Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n22
         (641 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g18490.1 68417.m02742 hypothetical protein                          31   0.49 
At3g43100.1 68416.m04530 hypothetical protein includes At2g05890...    29   3.5  
At5g35250.1 68418.m04179 hypothetical protein includes At2g05890...    28   4.6  
At4g28130.1 68417.m04033 diacylglycerol kinase accessory domain-...    28   4.6  
At4g07450.1 68417.m01143 hypothetical protein includes At2g05890...    28   6.1  
At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR...    28   6.1  
At1g26798.1 68414.m03264 Expressed protein                             28   6.1  
At2g27080.2 68415.m03254 harpin-induced protein-related / HIN1-r...    27   8.0  
At2g27080.1 68415.m03253 harpin-induced protein-related / HIN1-r...    27   8.0  

>At4g18490.1 68417.m02742 hypothetical protein 
          Length = 594

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
 Frame = +2

Query: 185 SFADFSNLPDI--KKLNAVRT--VEKTIDNNTSIFVESPIHVKIQPI----------DVN 322
           S A   NL  +  K L  +R+   +K     + +   SPI  +IQP+            N
Sbjct: 294 SMAGLDNLRAMQNKDLGLIRSRFFKKPEKPESHVLESSPIETEIQPVIRENIGSSLNPTN 353

Query: 323 DLNAHNKLTMTLYSHGKDASDFQVKQTSKRLELLNKNTASDKNDVCLIQVPYQLKVQVST 502
           D ++H K+    +S+GK   +  V      L+L  KNT  +K+   ++Q+    K+  S+
Sbjct: 354 DTSSHEKIIHKDHSNGKTVEN--VAGQMDHLKLQAKNTTREKS---ILQINISSKLDASS 408

Query: 503 -SDNASVHLS 529
            +   S HLS
Sbjct: 409 LTQKLSNHLS 418


>At3g43100.1 68416.m04530 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 269

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +2

Query: 314 DVNDLNAHNKLTMTLYSHGKDASDFQVKQT--SKRLELLNK--NTASDKNDVCLIQ 469
           ++ DLNA+NK T  +  H KD  D ++  T   K  E++++    ++D   VCLI+
Sbjct: 150 EIQDLNANNKPTKKIDFHLKDQHDTRLACTLWGKYAEIVDQACQESTDGIVVCLIR 205


>At5g35250.1 68418.m04179 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 384

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +2

Query: 314 DVNDLNAHNKLTMTLYSHGKDASDFQVKQT--SKRLELLNK--NTASDKNDVCLIQ 469
           ++ DLNA+NK T  +  H +D  D ++  T   K  E+++K    ++D   VCLI+
Sbjct: 84  EIQDLNANNKPTEKIDFHLRDQHDNRLACTLWGKYAEIVDKACQESTDGIVVCLIR 139


>At4g28130.1 68417.m04033 diacylglycerol kinase accessory
           domain-containing protein similar to diacylglycerol
           kinase [Lycopersicon esculentum] GI:10798892; contains
           Pfam profile PF00609: Diacylglycerol kinase accessory
           domain (presumed)
          Length = 466

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 23/88 (26%), Positives = 37/88 (42%)
 Frame = +2

Query: 281 ESPIHVKIQPIDVNDLNAHNKLTMTLYSHGKDASDFQVKQTSKRLELLNKNTASDKNDVC 460
           E+PI V I       L A   LT     + K   D +V+   K L+ +  N    K+D  
Sbjct: 45  ENPILVFINSKSGGQLGAELILTYRTLLNDKQVFDLEVETPDKVLQRIYLNLERLKDDSL 104

Query: 461 LIQVPYQLKVQVSTSDNASVHLSKLXGD 544
             ++  +LK+ V+  D  +  L  +  D
Sbjct: 105 ASKIRDKLKIIVAGGDGTAGWLLGVVSD 132


>At4g07450.1 68417.m01143 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 439

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +2

Query: 317 VNDLNAHNKLTMTLYSHGKDASDFQVKQT--SKRLELLNK--NTASDKNDVCLIQ 469
           + DLNA+NK T  +  H +D  D ++  T   K  E++++    ++D   VCLI+
Sbjct: 72  IQDLNANNKPTKKIDFHLRDQHDTRLACTLWGKYAEIVDQACQESADGTVVCLIR 126


>At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1131

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +2

Query: 104  IVYVKYIKMFSLTGRRHLHKVLKTLRLSFADFSNLPD-IKKLNAVRTVEKTIDNNTSIFV 280
            +VY+       L G   L   L+ L LS+ D  ++PD IK L+ +   E  +   T +  
Sbjct: 747  LVYLDMSHNEKLQGLTQLPTSLRHLNLSYTDIESIPDCIKALHQLE--ELCLSGCTRLAS 804

Query: 281  ESPIHVKIQPIDVNDLNAHNKLTMTLYS 364
               +   I+ ++  D  +   ++  LY+
Sbjct: 805  LPDLPCSIKALEAEDCESLESVSSPLYT 832


>At1g26798.1 68414.m03264 Expressed protein
          Length = 151

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 257 DNNTSIFVESPIHVKIQPIDVNDLNAHNKLTMTLYSHGKD 376
           +N TS+ V+ P   K   I +N LN H +L +   + GKD
Sbjct: 27  ENYTSVDVDLPFAPK-HVIIINTLNPHERLVVHCRNKGKD 65


>At2g27080.2 68415.m03254 harpin-induced protein-related /
           HIN1-related / harpin-responsive protein-related
           contains 1 transmembrane domain; similar to hin1 homolog
           (GI:13122296) [Arabidopsis thaliana]; similar to hin1
           (GI:22830759) [Nicotiana tabacum]
          Length = 260

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 299 KIQPIDV--NDLNAHNKLTMTLYSHGKDASDFQVKQTSKRLELLNKNTASDKNDVCLIQV 472
           K   +DV  ND++  N +    Y   K+ +  ++  +  +++L +      +N+V    V
Sbjct: 148 KESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTV 207

Query: 473 PYQLKVQ 493
           P++LK++
Sbjct: 208 PFKLKIK 214


>At2g27080.1 68415.m03253 harpin-induced protein-related /
           HIN1-related / harpin-responsive protein-related
           contains 1 transmembrane domain; similar to hin1 homolog
           (GI:13122296) [Arabidopsis thaliana]; similar to hin1
           (GI:22830759) [Nicotiana tabacum]
          Length = 260

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 299 KIQPIDV--NDLNAHNKLTMTLYSHGKDASDFQVKQTSKRLELLNKNTASDKNDVCLIQV 472
           K   +DV  ND++  N +    Y   K+ +  ++  +  +++L +      +N+V    V
Sbjct: 148 KESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTV 207

Query: 473 PYQLKVQ 493
           P++LK++
Sbjct: 208 PFKLKIK 214


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,433,837
Number of Sequences: 28952
Number of extensions: 211592
Number of successful extensions: 545
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)