Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o02
         (717 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.94 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.8  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   6.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   6.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 269 VFTYTSKYPD--ELPIIEIDNEENFDNIVDKE 358
           VFT   K  +  EL +  I NE+  DN++DK+
Sbjct: 16  VFTKQKKVKEDTELNLQTIFNEDKLDNLMDKQ 47


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 425 VSAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFE 541
           VSAG    + TW +V +  +   LA +K D+ +    F+
Sbjct: 426 VSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFK 464


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 425 VSAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFE 541
           VSAG    + TW +V +  +   LA +K D+ +    F+
Sbjct: 426 VSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFK 464


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 122  NYEQTSEVEALDSIYFGDMAV 184
            NY++ S VEA+ ++  G+M+V
Sbjct: 1042 NYDRDSLVEAVRAVQRGEMSV 1062


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 472 ERA*RKDTSQTKGR*RGRTEK 534
           ER  RK    +KGR R RTE+
Sbjct: 275 EREYRKYRETSKGRSRDRTER 295


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 472 ERA*RKDTSQTKGR*RGRTEK 534
           ER  RK    +KGR R RTE+
Sbjct: 286 EREYRKYRETSKGRSRDRTER 306


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +2

Query: 428 SAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDM 601
           SAG    N+TW  V +  +   LA QK +  +    F+      +  +      E+D+
Sbjct: 433 SAGFSQTNKTWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDV 490


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,192
Number of Sequences: 438
Number of extensions: 4011
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)