++ + + HL
Sbjct: 434 SYQEKYYESPPVYKAENEQLFDDVTYHNDGINHL 467
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/76 (22%), Positives = 43/76 (56%)
Frame = +2
Query: 467 VKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKNK 646
++K+ E+ K+K +EEA+ ++ + + +FLAW+++ E + A++ ++ + + +
Sbjct: 364 IRKKLEQEEDKKRKKEEEAKNEKIKEAQA---AFLAWKRKKEELLNEEAEKLKKEQVQKQ 420
Query: 647 LTGRELFLQDTTLNES 694
L E + + NE+
Sbjct: 421 LEESEKMTRLSLANEA 436
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +2
Query: 464 KVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKN 643
K KKE ER+ ++ ++ + K+ E R+ + F K+ + ++ERE +++
Sbjct: 960 KAKKEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFEERMKKEQEKQEEKERKEREKREEK 1019
Query: 644 KLTGREL 664
+ RE+
Sbjct: 1020 ERKEREI 1026
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +2
Query: 164 YFGDMAVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYPDELPIIEIDNEENFDN 343
Y D+A + F S ++ + FDD E L L ++S+ PD + +
Sbjct: 269 YSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQ 328
Query: 344 IVDKEELLTHLAEQGKENLG 403
+VD E+ + +E G+ G
Sbjct: 329 VVDTNEVASEESELGEACFG 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,596,198
Number of Sequences: 27780
Number of extensions: 325154
Number of successful extensions: 1101
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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