Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10n15
(518 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.5
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 2.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 2.5
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 4.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.6
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 2.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 314 ILPTACSNPVSASKRFETQTIYKNSYLPATATIPTPVKPSPNIIASTAQMEGDTVQKLSY 493
+L C N V KR +Y+ P T +P + I+AS + EG +
Sbjct: 347 LLEFVCVNYVGR-KRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKREGGPPTGATT 405
Query: 494 LPNPV 508
PN +
Sbjct: 406 GPNEI 410
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 232 EALSKVGRKYDIHNELLGREKR 297
++L + RK+ +H E L RE+R
Sbjct: 98 KSLEERERKHAVHKEQLSREQR 119
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 395 PATATIPTPVKPSPNII 445
P ++PTPV P+P +
Sbjct: 151 PRGGSLPTPVTPTPTTV 167
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 365 TQTIYKNSYLPATATIPTPVKPSPNIIAST 454
T + N +LP IP P + +IAS+
Sbjct: 572 TYCAFWNEFLPKLKGIPDPXPNTCKVIASS 601
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 166 PGKKNTITYQCCPEPY 181
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 166 PGKKNTITYQCCPEPY 181
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 166 PGKKNTITYQCCPEPY 181
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 166 PGKKNTITYQCCPEPY 181
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 166 PGKKNTITYQCCPEPY 181
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 166 PGKKNTITYQCCPEPY 181
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 234 PGKKNTITYQCCPEPY 249
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 506 PGSVGTTTFAPCPLPF 459
PG T T+ CP P+
Sbjct: 234 PGKKNTITYQCCPEPY 249
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,878
Number of Sequences: 438
Number of extensions: 3485
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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