Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m17
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 119 2e-27
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 95 5e-20
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 88 6e-18
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 87 1e-17
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 60 1e-09
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 60 1e-09
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 31 0.98
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 29 2.3
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 29 3.0
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24) 29 4.0
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 28 5.2
SB_31687| Best HMM Match : DUF420 (HMM E-Value=6.3) 28 6.9
SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2) 27 9.1
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 119 bits (286), Expect = 2e-27
Identities = 62/144 (43%), Positives = 86/144 (59%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 330
TL A G D KA++ +LC R QR I+ +KT +G+DLI +LKSE+ G E+ ++
Sbjct: 92 TLDIASNKPGCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVI 151
Query: 331 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 510
ALMTP + A L A+ G+GTDE +IE+L T +N I I Y L+ + LE D+
Sbjct: 152 ALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIA 211
Query: 511 GDTSGHFKRLCVSLCMANRDENQG 582
GDTSG FK+ +SLC A +G
Sbjct: 212 GDTSGKFKKFLISLCNALYKAGEG 235
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 94.7 bits (225), Expect = 5e-20
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +1
Query: 181 TDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 360
T+E +I +L R QR+EI + +KT YGKDL+++LKSEL+GNLE ++A+M P +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61
Query: 361 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 453
AK L + G GTDEE +I+ILCT SN G R
Sbjct: 62 AKCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 35.1 bits (77), Expect(2) = 0.007
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 397 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 552
T+E +I IL SN I Y+ +YGK L +DLK + SG+ + +++
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAM 53
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVLCRR 219
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
Score = 21.8 bits (44), Expect(2) = 0.007
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 538 LCVSLCMANRDENQGIDEGSAKADAE 615
LC NRD N +D A +A+
Sbjct: 83 LCTRSNQGNRDTNMTVDMAKATKEAQ 108
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 87.8 bits (208), Expect = 6e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 333
L+KAMKGFG+DE+AII+VL + QRL IA++FK Y KDL++ELKSEL+G E+ IVA
Sbjct: 311 LKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVA 370
Query: 334 LMTPLPHFYAKELHDAVSGIGTDEEAII 417
L+ P A LH A+ + I+
Sbjct: 371 LLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVL-CRRGIVQRLE-IAETFKTNYGKDLISELKSELTGNLENVI 327
L+KA++ +D+K +V+ C +L+ +++ + Y KDL+ +L ++ ++ +
Sbjct: 52 LQKAIEK--SDKKTATEVIVCNASDEGKLKKLSDEYNKRYEKDLVEQLDGKVADDVHEAV 109
Query: 328 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 447
+L+ P + L+ A+ G+GT E +IE LCT SN G
Sbjct: 110 TSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTG 149
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +1
Query: 361 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 540
A++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + SG F+
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDA 367
Query: 541 CVSLCM 558
V+L +
Sbjct: 368 IVALLL 373
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRR 219
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 86.6 bits (205), Expect = 1e-17
Identities = 41/125 (32%), Positives = 71/125 (56%)
Frame = +1
Query: 238 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAII 417
++ + + Y KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +I
Sbjct: 477 KLNDEYNKRYKKDLVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLI 536
Query: 418 EILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDEGS 597
EILCT SN I+ I Y + YG+SL D+K +TSG F+ L +L +RDE+ +++
Sbjct: 537 EILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLETLLKGSRDESTDVNKEL 596
Query: 598 AKADA 612
DA
Sbjct: 597 VTKDA 601
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 330
+L AMKG GT E +I++LC R + EI + + YG+ L ++KSE +G+ EN++
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLE 579
Query: 331 ALM-------TPL-PHFYAKELHDAVS-GI---GTDEEAIIEILCTLSNYGIRTISAFYE 474
L+ T + K+ VS G+ GTDE+ I IL S+ ++ + A Y+
Sbjct: 580 TLLKGSRDESTDVNKELVTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYK 639
Query: 475 QLY-GKSLESDLKGDTSGHFKRLCVSLCMANRDENQ 579
L G SL ++ + G + + L +D +Q
Sbjct: 640 TLSGGVSLADTVRDEMKGDLRDALLVLISYGQDPSQ 675
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 184 DEKAIIDVLCRRGIVQRL--EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHF 357
D+K I +++ + + ++ ++ + +K Y +DL L +L +L + A++ P
Sbjct: 17 DKKKIKELVMKAAVDKKKLKKLGDDYKKQYKQDLTDALDGKLEEDLHEAVAAMLLPGNEA 76
Query: 358 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 537
A+ L+ A+ I + +E Y++ YG SLE D+K +TSG F+
Sbjct: 77 DARTLYFAMKNIDSIKEE-------------------YQKKYGCSLEDDVKEETSGDFED 117
Query: 538 LCVSL 552
L V+L
Sbjct: 118 LLVAL 122
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 241 IAETFKTNYGKDLISELKSELTGNLENVIVALMT 342
