Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10n09
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44387| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23) 111 6e-25
SB_48945| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23) 111 6e-25
SB_53948| Best HMM Match : Robl_LC7 (HMM E-Value=9.3e-25) 103 9e-23
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 7e-22
SB_47827| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_13938| Best HMM Match : Robl_LC7 (HMM E-Value=2.5e-17) 77 2e-14
SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 30 1.4
SB_57360| Best HMM Match : Peptidase_A17 (HMM E-Value=8.9e-29) 30 1.9
SB_56018| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_33033| Best HMM Match : G-patch (HMM E-Value=0.71) 27 9.9
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 27 9.9
>SB_44387| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)
Length = 160
Score = 111 bits (266), Expect = 6e-25
Identities = 50/94 (53%), Positives = 74/94 (78%)
Frame = +2
Query: 38 MATEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVRE 217
MA+ VE +KRIQ+HKGV+G ++VN EG PI+S LDN+T++LYA L + AR+ VR+
Sbjct: 64 MASSVENILKRIQSHKGVIGSIVVNSEGTPIRSDLDNSTTLLYASNCHHLAKLARSTVRD 123
Query: 218 MDSTNELTFLRVRSRRHEILIAPDREFILIVIQN 319
+D N+L+ LRV+SR++EI+IAP E++LIV+Q+
Sbjct: 124 IDPQNDLSILRVKSRKYEIIIAPYEEYMLIVVQS 157
>SB_48945| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)
Length = 101
Score = 111 bits (266), Expect = 6e-25
Identities = 50/94 (53%), Positives = 74/94 (78%)
Frame = +2
Query: 38 MATEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVRE 217
MA+ VE +KRIQ+HKGV+G ++VN EG PI+S LDN+T++LYA L + AR+ VR+
Sbjct: 5 MASSVENILKRIQSHKGVIGSIVVNSEGTPIRSDLDNSTTLLYASNCHHLAKLARSTVRD 64
Query: 218 MDSTNELTFLRVRSRRHEILIAPDREFILIVIQN 319
+D N+L+ LRV+SR++EI+IAP E++LIV+Q+
Sbjct: 65 IDPQNDLSILRVKSRKYEIIIAPYEEYMLIVVQS 98
>SB_53948| Best HMM Match : Robl_LC7 (HMM E-Value=9.3e-25)
Length = 101
Score = 103 bits (248), Expect = 9e-23
Identities = 46/91 (50%), Positives = 69/91 (75%)
Frame = +2
Query: 47 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDS 226
EVEE +KRI H GV G +I N EG+ I+S++DN+T+ +Y I +T+ AR+ VR++D
Sbjct: 6 EVEEVLKRIINHPGVTGSIITNPEGVAIRSTMDNSTTQIYLSNIQSMTQMARSAVRDLDP 65
Query: 227 TNELTFLRVRSRRHEILIAPDREFILIVIQN 319
N+L FLR+RSR++EIL+AP+ ++ LIVIQ+
Sbjct: 66 LNDLKFLRIRSRKYEILVAPENDYTLIVIQS 96
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 101 bits (241), Expect = 7e-22
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Frame = +2
Query: 35 IMAT-EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVV 211
IM T EVE T++RI H GVMG +++N++G PIKSS+D T+ LYA L A + V
Sbjct: 106 IMTTSEVENTLQRISLHPGVMGWLVINNQGEPIKSSMDIPTTQLYASEFAPLAHFAHSAV 165
Query: 212 REMDSTNELTFLRVRSRRHEILIAPDREFILIVIQ 316
R+MD NEL F+RVR+ + E ++APD E++LIVIQ
Sbjct: 166 RDMDPQNELRFIRVRTNKMEFMVAPDNEYLLIVIQ 200
>SB_47827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/98 (39%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Frame = +2
Query: 38 MATEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVRE 217
MA +VE ++RIQ+HKGV+G ++N EG +++S+D T+ YA + L AR VR+
Sbjct: 1 MALQVERRLERIQSHKGVLGSAVINPEGKVLRTSMDTTTTNQYANMCKNLASMARGTVRD 60
Query: 218 MDSTNELTFLRVRSRRHEILIAPDR----EFILIVIQN 319
+D ++L LRVR++ HE++IAP+R F ++ +Q+
Sbjct: 61 VDPADDLLILRVRTKEHEVIIAPERTGDGTFFIVALQS 98
>SB_13938| Best HMM Match : Robl_LC7 (HMM E-Value=2.5e-17)
Length = 111
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/89 (39%), Positives = 56/89 (62%)
Frame = +2
Query: 56 ETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDSTNE 235
+ I RI+ H V GV+++N +G+ + +SLD + Y L E AR +R+ D ++
Sbjct: 14 DRIHRIEGHTNVSGVLVINTKGLILHTSLDTTQTTAYTQQCVPLVELARATIRDTDPEDD 73
Query: 236 LTFLRVRSRRHEILIAPDREFILIVIQNT 322
L F RVR+ +HE++IAP+ ++ LIVIQ T
Sbjct: 74 LRFFRVRTLKHELIIAPEDKYTLIVIQKT 102
>SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = +2
Query: 50 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 229
VE+ + RIQ KGV G++IVN +G+PI+S+LDN++++ Y + + AR+VVR+ D T
Sbjct: 265 VEQILDRIQQQKGVTGLIIVNQDGMPIRSTLDNSSTLQYVNMCKTMCGIARSVVRDTDPT 324
Query: 230 NELTFLR 250
N+L LR
Sbjct: 325 NDLKILR 331
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +2
Query: 47 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGL--IGQLTEKARNVVREM 220
++EE I ++Q K ++++ +G K ++ + L QL E+ + RE+
Sbjct: 118 KLEEMIAKLQKEKREEQTLVMDGKGF--KQDIERMKNELETERKRTSQLVEERDEMAREL 175
Query: 221 DSTN-ELTFLRVRSRRHEILIAPDREFILIVIQNTSD*IFTYKKQ 352
D+ EL + + + D + + +++T D +FTY+K+
Sbjct: 176 DNAKKELQYHKQTTEECATADDDDYAMLKLKLKSTKDELFTYQKR 220
>SB_57360| Best HMM Match : Peptidase_A17 (HMM E-Value=8.9e-29)
Length = 1354
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 65 KRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREM 220
KR+ + V VVIV+ EGI ++ LD + YA K R V RE+
Sbjct: 37 KRVPVGRVVYPVVIVDVEGIKCRALLDTGSGSSYASAALLDRLKKRQVTREV 88
>SB_56018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 47 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQ 184
E+++ I R++ KG G + H+G S D+ L AGLI +
Sbjct: 36 ELKDFIDRMRKKKGERGGPVTEHDGEYQFSGSDDEDEQLLAGLIAE 81
>SB_33033| Best HMM Match : G-patch (HMM E-Value=0.71)
Length = 696
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 50 VEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDST 229
+ +T A GV IV+ G + + L A LI +L K R V D+T
Sbjct: 512 IVKTSSSATASDGVANA-IVSSSGYVLNTVLGQAVDDRRESLIQRLKMKLRAVRNMSDAT 570
Query: 230 NELTFLRVRS 259
ELT ++R+
Sbjct: 571 KELTEAQIRN 580
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 25 RLIHNG-HRGRRNDQEDPSPQRGDGCRHRKPRRYTNQK 135
RL H RG R+D+ P P+R D R+ RRY +++
Sbjct: 1853 RLRHEADRRGDRHDERRPMPERKD---DRRDRRYDDRR 1887
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,985,343
Number of Sequences: 59808
Number of extensions: 385651
Number of successful extensions: 883
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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