Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10n16
(486 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 190 3e-49
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 30 0.77
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 0.77
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 30 0.77
AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical ... 29 2.4
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81461-8|CAB03839.1| 442|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 190 bits (464), Expect = 3e-49
Identities = 92/127 (72%), Positives = 104/127 (81%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 275
VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL ++E
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76
Query: 276 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 455
FRKF+LIAE VQG+NVL NFH M +T DKL +VKKW TLIEAN VKTTDGY LRVF
Sbjct: 77 ADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVF 136
Query: 456 CIGFTNK 476
I FT K
Sbjct: 137 VIAFTKK 143
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
C25G4.5 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -3
Query: 400 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 224
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 223 PFNPSEAI 200
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 30.3 bits (65), Expect = 0.77
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 412 LASMRVCHFLTIHLSLSVVRSMPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 239
+AS++ LT+ L L +P LQ L+P T S + + ++ S S S+ S+
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190
Query: 238 TSKTLPFNPSEA 203
+S PF PSE+
Sbjct: 191 SSAFHPFRPSES 202
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -3
Query: 400 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 224
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 223 PFNPSEAI 200
N SE++
Sbjct: 1182 VLNSSESL 1189
>AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical
protein C18E3.3 protein.
Length = 893
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 177 VNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIA-EYVQGRNVLCNFHGMD 353
+ RT+ +KI S GL ++ E S ++ +A R +R F A EY+ G N++ G
Sbjct: 144 LKRTKESKIGS-GLPRKLEEDS--NISEFHNAHRFYRSFLEAAVEYLYGYNIMWEIDGGG 200
Query: 354 LTTDKLRW 377
D++ W
Sbjct: 201 RLEDEINW 208
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 216 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 326
L+G + +S+ D +A TD E S + R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237
>Z81461-8|CAB03839.1| 442|Caenorhabditis elegans Hypothetical
protein C04F12.10 protein.
Length = 442
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 439 YPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQST 326
YP + + + + V FL+I+ + + +PW L ST
Sbjct: 85 YPFLWYATASYPLHVAVFLSINSIIETIIDLPWDLYST 122
>Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical
protein F57B1.7 protein.
Length = 235
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 331 STLRPCTYSAINLNLRKDLSASVSACRSARETSKTLPFNPSEAIFVP 191
+ L Y +IN + + LS+ S+ A S ++PF PS +F+P
Sbjct: 37 NALNSLLYGSINTSPQPLLSSPTSS--DASSCSPSMPFTPSIPMFMP 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,294,588
Number of Sequences: 27780
Number of extensions: 232235
Number of successful extensions: 620
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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