Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n15
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.0  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.5  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.5  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   6.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 267 YVVFPSNF*QGFSYCPLQA 211
           +++FP++F   FS  PL++
Sbjct: 305 FIIFPTHFYCAFSLYPLKS 323


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 506 PGSVGTTTFAPCPLPF 459
           PG   T  +A CP P+
Sbjct: 183 PGKKNTIVYACCPEPY 198


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 506 PGSVGTTTFAPCPLPF 459
           PG   T  +A CP P+
Sbjct: 183 PGKKNTIVYACCPEPY 198


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 506 PGSVGTTTFAPCPLPF 459
           PG   T  +A CP P+
Sbjct: 183 PGKKNTIVYACCPEPY 198


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 506 PGSVGTTTFAPCPLPF 459
           PG   T  +A CP P+
Sbjct: 183 PGKKNTIVYACCPEPY 198


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 506 PGSVGTTTFAPCPLPF 459
           PG   T  +A CP P+
Sbjct: 183 PGKKNTIVYACCPEPY 198


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 7  LLGAGLYVNTCTILRNKRCFH 69
          ++G GL  + C I   KR +H
Sbjct: 11 VVGGGLVGSLCAIFMAKRGYH 31


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 7  LLGAGLYVNTCTILRNKRCFH 69
          ++G GL  + C I   KR +H
Sbjct: 11 VVGGGLVGSLCAIFMAKRGYH 31


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 7  LLGAGLYVNTCTILRNKRCFH 69
          ++G GL  + C I   KR +H
Sbjct: 11 VVGGGLVGSLCAIFMAKRGYH 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,949
Number of Sequences: 336
Number of extensions: 2614
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)