Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n17
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    26   0.19 
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   4.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.3  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 159 KLLIIFKETISHFLFGFLLYLMNNSTIS*FCVFH 58
           +++II  E  S FL+GF++YL+ ++  S +   H
Sbjct: 128 EIVIIDIEIYSQFLYGFMIYLILDTIKSKYRQMH 161


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +1

Query: 73  LGYSRVIH*V**KSKQKMTYRFFKYYQEFLRRRPYLV 183
           +GY +  H +   +K  + + ++ Y   + R  PY++
Sbjct: 43  IGYVKHFHPLALSNKNAIDFNYYYYAATYARFGPYVI 79


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 124 FSVWISIIPNE*LYYI 77
           F +WI ++P E +Y++
Sbjct: 309 FILWIILVPEEQVYHL 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,999
Number of Sequences: 336
Number of extensions: 2935
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)