Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10n03
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical p... 157 6e-39
Z92838-10|CAB07412.2| 312|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z92832-9|CAB07377.2| 312|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U00033-16|AAM29690.1| 65|Caenorhabditis elegans Hypothetical p... 40 0.001
U39999-1|AAK93855.1| 277|Caenorhabditis elegans Hypothetical pr... 34 0.10
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical ... 31 0.94
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 31 0.94
AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81147-3|CAB03530.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81520-1|CAB04223.1| 399|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46381-9|CAI58660.1| 807|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46381-8|CAA86517.2| 808|Caenorhabditis elegans Hypothetical pr... 28 5.0
U97001-6|AAB52257.2| 374|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF098503-1|AAC67408.1| 360|Caenorhabditis elegans Hypothetical ... 28 6.7
AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein. 27 8.8
AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching abn... 27 8.8
>U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical
protein F37C12.13a protein.
Length = 434
Score = 157 bits (381), Expect = 6e-39
Identities = 70/184 (38%), Positives = 121/184 (65%)
Frame = +1
Query: 91 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 270
MR ++NCEK I + + G R D R+ E R + + G+E G I ++G TK+++ V+
Sbjct: 1 MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS 60
Query: 271 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 450
E+A+P +RP++G+I I+V+L+PMA E +R + L+RLLE +DS+CID+E+
Sbjct: 61 AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEA 120
Query: 451 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIXTLTEK 630
LCI +++W +R+++++L+ DG+L +CA +A + ++ HFRRP+ T + +I + EK
Sbjct: 121 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK 180
Query: 631 DPIP 642
P+P
Sbjct: 181 APVP 184
>Z92838-10|CAB07412.2| 312|Caenorhabditis elegans Hypothetical
protein F31D4.1 protein.
Length = 312
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Frame = +1
Query: 106 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETK-ILSEVTC 273
LS+ EK F+ R DGR+ + R++ + G G C V LG+T +L+ +
Sbjct: 5 LSDDEKLFLITGAEANIRNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKL 64
Query: 274 EVAQ---PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDL 444
E+ + P + I F NV+ + A+ QF + L + Y SK +D+
Sbjct: 65 ELESYDAETEKEPKQPINF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDI 121
Query: 445 E---SLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPD 582
+ + + W + ++I VL DG++++ SIA + +++ P+
Sbjct: 122 MPNLAKTQLADGYRWKINVDISVLQWDGSVSDAISIAIIGALSDLEFPE 170
>Z92832-9|CAB07377.2| 312|Caenorhabditis elegans Hypothetical
protein F31D4.1 protein.
Length = 312
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Frame = +1
Query: 106 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETK-ILSEVTC 273
LS+ EK F+ R DGR+ + R++ + G G C V LG+T +L+ +
Sbjct: 5 LSDDEKLFLITGAEANIRNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKL 64
Query: 274 EVAQ---PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDL 444
E+ + P + I F NV+ + A+ QF + L + Y SK +D+
Sbjct: 65 ELESYDAETEKEPKQPINF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDI 121
Query: 445 E---SLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPD 582
+ + + W + ++I VL DG++++ SIA + +++ P+
Sbjct: 122 MPNLAKTQLADGYRWKINVDISVLQWDGSVSDAISIAIIGALSDLEFPE 170
>U00033-16|AAM29690.1| 65|Caenorhabditis elegans Hypothetical
protein F37C12.13b protein.
Length = 65
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 91 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETK 252
MR ++NCEK I + + G R D R+ E R + + G+E G I ++G TK
Sbjct: 1 MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTK 54
>U39999-1|AAK93855.1| 277|Caenorhabditis elegans Hypothetical
protein F41G3.14 protein.
Length = 277
Score = 33.9 bits (74), Expect = 0.10
Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Frame = +1
Query: 121 KNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 300
+ + + +G DGR + +KL G E G S+ T+ ++ V+C + +
Sbjct: 12 RGYFATFIKEGVYPDGRGLLDEQKLVFKQG-ECGGVGSSVVSTQGVT-VSCSIQASVSLV 69
Query: 301 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCY---KDSKCIDLESLCIVVEE 471
+ ++ I +E + + E + + +V L C+ ++ +C+D+ + +E
Sbjct: 70 SDAPLVDIKIEGSQQLS---EKDAEDCNSVLLSLFTNNCFVRRENLRCLDVCGKPLPLE- 125
Query: 472 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRP 579
W L I +KVL+ +GN + A A A++ + P
Sbjct: 126 --WQLHIIVKVLSLEGNFLDAAVCALGAALVDAKLP 159
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
protein ZK783.1 protein.
