Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m14
(582 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 83 2e-16
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 81 6e-16
04_01_0350 - 4610444-4610668,4612181-4612969 79 2e-15
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 76 2e-14
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 74 7e-14
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 74 1e-13
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 73 1e-13
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 72 4e-13
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 70 1e-12
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 69 4e-12
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 69 4e-12
10_01_0065 + 845447-846187,846969-847193 62 3e-10
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 59 2e-09
10_01_0066 + 848523-849269,849520-849741 58 4e-09
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 52 3e-07
02_05_1228 + 35086576-35087139,35089125-35089268,35090436-350906... 48 5e-06
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 45 5e-05
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 36 0.024
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 31 0.89
05_04_0344 + 20442041-20442374,20443115-20443210,20444512-204446... 29 2.0
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 29 2.0
03_05_1050 - 29966031-29966076,29966180-29966232,29966420-299668... 29 3.6
03_02_0227 + 6576333-6577769 29 3.6
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 28 6.2
01_06_0687 - 31249036-31249341 28 6.2
12_02_0127 + 13961726-13961947,13962050-13962121,13962288-139630... 27 8.2
11_04_0318 + 16336356-16336358,16337254-16337484,16337580-163376... 27 8.2
09_02_0414 - 8825575-8826654,8826737-8827144 27 8.2
09_02_0108 - 4358051-4358645,4358722-4359137,4360307-4360903,436... 27 8.2
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 82.6 bits (195), Expect = 2e-16
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Frame = +1
Query: 112 LNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGA 291
LN G IP++GLGT+ + +PG V A++AGYR ID A Y NE +IG
Sbjct: 7 LNTGAKIPSVGLGTW---------QAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGV 57
Query: 292 AVRA---SGI-PREDIFIVTKLPMDNQ--RDVVKQLEKSLARLNMSYVDLYLIHNPVAF- 450
A++ GI REDIFI +KL N DV L+ +L L YVDLYLIH PV
Sbjct: 58 ALKKVFDEGIVKREDIFITSKLWCTNHAPEDVPVALDSTLQDLQTDYVDLYLIHWPVRMK 117
Query: 451 -NPGFKGFDIV--DYLDTWKGMEEAKNLG 528
GF G +++ D TW ME+ + G
Sbjct: 118 KGAGFGGQNVLPTDIPATWAAMEKLHDSG 146
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 81.0 bits (191), Expect = 6e-16
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Frame = +1
Query: 97 ASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNE 276
A LN G IP++GLGT+ + PG V A++AGYR ID A +Y NE
Sbjct: 2 AKHFVLNTGAKIPSVGLGTW---------QSDPGVVGDAVYAAVKAGYRHIDCARMYKNE 52
Query: 277 DQIGAAVRA----SGIPREDIFIVTKLPMDNQ--RDVVKQLEKSLARLNMSYVDLYLIHN 438
+++G A++ + RED+FI +KL D DV + L+K+L+ L + Y+DLYLIH
Sbjct: 53 NEVGIALKKLFEEGVVKREDLFITSKLWCDCHAPEDVPESLDKTLSDLQLEYLDLYLIHW 112
Query: 439 PVAFNPGFKGFDIVDYL-----DTWKGMEEAKNLGPS 534
P G + DY+ TW ME+ + G S
Sbjct: 113 PFRVKKGSGISNTEDYIPPDIPSTWGAMEKLYDSGKS 149
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 79.4 bits (187), Expect = 2e-15
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Frame = +1
Query: 106 ISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQI 285
++LN G+++P LG GT P D + A+ GYR +DTAA+Y E +
Sbjct: 23 VTLNSGHAMPVLGFGT--------GSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAV 74
Query: 286 GAAV----RASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPV 444
GAAV R + R ++F+ TKL M + VV L +SL+RL + YVDL+LIH PV
Sbjct: 75 GAAVAEAVRCGAVASRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPV 134
Query: 445 A-----------FNPGFKGFDIVDYLDTWKGMEEAKNLG 528
A ++ +G D W+GMEE LG
Sbjct: 135 AIGKKDAAGELTWDDLSRGLVPFDMEGVWRGMEECHRLG 173
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 75.8 bits (178), Expect = 2e-14
Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +1
