Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n09
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54216-5|CAA90946.1|   95|Caenorhabditis elegans Hypothetical pr...    95   3e-20
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical pr...    29   2.8  
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t...    29   2.8  
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t...    29   2.8  
AF045640-7|AAU05589.1|  978|Caenorhabditis elegans Novel channel...    29   2.8  
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel...    29   2.8  
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel...    29   2.8  
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel...    29   2.8  
AC006627-7|AAK85463.1|  218|Caenorhabditis elegans Hypothetical ...    28   6.5  
AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z54216-5|CAA90946.1|   95|Caenorhabditis elegans Hypothetical
           protein T24H10.6 protein.
          Length = 95

 Score = 95.5 bits (227), Expect = 3e-20
 Identities = 39/94 (41%), Positives = 73/94 (77%)
 Frame = +2

Query: 44  TEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMD 223
           ++ EETI+R+Q+ KGV+G+++V+  G  I S++D+  +  +   + QL EK +  +RE+D
Sbjct: 2   SDFEETIRRLQSEKGVVGIIVVDSAGRVIHSTIDSDATQSHTAFLQQLCEKTKTSIRELD 61

Query: 224 STNELTFLRVRSRRHEILIAPDREFILIVIQNTS 325
           S+N+LTFLR+R++++EI+IAPD++ +++VI++ S
Sbjct: 62  SSNDLTFLRLRTKKNEIMIAPDKDHVIMVIKDLS 95


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 34  HNGHRGRRNDQEDPSPQRGDGCRHRKPRR 120
           HN HR +RN  +DPS    D   H   RR
Sbjct: 249 HNHHRRKRNHDDDPSDTTIDHTGHNHRRR 277



 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 34  HNGHRGRRNDQEDPSPQRGDGCRHRKPRRYTN 129
           HN HR RR+D  DP+    D   H   RR  N
Sbjct: 227 HN-HRRRRSDDHDPNDPNVDHIGHNHHRRKRN 257



 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 34  HNGHRGRRNDQEDPSPQRGDGCRHRKPRRY 123
           HN HR RR+D  DP+    D   H   RR+
Sbjct: 316 HN-HRRRRSDDHDPNDPNVDHTGHNHKRRH 344


>Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical
           protein K01B6.3 protein.
          Length = 410

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 114 WFTMTTPITPLWAWILLIVSSTSVAIMY 31
           W T+  P TP WA ++ I+ ST   I +
Sbjct: 70  WKTLAVPGTPSWALLVCIIESTFALICF 97


>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
           voltage-gatedion channel alpha-1 subunit protein.
          Length = 1797

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 321 HRIKSLLTKNSRLIYN*NYFILFFRTLFIIY 413
           +RI+ LL ++S+ + N   F +FF TL+ I+
Sbjct: 183 NRIEQLLKRSSQQVKNVTLFFVFFMTLYAIF 213


>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
           voltage-gatedion channel alpha-1 subunit protein.
          Length = 1831

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 321 HRIKSLLTKNSRLIYN*NYFILFFRTLFIIY 413
           +RI+ LL ++S+ + N   F +FF TL+ I+
Sbjct: 183 NRIEQLLKRSSQQVKNVTLFFVFFMTLYAIF 213


>AF045640-7|AAU05589.1|  978|Caenorhabditis elegans Novel channel
           type/putative nematodecalcium channel protein 1, isoform
           b protein.
          Length = 978

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 321 HRIKSLLTKNSRLIYN*NYFILFFRTLFIIY 413
           +RI+ LL ++S+ + N   F +FF TL+ I+
Sbjct: 241 NRIEQLLKRSSQQVKNVTLFFVFFMTLYAIF 271


>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
           type/putative nematodecalcium channel protein 1, isoform
           a protein.
          Length = 1562

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 321 HRIKSLLTKNSRLIYN*NYFILFFRTLFIIY 413
           +RI+ LL ++S+ + N   F +FF TL+ I+
Sbjct: 241 NRIEQLLKRSSQQVKNVTLFFVFFMTLYAIF 271


>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
           type/putative nematodecalcium channel protein 1, isoform
           c protein.
          Length = 1913

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 321 HRIKSLLTKNSRLIYN*NYFILFFRTLFIIY 413
           +RI+ LL ++S+ + N   F +FF TL+ I+
Sbjct: 241 NRIEQLLKRSSQQVKNVTLFFVFFMTLYAIF 271


>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
           type/putative nematodecalcium channel protein 1, isoform
           d protein.
          Length = 1861

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 321 HRIKSLLTKNSRLIYN*NYFILFFRTLFIIY 413
           +RI+ LL ++S+ + N   F +FF TL+ I+
Sbjct: 213 NRIEQLLKRSSQQVKNVTLFFVFFMTLYAIF 243


>AC006627-7|AAK85463.1|  218|Caenorhabditis elegans Hypothetical
           protein E01A2.6 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 52  RRNDQEDPSPQRGDGCRHRKPRRY 123
           R ND +D   QRGDGC     + Y
Sbjct: 100 RSNDFDDDGDQRGDGCSSNYSKAY 123


>AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical
           protein C24F3.4 protein.
          Length = 703

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 168 LGLLDSLLRRPGMWFVKWT 224
           +GL D  + R   WFVKWT
Sbjct: 119 MGLADDNVYRESRWFVKWT 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,971
Number of Sequences: 27780
Number of extensions: 311605
Number of successful extensions: 681
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)