Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n19
         (167 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   1.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   1.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   4.0  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    21   4.0  

>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
          isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 54 FLQTYFDIFQSWFAKY 7
          FL+ +FDIFQ +F  +
Sbjct: 12 FLEFFFDIFQLYFHSF 27


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 33   CQNKFVENFVNQ 68
            CQ+KFVE F  Q
Sbjct: 1297 CQDKFVERFTKQ 1308


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 114 IYYYRXHFVTFAFSY 158
           I+ +  HFV F+FS+
Sbjct: 56  IFMFLLHFVLFSFSF 70


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
          homeotic protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 86 EANNIILINKIFYKLILTSFSHGSRNTS 3
          +ANN ++ +  F   I + + + S+NT+
Sbjct: 2  DANNFVMSSYQFVNSIASCYPNNSQNTN 29


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,551
Number of Sequences: 2352
Number of extensions: 1115
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 34
effective length of database: 484,011
effective search space used: 10164231
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)