Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10n18
(529 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 157 2e-37
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 124 1e-27
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 124 1e-27
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 122 4e-27
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 108 9e-23
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 100 2e-20
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 98 1e-19
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 94 2e-18
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 93 3e-18
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 91 2e-17
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 90 3e-17
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 85 1e-15
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 80 3e-14
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 71 1e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 71 1e-11
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 60 4e-08
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 50 3e-05
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 46 4e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 40 0.027
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.082
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 36 0.76
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 1.0
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 5.4
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 7.1
UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1... 32 7.1
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_Q0VR85 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 32 9.4
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 157 bits (380), Expect = 2e-37
Identities = 77/130 (59%), Positives = 94/130 (72%)
Frame = +3
Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 494
S+SR+ R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+IL
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 495 TFDQLALRAP 524
TFDQLAL +P
Sbjct: 122 TFDQLALDSP 131
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 124 bits (300), Expect = 1e-27
Identities = 62/122 (50%), Positives = 83/122 (68%)
Frame = +3
Query: 159 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 338
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 339 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 518
M+ +EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 519 AP 524
P
Sbjct: 126 LP 127
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 124 bits (299), Expect = 1e-27
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = +3
Query: 246 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 425
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 426 TVAALHVTEKARARILAAGGEILTFDQLALRAP 524
+ AL VT +ARARI+ AGGEI+TFDQLAL++P
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSP 101
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 122 bits (295), Expect = 4e-27
Identities = 64/131 (48%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Frame = +3
Query: 135 GIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 311
GID K H R RT KS ++ T+A FN++VL+ LF+S+INRPP
Sbjct: 2 GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPP 61
Query: 312 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 491
+SVSR+AR +K+ VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE
Sbjct: 62 VSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGEC 121
Query: 492 LTFDQLALRAP 524
+T DQLA+RAP
Sbjct: 122 ITLDQLAVRAP 132
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 108 bits (259), Expect = 9e-23
Identities = 54/94 (57%), Positives = 72/94 (76%)
Frame = +3
Query: 246 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 425
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 426 TVAALHVTEKARARILAAGGEILTFDQLALRAPT 527
+V AL VTE AR RILA+GGE+LTFDQL R+PT
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPT 131
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 100 bits (239), Expect = 2e-20
Identities = 64/142 (45%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Frame = +3
Query: 108 NYVFL*IFQGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRR 281
N L I QG+D K R V R +V S ++ T+++FN VLRR
Sbjct: 208 NQTSLSIQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSQFNATVLRR 266
Query: 282 LFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKAR 461
L +R R PISVSRL + + + VVVGTVT+D RL +PK+ V AL TE AR
Sbjct: 267 LQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKLNVCALRFTETAR 326
Query: 462 ARILAAGGEILTFDQLALRAPT 527
RILAAGG+ LTFDQLA + PT
Sbjct: 327 KRILAAGGKTLTFDQLAQQNPT 348
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 97.9 bits (233), Expect = 1e-19
Identities = 49/94 (52%), Positives = 65/94 (69%)
Frame = +3
Query: 246 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 425
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 426 TVAALHVTEKARARILAAGGEILTFDQLALRAPT 527
V AL TE AR RI+ AGGE LTFDQLALR PT
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPT 187
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 93.9 bits (223), Expect = 2e-18
Identities = 57/132 (43%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +3
Query: 135 GIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 311
GID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 2 GIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPV 61
Query: 312 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 491
+SVSRLA M K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG
Sbjct: 62 LSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRC 119
Query: 492 LTFDQLALRAPT 527
++FD+L PT
Sbjct: 120 MSFDELLAEKPT 131
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 93.5 bits (222), Expect = 3e-18
Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
Frame = +3
Query: 246 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 407
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 408 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPT 527
+IP M V AL ++ AR I+AAGGE LTFDQLA+ APT
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPT 139
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 90.6 bits (215), Expect = 2e-17
Identities = 55/130 (42%), Positives = 71/130 (54%)
Frame = +3
Query: 138 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 317
ID++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 3 IDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVS 62
Query: 318 VSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 497
S+LA MKK E AV V TVT D R Y +PKM V AL T+ A A I AGG+ L
Sbjct: 63 TSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLR 119
Query: 498 FDQLALRAPT 527
FD+LAL+APT
Sbjct: 120 FDELALKAPT 129
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 89.8 bits (213), Expect = 3e-17
