Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m19
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 34 0.083
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 34 0.083
U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical pr... 31 0.59
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.59
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 29 1.8
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 29 3.1
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.5
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.5
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein. 28 5.5
AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical... 28 5.5
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical pr... 27 9.5
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagella... 27 9.5
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 27 9.5
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 33.9 bits (74), Expect = 0.083
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +1
Query: 199 QRPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESL--LADISVRYIQLK 372
Q +++ +KE+ + RA K K+ S + P ++ + SL + S +++
Sbjct: 1116 QEKEKKREEKERAKREKEERATLKKEKKSKSHRFPAKTTVSKIPSLSRVGQPSSLVVEVS 1175
Query: 373 ESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVR 513
D +L +VLD+ + + EI+P + + + T G H +VR
Sbjct: 1176 GHD-QLEIRVLDSKKSEIGTDIVEIEPGHMQINFTPAQVGDHEIDVR 1221
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 33.9 bits (74), Expect = 0.083
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +1
Query: 199 QRPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESL--LADISVRYIQLK 372
Q +++ +KE+ + RA K K+ S + P ++ + SL + S +++
Sbjct: 1116 QEKEKKREEKERAKREKEERATLKKEKKSKSHRFPAKTTVSKIPSLSRVGQPSSLVVEVS 1175
Query: 373 ESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVR 513
D +L +VLD+ + + EI+P + + + T G H +VR
Sbjct: 1176 GHD-QLEIRVLDSKKSEIGTDIVEIEPGHMQINFTPAQVGDHEIDVR 1221
>U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical
protein T19A5.3b protein.
Length = 422
Score = 31.1 bits (67), Expect = 0.59
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 385 ELHYKVLDTIFQNLHKKMKEID-PYYNRYSSTVHHAGSHYDNVRINKPDEFDMVIEIGVP 561
E K ++ ++ L K I+ P N SS H+G HY ++N P + + ++E+ P
Sbjct: 61 EARRKRIEARWKRLGINFKTINHPLLNTESSESSHSGHHYTIRQLNAPKKVEKLVEVERP 120
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.1 bits (67), Expect = 0.59
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 385 ELHYKVLDTIFQNLHKKMKEID-PYYNRYSSTVHHAGSHYDNVRINKPDEFDMVIEIGVP 561
E K ++ ++ L K I+ P N SS H+G HY ++N P + + ++E+ P
Sbjct: 129 EARRKRIEARWKRLGINFKTINHPLLNTESSESSHSGHHYTIRQLNAPKKVEKLVEVERP 188
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 29.5 bits (63), Expect = 1.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 248 LLKPVFSFCVGCSCGRCGC 192
++ P F C+ C RCGC
Sbjct: 34 IVSPSFPICIAAKCSRCGC 52
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 286 ISDKVPYNPKITNLESLLADISVRYIQLKESDFELHYKVLDTIFQNLHKK 435
I DK+ N +TNL ++ I+ Y LK++ + L + +D I KK
Sbjct: 458 IIDKLAENLNLTNLFAIRTLIAYAYKSLKKTSWPLVTQKIDEIHSEFEKK 507
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 493 SRHDVPCSNICCSMDLFLSFSCEDFGILYLAL 398
+R CS C LF+S+ GIL+LAL
Sbjct: 14 NRRSGSCSGCCSKCQLFISYLLVIVGILFLAL 45
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 224 CVGCSCGRCGC 192
C GC CG CGC
Sbjct: 65 CCGCGCGCCGC 75
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 224 CVGCSCGRCGC 192
C GC CG CGC
Sbjct: 65 CCGCGCGCCGC 75
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 224 CVGCSCGRCGC 192
C GC CG CGC
Sbjct: 66 CCGCGCGCCGC 76
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 224 CVGCSCGRCGC 192
C GC CG CGC
Sbjct: 67 CCGCGCGCCGC 77
Score = 27.9 bits (59), Expect = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 224 CVGCSCGRCGC 192
C GC CG CGC
Sbjct: 120 CCGCGCGCCGC 130
>AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein.
Length = 133
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 220 TQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKESDF----- 384
T E++ NR + PE + P+N +I+ + R + +KE +F
Sbjct: 19 TAIEESPRNRQNEEPEQTSQTENLQTDPFNARISEIFEKQTVAFERQMMIKEEEFMSQMK 78
Query: 385 ---ELHYKVLDTIFQNLHKKMKEI 447
E+ K L+T +N K KEI
Sbjct: 79 EREEVKLKDLETKLENFEKWRKEI 102
>AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical
protein C29F9.2 protein.
Length = 133
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 220 TQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKESDF----- 384
T E++ NR + PE + P+N +I+ + R + +KE +F
Sbjct: 19 TAIEESPRNRQNEEPEQTSQTENLQTDPFNARISEIFEKQTVAFERQMMIKEEEFMSQMK 78
Query: 385 ---ELHYKVLDTIFQNLHKKMKEI 447
E+ K L+T +N K KEI
Sbjct: 79 EREEVKLKDLETKLENFEKWRKEI 102
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 316 ITNLESLLADISVRYIQLKESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 495
IT + L+ DI + + + E+ +H++ D+I + K D + SS H+G
Sbjct: 518 ITIADPLVIDIPIEDVAIPEN-VPIHHESCDSIDSRNNSKTHSTDSGVSSLSSNSSHSGG 576
Query: 496 HYDNVRINKPDEF-DMVIE 549
+ + P D+ IE
Sbjct: 577 DNETLTSGMPTHLRDLNIE 595
>Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical
protein F59C6.7 protein.
Length = 412
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 361 IQLKES--DFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHA 489
I LK+ D+ LH + ++++ +N+ +K+ + PY + S + A
Sbjct: 244 ITLKQDAKDWRLHLEQMNSMHKNVEQKVGNVGPYLDNMSKDIAKA 288
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 349 SVRYIQLKESDFELHYKVLDT-----IFQNLHKKMKEIDPYYNRYSSTVHHAGS 495
++R L E ++ + YK+ D IF+NL KK++ +P + Y+ G+
Sbjct: 1268 NIRVKDLTEKEYNI-YKIWDLPKLTEIFKNLKKKLEHSNPMFCHYADFKRRCGN 1320
>AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagellar
transport proteinCHE-13 protein.
Length = 412
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 361 IQLKES--DFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHA 489
I LK+ D+ LH + ++++ +N+ +K+ + PY + S + A
Sbjct: 244 ITLKQDAKDWRLHLEQMNSMHKNVEQKVGNVGPYLDNMSKDIAKA 288
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 349 SVRYIQLKESDFELHYKVLDTIFQNLHKK-MKEIDPYYNRYSSTVHH 486
S I+L + + E + K ++ +N ++ KE+D + ++S+TV+H
Sbjct: 252 STEKIELIQKEAEDYRKRIEEDIRNRQQRHKKEVDAHQEKFSATVNH 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,557,338
Number of Sequences: 27780
Number of extensions: 227489
Number of successful extensions: 987
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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