Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o01
         (137 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124397-1|BAC85846.1|  155|Homo sapiens protein ( Homo sapiens ...    28   4.6  

>AK124397-1|BAC85846.1|  155|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42406 fis, clone ASTRO3000482. ).
          Length = 155

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 6   STVGXMKTIYALLCLTLVQSISCSI-FMTK 92
           ST+  ++++ ALL L L  SI+C I FMTK
Sbjct: 116 STIARLRSVMALLQLHLAFSITCVIKFMTK 145


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,740,438
Number of Sequences: 237096
Number of extensions: 141655
Number of successful extensions: 206
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 76,859,062
effective HSP length: 26
effective length of database: 70,694,566
effective search space used: 1343196754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)