Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n18
         (529 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18 pro...   157   3e-38
BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18 p...   157   3e-38
BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18 p...   157   3e-38
AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18 p...   157   3e-38
BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18 p...   155   1e-37
DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18 p...   130   4e-30
Z49155-1|CAA89025.1|  180|Homo sapiens cL83D3.1 (exons 3-7) prot...    30   4.4  
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot...    30   4.4  
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.           30   4.4  

>L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  157 bits (380), Expect = 3e-38
 Identities = 77/130 (59%), Positives = 94/130 (72%)
 Frame = +3

Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
           G+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2   GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61

Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 494
           S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+IL
Sbjct: 62  SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121

Query: 495 TFDQLALRAP 524
           TFDQLAL +P
Sbjct: 122 TFDQLALDSP 131


>BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  157 bits (380), Expect = 3e-38
 Identities = 77/130 (59%), Positives = 94/130 (72%)
 Frame = +3

Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
           G+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2   GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61

Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 494
           S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+IL
Sbjct: 62  SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121

Query: 495 TFDQLALRAP 524
           TFDQLAL +P
Sbjct: 122 TFDQLALDSP 131


>BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  157 bits (380), Expect = 3e-38
 Identities = 77/130 (59%), Positives = 94/130 (72%)
 Frame = +3

Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
           G+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2   GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61

Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 494
           S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+IL
Sbjct: 62  SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121

Query: 495 TFDQLALRAP 524
           TFDQLAL +P
Sbjct: 122 TFDQLALDSP 131


>AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  157 bits (380), Expect = 3e-38
 Identities = 77/130 (59%), Positives = 94/130 (72%)
 Frame = +3

Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
           G+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2   GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61

Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 494
           S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+IL
Sbjct: 62  SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121

Query: 495 TFDQLALRAP 524
           TFDQLAL +P
Sbjct: 122 TFDQLALDSP 131


>BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  155 bits (375), Expect = 1e-37
 Identities = 76/130 (58%), Positives = 93/130 (71%)
 Frame = +3

Query: 135 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 314
           G+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2   GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61

Query: 315 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 494
            +SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+IL
Sbjct: 62  CLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121

Query: 495 TFDQLALRAP 524
           TFDQLAL +P
Sbjct: 122 TFDQLALDSP 131


>DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18
           protein.
          Length = 164

 Score =  130 bits (313), Expect = 4e-30
 Identities = 61/93 (65%), Positives = 77/93 (82%)
 Frame = +3

Query: 246 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 425
           TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+
Sbjct: 16  TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75

Query: 426 TVAALHVTEKARARILAAGGEILTFDQLALRAP 524
            V AL VT +AR+RIL AGG+ILTFDQLAL +P
Sbjct: 76  KVCALRVTSRARSRILRAGGKILTFDQLALDSP 108


>Z49155-1|CAA89025.1|  180|Homo sapiens cL83D3.1 (exons 3-7)
           protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 458 SFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHV 336
           +F  N+KSS   +R       +  C H    Q   SWLL+V
Sbjct: 138 AFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNV 178


>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
           protein.
          Length = 3144

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 458 SFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHV 336
           +F  N+KSS   +R       +  C H    Q   SWLL+V
Sbjct: 256 AFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNV 296


>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
          Length = 3144

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 458 SFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHV 336
           +F  N+KSS   +R       +  C H    Q   SWLL+V
Sbjct: 256 AFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNV 296


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,707,990
Number of Sequences: 237096
Number of extensions: 1659232
Number of successful extensions: 6780
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6780
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)