Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n06
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    25   1.4  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    25   1.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   1.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   3.3  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 173 WRTATRFQKIRTQI*NSNARVRSGSFDRVAR 81
           WR   R+++I T I    A  RSG+ D+  R
Sbjct: 36  WRVIKRYKEILTTIRKPQANRRSGTVDQNLR 66


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 321 ALEFFLRESHQYYRAVVRMHL 383
           ALE+F+   H+ Y    R HL
Sbjct: 89  ALEYFVENGHEVYAVFPRFHL 109


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/16 (56%), Positives = 15/16 (93%)
 Frame = +3

Query: 246 SNFFTYLRKIFTVNIV 293
           +++FT+LR +F+VNIV
Sbjct: 150 ASYFTFLRWLFSVNIV 165


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 336 LRESHQYYRAVVRMHLVLLFTVAALLGSC 422
           ++E  +Y   V+    + +FT+A +LG+C
Sbjct: 491 VKEDWKYVALVLDRLFLWIFTIACVLGTC 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,476
Number of Sequences: 2352
Number of extensions: 12188
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)