Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n19
         (167 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118698-1|AAM50558.1|  570|Drosophila melanogaster AT19257p pro...    27   3.5  
AE014296-2960|AAN11700.1|  573|Drosophila melanogaster CG32181-P...    27   3.5  
AY089224-1|AAL89962.1| 1117|Drosophila melanogaster AT01932p pro...    27   4.6  
AE014298-1084|AAF46292.2| 1117|Drosophila melanogaster CG1514-PA...    27   4.6  

>AY118698-1|AAM50558.1|  570|Drosophila melanogaster AT19257p
           protein.
          Length = 570

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 21  MTERCQNKFVENFVNQNYIICFGITSAS 104
           + ER QN++ E FVN  Y  C G+  AS
Sbjct: 398 LVERIQNEYHETFVNDPY--CPGVIQAS 423


>AE014296-2960|AAN11700.1|  573|Drosophila melanogaster CG32181-PA
           protein.
          Length = 573

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 21  MTERCQNKFVENFVNQNYIICFGITSAS 104
           + ER QN++ E FVN  Y  C G+  AS
Sbjct: 401 LVERIQNEYHETFVNDPY--CPGVIQAS 426


>AY089224-1|AAL89962.1| 1117|Drosophila melanogaster AT01932p
           protein.
          Length = 1117

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 75  IICFGITSASFAXIYYYRXHFVTFAF 152
           II  GIT    A I+YY   F+ FAF
Sbjct: 50  IIVSGITLTLLAVIWYYPTFFLFFAF 75


>AE014298-1084|AAF46292.2| 1117|Drosophila melanogaster CG1514-PA
           protein.
          Length = 1117

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 75  IICFGITSASFAXIYYYRXHFVTFAF 152
           II  GIT    A I+YY   F+ FAF
Sbjct: 50  IIVSGITLTLLAVIWYYPTFFLFFAF 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,556,182
Number of Sequences: 53049
Number of extensions: 49371
Number of successful extensions: 124
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 24,988,368
effective HSP length: 36
effective length of database: 23,078,604
effective search space used: 438493476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)