Identities = 60/135 (44%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Frame = +3
Query: 129 FQGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRIN 302
+QG+D K R V R +V S ++ T++ FN VLRRL +R
Sbjct: 295 WQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSNFNATVLRRLQQTRTA 353
Query: 303 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 482
R PISVSRL + + + VVVGTVT+DVRL +PK+ V TE AR RILAAG
Sbjct: 354 RYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKIKV----FTETARKRILAAG 409
Query: 483 GEILTFDQLALRAPT 527
G+ LTFDQLA + PT
Sbjct: 410 GKTLTFDQLAQQNPT 424
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 84.6 bits (200), Expect = 1e-15
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = +3
Query: 300 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 479
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 480 GGEILTFDQLALRAP 524
GG+ LTFDQLAL +P
Sbjct: 153 GGKNLTFDQLALDSP 167
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +3
Query: 306 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 485
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 486 EILTFDQLALRAP 524
+IL+FDQLA+ +P
Sbjct: 107 KILSFDQLAMTSP 119
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 73.7 bits (173), Expect = 2e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +3
Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+
Sbjct: 111 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPL 170
Query: 315 SVSRL 329
++SR+
Sbjct: 171 ALSRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 71.3 bits (167), Expect = 1e-11
Identities = 39/112 (34%), Positives = 64/112 (57%)
Frame = +3
Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P+
Sbjct: 4 GLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPL 62
Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 470
+SRL R M ++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 63 LLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 71.3 bits (167), Expect = 1e-11
Identities = 39/112 (34%), Positives = 64/112 (57%)
Frame = +3
Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P+
Sbjct: 4 GLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPL 62
Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 470
+SRL R M ++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 63 LLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +3
Query: 393 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 524
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSP 168
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 246 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 425
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 426 TVAALHVT 449
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 50.0 bits (114), Expect = 3e-05
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +3
Query: 255 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 434
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 435 ALHVTEKARARILAAGGEILTFDQL 509
AL+ + + +I+ GG+I +++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEI 149
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 46.4 bits (105), Expect = 4e-04
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = -3
Query: 521 STKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLL 342
S+ SQLI+S F++S Q+ +SS+ L S VI + + +++LL
Sbjct: 77 SSNSQLIQSDGFTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLL 136
Query: 341 HVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 240
+R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 137 QGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 40.3 bits (90), Expect = 0.027
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +3
Query: 339 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 518
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 519 AP 524
P
Sbjct: 112 YP 113
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.082
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -1
Query: 487 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 308
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 307 GRLI 296
G LI
Sbjct: 63 GSLI 66
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 35.5 bits (78), Expect = 0.76
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 261 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 437
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 438 LHVTEKARARILAAGGEILTFDQLALRAP 524
+E A+ + AGG +T +L P
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENP 111
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 1.0
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 327 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 440
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 5.4
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 255 KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTRE------GLIAVVVGTVTNDVRLY 410
+F +++ L++S RP I SV LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA--GLGIV 1301
Query: 411 KIPKMTVAALH 443
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 509 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 405
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: EGF-like domain
containing protein - Tetrahymena thermophila SB210
Length = 2328
Score = 32.3 bits (70), Expect = 7.1
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 254 QIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSHK*RETVQDTEDDGG 433
Q+Q D S + + Y P+TN C+S AP++ + C+ S T +D +
Sbjct: 702 QLQPDNSCACVNQVYDPSTNKCISC-APNQVYDPINKICQNCNPS---CSTCKDASNLNT 757
Query: 434 CSSCYRKSSCTHFGCWRR--NSYF*SAGSSC 520
C+SC + C SYF A C
Sbjct: 758 CTSCPTGKVLYNGNCQDSCPQSYFADANKVC 788
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 7.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 332 RQTRHRDWWPVDTAHKEP 279
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
>UniRef50_Q0VR85 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 197
Score = 31.9 bits (69), Expect = 9.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 410 VQSHVICDCPHYHGNQTLTSWLLHVARQTRH 318
+ + + DCP++H Q L WL H+ + R+
Sbjct: 139 INASKVQDCPYFHYQQQLAQWLHHLDEEARY 169
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 31.9 bits (69), Expect = 9.4
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 249 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 425
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 426 TVAALHVTEKARARILAAGGEILTFDQLALRAP 524
VAA + AR +I AAGGE LT +L P
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENP 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,900,571
Number of Sequences: 1657284
Number of extensions: 10416418
Number of successful extensions: 26373
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 25591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26351
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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