Length = 2585
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 409 EKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECA--SIATLASIAHFRRPD 582
+KC ++C++ +S+C V ++ +L K H EC + ++ +S D
Sbjct: 413 KKCVDINECVENDSVCGGVGDRCVNLFGGFKCCQHGSTEAECTDQAFSSDSSTISSHGAD 472
Query: 583 FTRDGDRVI 609
FT G+++I
Sbjct: 473 FTTTGEQII 481
>AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical
protein R155.1a protein.
Length = 473
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 139 IVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGII 318
IV GH L G F+ET DI++ + + CI++L ++ +V +P+ ++P++ +
Sbjct: 95 IVFLGHLLIGYWFHETDTYDITWTTPF--CIMTLRFIGLVMDVYDGAQKPEHLKPDQKLT 152
Query: 319 FIN 327
I+
Sbjct: 153 AIS 155
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = -1
Query: 605 TRSPSLVKSGLLKCAIEASVAILAHSVKLPSWFRTLILILKD---QTFSSTTMQSDSRSM 435
T S +LV+ L +CA E +V I+AH + + +I+K Q + T + +D+ M
Sbjct: 685 TESEALVQQALSRCAQERTVIIVAHRLSTIEKANKIAVIVKGCLVQMGTHTELMTDTDGM 744
Query: 434 HF 429
++
Sbjct: 745 YY 746
>AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical
protein BE0003N10.1 protein.
Length = 745
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 151 GHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVT 270
G R DGR +E R + I + +GC I G+T+++S VT
Sbjct: 332 GIRCDGRRPDEFRPITIHVDMYKKLHGCSIFQRGQTQVMSTVT 374
>Z81147-3|CAB03530.1| 305|Caenorhabditis elegans Hypothetical
protein T09E11.3 protein.
Length = 305
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 406 LEKCYKDSKCIDLESLCIVVEEKVWS 483
L+KC ++++C D S I + EKV+S
Sbjct: 132 LDKCVRENRCYDCGSNMICIVEKVYS 157
>Z81520-1|CAB04223.1| 399|Caenorhabditis elegans Hypothetical
protein F31B9.1 protein.
Length = 399
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 542 ILAHSVKLPSWFRTLILILKDQTFSS 465
IL HSV+LP W R L+ +L + S+
Sbjct: 300 ILDHSVQLPQWLRLLLNVLSVMSSST 325
>Z46381-9|CAI58660.1| 807|Caenorhabditis elegans Hypothetical
protein M01F1.4b protein.
Length = 807
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 56 RIFTKKYEPITKCVILVYRIVKRISYKRSYLKDIAW 163
+I+T P +++ Y +K +SY+R+++ I+W
Sbjct: 108 KIYTTFASPNGAIIVIAYTALKILSYERTFMYIISW 143
>Z46381-8|CAA86517.2| 808|Caenorhabditis elegans Hypothetical
protein M01F1.4a protein.
Length = 808
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 56 RIFTKKYEPITKCVILVYRIVKRISYKRSYLKDIAW 163
+I+T P +++ Y +K +SY+R+++ I+W
Sbjct: 109 KIYTTFASPNGAIIVIAYTALKILSYERTFMYIISW 144
>U97001-6|AAB52257.2| 374|Caenorhabditis elegans Hypothetical
protein K08B12.1 protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 464 TTMQSDSRSMHFESL*HFSNNLTR*TVRSVCLLASNCG 351
T Q + ++MH+ L H+ NN+ + +VC +A + G
Sbjct: 303 TAAQYNRQAMHYRYLVHYDNNMGKGDGFNVCSVADDLG 340
>AF098503-1|AAC67408.1| 360|Caenorhabditis elegans Hypothetical
protein H35N09.2 protein.
Length = 360
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 93 HFVIGSYFFVNILFKEAYLAINV*LFFLGYL 1
HF +G F NILF + ++ ++ FF+ +L
Sbjct: 76 HFKLGPLGFSNILFNKFFVQLDAFTFFIDFL 106
>AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein.
Length = 1007
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 IVSLGETK-ILSEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTV 390
++ + TK ILS+V + A PKQI + I VE N F N +TD TV
Sbjct: 644 VLDIQNTKAILSKVWLKFALPKQINQAQRI----VEFNSHRETLFNINLETDGTV 694
>AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching
abnormal protein 2 protein.
Length = 1007
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 IVSLGETK-ILSEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTV 390
++ + TK ILS+V + A PKQI + I VE N F N +TD TV
Sbjct: 644 VLDIQNTKAILSKVWLKFALPKQINQAQRI----VEFNSHRETLFNINLETDGTV 694
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,751,617
Number of Sequences: 27780
Number of extensions: 310663
Number of successful extensions: 854
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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