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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n22
         (641 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40169| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.60 
SB_56824| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6)                   28   7.4  
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)        27   9.8  
SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09)                  27   9.8  
SB_47329| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)                       27   9.8  

>SB_40169| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/28 (42%), Positives = 22/28 (78%)
 Frame = +2

Query: 440 SDKNDVCLIQVPYQLKVQVSTSDNASVH 523
           S+KNDV ++ +P++ KV  +T +NA+V+
Sbjct: 123 SNKNDVTILAIPHKQKVPSTTMENATVN 150


>SB_56824| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 116 KYIKMFSLTGRRHLHKVLKTLRLSFADFSNLPDIKKLNAVRTVEKTI 256
           K + +   T R HL +  KT+ L FA+FS   D +  +     E  I
Sbjct: 17  KIMALVHRTERAHLKRKSKTIALIFAEFSEFSDAEISDGANCAEPII 63


>SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6)
          Length = 361

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 336 CAFKSFTSMGWILTCMGLSTKILVLLSIVFSTVLT 232
           C    +  +G+I+T  GL T +L  LSI  +  +T
Sbjct: 167 CLNYDYDKLGYIITAYGLPTHLLTQLSIATAIAIT 201


>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
          Length = 561

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 419 LLNKNTASDKNDVCLIQVPYQLKVQVSTSDNASVH 523
           LLN +T+ D NDV  I++   + + VST     +H
Sbjct: 368 LLNASTSPDDNDVIDIEMQCDMLIIVSTLCEGDIH 402


>SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09)
          Length = 195

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 167 LKTLRLSFADFSNLPDIKKLN-AVRTVEKTIDNNTSIFV 280
           +K LRL+  DF N P +  L+  V+ +E+      S++V
Sbjct: 95  VKQLRLATVDFGNAPSLDNLSEGVKFIEEIRSKGDSVYV 133


>SB_47329| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 432

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +2

Query: 95  ENFIVYVKYIKMFSLTGRRHLHKVLKTLRLSFADFSNLPDIKKLNAVRTVEKTIDNNTSI 274
           E  ++    I+  S TG   L   L TL+L+      LP+I KLN  +  E+  ++   +
Sbjct: 257 EELVMSESPIENISPTGE--LFPNLHTLKLNKTAIGRLPNITKLNGTKVDEEEREDAERL 314

Query: 275 FV 280
           F+
Sbjct: 315 FI 316


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 204  LLKSAKDNLKVLRTLCKCLRPVRENILMY 118
            ++K A   L  LRTL KC  PV++ + +Y
Sbjct: 2740 IIKKANRRLYALRTLKKCGVPVKDMVTVY 2768


>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
          Length = 1376

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 209 PDIKKLNAVRTVEKTIDNNTSIFVESPIHVKIQPIDV 319
           P I  +  +R +  +IDNN+    +    V+I+P+D+
Sbjct: 572 PSIGTIPEIRVISASIDNNSEGVTDMDDTVEIEPLDL 608


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,365,638
Number of Sequences: 59808
Number of extensions: 299908
Number of successful extensions: 721
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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