Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10n03
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.18 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.1  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   5.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 172 NFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 288
           N  + RK  ++ GSEY   IVSLGE K ++   CE  +P
Sbjct: 847 NLYDARKPYVN-GSEYHPSIVSLGEYKCVT-CKCENGKP 883


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 99  YLFIEL*KEFHTKDRISR 152
           Y  +EL KEFHT   ++R
Sbjct: 233 YQTLELEKEFHTNHYLTR 250


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 99  YLFIEL*KEFHTKDRISR 152
           Y  +EL KEFHT   ++R
Sbjct: 15  YQTLELEKEFHTNHYLTR 32


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 379 DLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 477
           D+  +L+  L +C+  SKCI + +    +E+KV
Sbjct: 212 DMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKV 244


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 379 DLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 477
           D+  +L+  L +C+  SKCI + +    +E+KV
Sbjct: 212 DMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKV 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,154
Number of Sequences: 336
Number of extensions: 3507
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)