BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10n22 (641 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_40169| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60 SB_56824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6 SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6) 28 7.4 SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 27 9.8 SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09) 27 9.8 SB_47329| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 27 9.8 >SB_40169| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 728 Score = 31.5 bits (68), Expect = 0.60 Identities = 12/28 (42%), Positives = 22/28 (78%) Frame = +2 Query: 440 SDKNDVCLIQVPYQLKVQVSTSDNASVH 523 S+KNDV ++ +P++ KV +T +NA+V+ Sbjct: 123 SNKNDVTILAIPHKQKVPSTTMENATVN 150 >SB_56824| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 94 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +2 Query: 116 KYIKMFSLTGRRHLHKVLKTLRLSFADFSNLPDIKKLNAVRTVEKTI 256 K + + T R HL + KT+ L FA+FS D + + E I Sbjct: 17 KIMALVHRTERAHLKRKSKTIALIFAEFSEFSDAEISDGANCAEPII 63 >SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6) Length = 361 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 336 CAFKSFTSMGWILTCMGLSTKILVLLSIVFSTVLT 232 C + +G+I+T GL T +L LSI + +T Sbjct: 167 CLNYDYDKLGYIITAYGLPTHLLTQLSIATAIAIT 201 >SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) Length = 561 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 419 LLNKNTASDKNDVCLIQVPYQLKVQVSTSDNASVH 523 LLN +T+ D NDV I++ + + VST +H Sbjct: 368 LLNASTSPDDNDVIDIEMQCDMLIIVSTLCEGDIH 402 >SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09) Length = 195 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 167 LKTLRLSFADFSNLPDIKKLN-AVRTVEKTIDNNTSIFV 280 +K LRL+ DF N P + L+ V+ +E+ S++V Sbjct: 95 VKQLRLATVDFGNAPSLDNLSEGVKFIEEIRSKGDSVYV 133 >SB_47329| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 432 Score = 27.5 bits (58), Expect = 9.8 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = +2 Query: 95 ENFIVYVKYIKMFSLTGRRHLHKVLKTLRLSFADFSNLPDIKKLNAVRTVEKTIDNNTSI 274 E ++ I+ S TG L L TL+L+ LP+I KLN + E+ ++ + Sbjct: 257 EELVMSESPIENISPTGE--LFPNLHTLKLNKTAIGRLPNITKLNGTKVDEEEREDAERL 314 Query: 275 FV 280 F+ Sbjct: 315 FI 316 >SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2870 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 204 LLKSAKDNLKVLRTLCKCLRPVRENILMY 118 ++K A L LRTL KC PV++ + +Y Sbjct: 2740 IIKKANRRLYALRTLKKCGVPVKDMVTVY 2768 >SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) Length = 1376 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +2 Query: 209 PDIKKLNAVRTVEKTIDNNTSIFVESPIHVKIQPIDV 319 P I + +R + +IDNN+ + V+I+P+D+ Sbjct: 572 PSIGTIPEIRVISASIDNNSEGVTDMDDTVEIEPLDL 608 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,365,638 Number of Sequences: 59808 Number of extensions: 299908 Number of successful extensions: 721 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 715 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1620947750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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