I E ++ YG L ++K E +G+ E+++VALM+
Sbjct: 91 IKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMS 124
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/132 (27%), Positives = 66/132 (50%)
Frame = +1
Query: 169 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 348
K +GTDE VL R Q + +D+++ + E++G+L+ + P
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGLQCARNPA 86
Query: 349 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 528
+F A L ++ G GTD+ +I ++ + S + I A + Q Y K++ ++GD SG
Sbjct: 87 EYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGD 145
Query: 529 FKRLCVSLCMAN 564
+K+L ++L N
Sbjct: 146 YKKLLMALPSPN 157
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 333
L K+MKG GTD+ +I V+ R V +EI +F Y K + ++ + +G+ + +++A
Sbjct: 93 LWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGDYKKLLMA 152
Query: 334 LMTP 345
L +P
Sbjct: 153 LPSP 156
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Frame = +1
Query: 154 LRKAMKGFGTD--EKAIIDVLCR----RGIVQRLEIAETFKTNYGKDLISELKSELTGNL 315
L +A++G ++ + AIID+L R R + RL+ + +K + +D++ L+ L ++
Sbjct: 353 LHQAIQGMVSEGNKDAIIDILARNCDERSKLDRLK--DKYKDQHDQDILEALQPHLGDDV 410
Query: 316 ENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 441
++ + + + F AK LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 411 KDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 184 DEKAIIDVLCRRGIVQRL-EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 360
D++ I+ +L R ++ ++ + +K Y KDL ELKS L + + +L
Sbjct: 21 DKERIMGILGRTSEKDKMNKLEDKYKDLYKKDLNEELKSVLDEEIMKALESLAEEAAMKD 80
Query: 361 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 453
AK L++A G GTDE+A+I ILCT SN G R
Sbjct: 81 AKTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRR 219
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 34.3 bits (75), Expect = 0.080
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 325 IVALMTPLPHFYAK-ELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 492
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 493 LESDLKGDTSGHFKRLC 543
+E+ LKG +S H R C
Sbjct: 597 VEA-LKGKSSWH--RFC 610
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 284 ANSRVNSPATWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYP 463
A N P T S +P T+ + ++ L+PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 464 HFTNNCTARA 493
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 348 APLLR*GAPRCCLRNWNRRRSHHRDP 425
+P L PRCC +N N R H DP
Sbjct: 138 SPFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 217 RGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVS--- 387
R +V RL+I +T + K+ L I++L+T Y + L +A+
Sbjct: 81 RNLVSRLKITFAGETLQDTNRYDVFKTYEELYLSKTILSLLTDHGELYPRALSEALLFEI 140
Query: 388 GIGTDEEAIIEILCTLSNYGIRTISAFYEQL 480
+ T ++ ++ T +YGI+ + YE L
Sbjct: 141 TLATVDQVVVGSDATKLSYGIKNLELEYENL 171
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +1
Query: 196 IIDVLCRRGIVQRLEIAETFKTNYGKD--LISELKSELTGNLENVIVALMTPLPHFYAKE 369
++ +L + I + L+ ++NYG+ L S+ S L +++++ + + +
Sbjct: 149 VVPILSFKDIQEPLDYVS--ESNYGQQVSLFSKNPSSLAPLIDSLVNQVCRVNINTKCQR 206
Query: 370 LHDAVSGIGTDEEAI--IEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 537
D + +G + A+ + + L + IRT+ AF + SDL + S +F R
Sbjct: 207 GPDVLPFVGRKDSAVSTLSVYDALRTFSIRTLVAFRSNAINDKILSDLLENESSNFLR 264
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 495
K + + VSG GTD + + I T+S ISA L+ K++
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAV 627
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 435 IENACRAGPLPNMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 494
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 498
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 495 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 539
>SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24)
Length = 285
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 171 IENACRAGPLANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 230
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 498
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 231 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 275
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 358 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 498
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 47 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 93
>SB_31687| Best HMM Match : DUF420 (HMM E-Value=6.3)
Length = 349
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 587 SMPWFSSRLAMHNDTHNLLKCPDVSPFKSDS 495
SMP FSS LA + D++N + P + K D+
Sbjct: 54 SMPHFSSILACYADSNNHVHAPKIKGGKKDA 84
>SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)
Length = 845
Score = 27.5 bits (58), Expect = 9.1
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISA----FYEQLYGKSLESDLKGDTSGH 528
K + + VSG GTD + + I T+S ISA +++L G+ LE+ + + + H
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQRLSGR-LENIMYAEGASH 641
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 575 FSSRLAMHNDTHNLLKCPDVSPFKSDSRLLPYSCS*NAD 459
+S + ++ +L C D F +D+R + SCS NA+
Sbjct: 1500 YSPHVLFYDKLDHLCLCVDARTFGNDARFVRRSCSPNAE 1538
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,201,794
Number of Sequences: 59808
Number of extensions: 366034
Number of successful extensions: 1163
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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