Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10n19
(167 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02330.1 68418.m00156 DC1 domain-containing protein contains ... 30 0.18
At2g02610.1 68415.m00200 DC1 domain-containing protein contain... 29 0.41
At2g40050.1 68415.m04921 DC1 domain-containing protein contains ... 28 0.73
At2g13900.1 68415.m01542 DC1 domain-containing protein contains ... 27 1.3
At2g02640.1 68415.m00203 DC1 domain-containing protein contain... 27 1.7
At5g02340.1 68418.m00157 DC1 domain-containing protein contains ... 27 2.2
At2g13950.1 68415.m01550 DC1 domain-containing protein contains ... 27 2.2
At2g02630.1 68415.m00202 DC1 domain-containing protein contains ... 27 2.2
At5g09580.1 68418.m01109 expressed protein ; expression support... 26 3.9
At5g02350.1 68418.m00158 DC1 domain-containing protein contains ... 26 3.9
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin... 25 5.1
At3g22940.1 68416.m02890 F-box family protein-related contains T... 25 8.9
>At5g02330.1 68418.m00156 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 656
Score = 30.3 bits (65), Expect = 0.18
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 33 CQNKFVE--NFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
C+ K+ N + NYIICF + + Y HF+TF
Sbjct: 511 CRKKYGRKLNCIECNYIICFSCATLPYKAKYKLDKHFLTF 550
>At2g02610.1 68415.m00200 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 29.1 bits (62), Expect = 0.41
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 36 QNKFVENFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
+NK V N + ++IICF + + Y + H++TF
Sbjct: 485 KNKKVLNCIECDFIICFECATLPYMVRYKHDEHYLTF 521
>At2g40050.1 68415.m04921 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 609
Score = 28.3 bits (60), Expect = 0.73
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 54 NFVNQNYIICFGITSASFAXIYYYRXHFVTFAF 152
N + N+I+CF + + Y + HF+T +F
Sbjct: 479 NCIKCNFIVCFKCVTLPYKIKYKHDTHFLTISF 511
>At2g13900.1 68415.m01542 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 661
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 54 NFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
N + +Y+ICF + + Y + HF+TF
Sbjct: 523 NCIECDYVICFKCATLPYEAKYKHDKHFLTF 553
>At2g02640.1 68415.m00203 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 36 QNKFVENFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
++K V N + ++IICF + + Y + H++TF
Sbjct: 485 KDKKVLNCIECDFIICFECATLPYMVRYKHDEHYLTF 521
>At5g02340.1 68418.m00157 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 631
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 54 NFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
N + YIICF + + Y + HF+TF
Sbjct: 495 NCMECKYIICFRCATLPYKAKYKHDKHFLTF 525
>At2g13950.1 68415.m01550 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 54 NFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
N + YIICF + + Y + HF+TF
Sbjct: 417 NCMECKYIICFRCATLPYKAKYKHDKHFLTF 447
>At2g02630.1 68415.m00202 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 440
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 36 QNKFVENFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
++K V N + ++I+CF + + Y + H++TF
Sbjct: 292 KDKKVLNCIECDFIVCFECATLPYMIRYKHDEHYLTF 328
>At5g09580.1 68418.m01109 expressed protein ; expression supported
by MPSS
Length = 393
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 48 VENFVNQNYIICFGITSASFAXIYYYR 128
V N V NY G SA FA +Y+YR
Sbjct: 72 VPNLVLYNYPSFSGAFSALFAHLYHYR 98
>At5g02350.1 68418.m00158 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 54 NFVNQNYIICFGITSASFAXIYYYRXHFVTF 146
N + +Y++CF + + Y + HF+TF
Sbjct: 515 NCIECDYVLCFICATLPYEAKYKHDKHFLTF 545
>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
protein-related contains Pfam profiles PF03107: DC1
domain, weak hit to PF00628: PHD-finger
Length = 513
Score = 25.4 bits (53), Expect = 5.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 60 VNQNYIICFGITSASFAXIYYYRXHFVTF 146
V N++ICF + + Y + H++TF
Sbjct: 381 VECNFVICFTCATLPYMVRYKHDEHYLTF 409
>At3g22940.1 68416.m02890 F-box family protein-related contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 412
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 57 FVNQNYIICFGITSASFAXI 116
F+N ++IICF TS F +
Sbjct: 219 FLNADHIICFDFTSERFGPL 238
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,218,644
Number of Sequences: 28952
Number of extensions: 22408
Number of successful extensions: 63
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 12,070,560
effective HSP length: 36
effective length of database: 11,028,288
effective search space used: 209537472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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