Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m19
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113608-1|AAI13609.1| 522|Homo sapiens chromosome 6 open readi... 33 0.72
BC113606-1|AAI13607.1| 522|Homo sapiens chromosome 6 open readi... 33 0.72
BC108714-1|AAI08715.1| 522|Homo sapiens chromosome 6 open readi... 33 0.72
BC012928-1|AAH12928.1| 473|Homo sapiens C6orf150 protein protein. 33 0.72
AL603910-3|CAI14879.1| 447|Homo sapiens chromosome 6 open readi... 33 0.72
AL603910-2|CAI14878.1| 522|Homo sapiens chromosome 6 open readi... 33 0.72
AL603910-1|CAO03612.1| 505|Homo sapiens chromosome 6 open readi... 33 0.72
AK097148-1|BAC04965.1| 522|Homo sapiens protein ( Homo sapiens ... 33 0.72
M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein. 31 2.9
CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein. 31 2.9
BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complement... 31 2.9
AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complement... 31 2.9
AC018758-3|AAG09061.1| 464|Homo sapiens XRCC1 DNA repair protei... 31 2.9
AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross comp... 31 2.9
BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing prot... 31 3.8
BC049379-1|AAH49379.1| 785|Homo sapiens VCPIP1 protein protein. 31 3.8
AB065543-1|BAC05788.1| 324|Homo sapiens seven transmembrane hel... 31 3.8
AB065452-1|BAC05714.1| 324|Homo sapiens seven transmembrane hel... 31 3.8
AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein. 31 3.8
>BC113608-1|AAI13609.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>BC113606-1|AAI13607.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>BC108714-1|AAI08715.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>BC012928-1|AAH12928.1| 473|Homo sapiens C6orf150 protein protein.
Length = 473
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 236 NTGSYYEHVKISAPNEFDVMFKLEVP 261
>AL603910-3|CAI14879.1| 447|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 447
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>AL603910-2|CAI14878.1| 522|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>AL603910-1|CAO03612.1| 505|Homo sapiens chromosome 6 open reading
frame 150 protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>AK097148-1|BAC04965.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ39829 fis, clone SPLEN2012800. ).
Length = 522
Score = 33.1 bits (72), Expect = 0.72
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 484 HAGSHYDNVRINKPDEFDMVIEIGVP 561
+ GS+Y++V+I+ P+EFD++ ++ VP
Sbjct: 210 NTGSYYEHVKISAPNEFDVMFKLEVP 235
>M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 202 RPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKI 318
+PQE P K K N+ + SK +S VP PK+
Sbjct: 237 KPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKL 275
>CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 202 RPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKI 318
+PQE P K K N+ + SK +S VP PK+
Sbjct: 237 KPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKL 275
>BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 202 RPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKI 318
+PQE P K K N+ + SK +S VP PK+
Sbjct: 237 KPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKL 275
>AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 202 RPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKI 318
+PQE P K K N+ + SK +S VP PK+
Sbjct: 237 KPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKL 275
>AC018758-3|AAG09061.1| 464|Homo sapiens XRCC1 DNA repair protein
protein.
Length = 464
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 202 RPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKI 318
+PQE P K K N+ + SK +S VP PK+
Sbjct: 68 KPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKL 106
>AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross
complementing protein 1 variant protein.
Length = 647
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 202 RPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKI 318
+PQE P K K N+ + SK +S VP PK+
Sbjct: 251 KPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKL 289
>BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing protein
(p97)/p47 complex interacting protein 1 protein.
Length = 1222
Score = 30.7 bits (66), Expect = 3.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 514 YAHCRSDSRHDVPCSNICCSMDLFLSFSCEDFGILYLALCN 392
+ R+D + P +N+ CS D D+G+ L CN
Sbjct: 499 HGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACN 539
>BC049379-1|AAH49379.1| 785|Homo sapiens VCPIP1 protein protein.
Length = 785
Score = 30.7 bits (66), Expect = 3.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 514 YAHCRSDSRHDVPCSNICCSMDLFLSFSCEDFGILYLALCN 392
+ R+D + P +N+ CS D D+G+ L CN
Sbjct: 63 HGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACN 103
>AB065543-1|BAC05788.1| 324|Homo sapiens seven transmembrane helix
receptor protein.
Length = 324
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 460 CSMDLFLSFSCEDFGI---LYLALCNVVQNHFP*VVYISLICLLAETLN 323
C + L+ SC D I L ALC+ +Q V++IS C+L L+
Sbjct: 179 CDIPPLLALSCTDTQINQLLLFALCSFIQTSTFVVIFISYFCILITVLS 227
>AB065452-1|BAC05714.1| 324|Homo sapiens seven transmembrane helix
receptor protein.
Length = 324
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 460 CSMDLFLSFSCEDFGI---LYLALCNVVQNHFP*VVYISLICLLAETLN 323
C + L+ SC D I L ALC+ +Q V++IS C+L L+
Sbjct: 179 CDIPPLLALSCTDTQINQLLLFALCSFIQTSTFVVIFISYFCILITVLS 227
>AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein.
Length = 1236
Score = 30.7 bits (66), Expect = 3.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 514 YAHCRSDSRHDVPCSNICCSMDLFLSFSCEDFGILYLALCN 392
+ R+D + P +N+ CS D D+G+ L CN
Sbjct: 513 HGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACN 553
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,354,341
Number of Sequences: 237096
Number of extensions: 1330588
Number of successful extensions: 7448
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7444
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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