Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o01
         (137 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             22   3.0  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           21   4.0  

>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 20 HEDYIRIAVSDAGAEHLLQHLHDE 91
          H  ++R+  + A   HLL HLH E
Sbjct: 11 HLRHLRVLAA-AADHHLLVHLHPE 33


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 39  LLCLTLVQSISCSIFMTKXHSQDD 110
           +LC  L+ +++ ++ +T  H+Q D
Sbjct: 59  VLCCVLLLTLTLTVAVTAQHNQAD 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,717
Number of Sequences: 2352
Number of extensions: 1184
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 25
effective length of database: 505,179
effective search space used: 10103580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)