Query: 121 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAA-- 294
G +P +G+GT + + +P + V A+EAGYR DTAA Y E IG A
Sbjct: 12 GFGMPRVGMGTAV-------QGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAA 64
Query: 295 --VRASGIP-REDIFIVTKL-PMDNQRD-VVKQLEKSLARLNMSYVDLYLIHNPVAFNPG 459
VR+ I R D+FI +KL D RD V+ L ++L L M YVDLYL+H PV+ PG
Sbjct: 65 EAVRSGAIASRADLFITSKLWCSDAHRDRVLPALRQTLWNLQMEYVDLYLVHWPVSMKPG 124
Query: 460 -----FKGFDIV--DYLDTWKGMEEAKNLG 528
F D V D W+ MEE LG
Sbjct: 125 RYKAPFTADDFVPFDMRAVWEAMEECHRLG 154
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 74.1 bits (174), Expect = 7e-14
Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Frame = +1
Query: 118 DGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAV 297
D +PA+G+G + P + V ALEAG+R DTA+LY E +G A+
Sbjct: 14 DARPMPAVGMGV-------AEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAI 66
Query: 298 RAS---GI--PREDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNP 456
+ G+ RE+ F+ TKL V+ L +SL L M YVDLYLIH P++ P
Sbjct: 67 AEATRRGLLASREEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEYVDLYLIHLPISVKP 126
Query: 457 G-----FKGFDIV--DYLDTWKGMEEAKNLG 528
G K D+V D+ W+ MEE LG
Sbjct: 127 GPMVFPVKKEDVVPFDFGGVWRAMEECHRLG 157
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 73.7 bits (173), Expect = 1e-13
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +1
Query: 76 ATTGGGKASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDT 255
A G G + ++L+ G+++P++GLG + D +++ + AL GYR D
Sbjct: 3 AAQGSGVPAALALSSGHTMPSVGLGVWR-MDSPAIRDL--------IHSALRIGYRHFDC 53
Query: 256 AALYLNEDQIGAAV----RASGIPREDIFIVTKLPMDNQRDVVKQLEKSLARLNMSYVDL 423
AA Y NE ++G A+ + + RED+FI TKL + VV+ + SL +L + Y+DL
Sbjct: 54 AADYQNEAEVGDALAEAFQTGLVKREDLFITTKLWNSDHGHVVEACKDSLKKLRLDYLDL 113
Query: 424 YLIHNPVA 447
YLIH PVA
Sbjct: 114 YLIHFPVA 121
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 73.3 bits (172), Expect = 1e-13
Identities = 54/150 (36%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Frame = +1
Query: 121 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAV- 297
G +PA+G+GT P ALE G+R DTAALY E +G A+
Sbjct: 14 GRPMPAVGVGT------ADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAPLGEAIA 67
Query: 298 ----RASGIPREDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNPG 459
R RE++F+ TKL V+ L +SL L M YVDLYL+H P++ PG
Sbjct: 68 EATRRGLVASREEVFVTTKLWCTQCHPGLVLPSLRESLRNLQMEYVDLYLVHWPISVKPG 127
Query: 460 -----FKGFDIV--DYLDTWKGMEEAKNLG 528
K D V D+ W+ MEE LG
Sbjct: 128 PPMLPVKREDAVPFDFEGVWRAMEECHRLG 157
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 71.7 bits (168), Expect = 4e-13
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Frame = +1
Query: 97 ASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNE 276
A+ +LN G IP++GLGT+ + G V A++AGYR ID A LY NE
Sbjct: 2 ATHFTLNTGARIPSVGLGTY---------KAGTGVVADVVSAAVKAGYRHIDCAPLYKNE 52
Query: 277 DQ-IGAAVRA----SGIPREDIFIVTKLPMDN--QRDVVKQLEKSLARLNMSYVDLYLIH 435
+ IG A++ + RED+FI +K+ + DV ++ +L L + YVDLYLIH
Sbjct: 53 QEVIGGALKKLFDDGVVKREDLFITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIH 112
Query: 436 NPVAFNPGF----KGFDIVDYLDTWKGMEEAKNLG 528
P G + F D TW+ ME+ + G
Sbjct: 113 WPFQIKKGTELSPENFVKPDIPSTWRAMEQLYDSG 147
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 70.1 bits (164), Expect = 1e-12
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Frame = +1
Query: 121 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVR 300
G ++PA+GLGT G++ + + ALE GYR IDTA++Y +E +G AV
Sbjct: 25 GRAVPAVGLGT-ASLRSVGEESFRGA-----LLAALEVGYRHIDTASVYGSERVVGEAVA 78
Query: 301 AS---GIP--REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNP- 456
+ G+ RE++F+ TK+ V+ L +SL L M YVD+YL+H P++ P
Sbjct: 79 GAARRGVIACREEVFVTTKVWCTQCHPDLVLPSLRESLQNLQMEYVDMYLVHWPMSVKPT 138
Query: 457 ----GFKGFDI--VDYLDTWKGMEEAKNLG 528
K DI +D W+ MEE LG
Sbjct: 139 KPHYPMKREDIMPMDLRGVWQAMEECHQLG 168
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Frame = +1
Query: 109 SLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIG 288
+L G +P +G+GT F + P V A++AGYR DTAA Y E +G
Sbjct: 20 ALRSGKPMPLVGMGT-ASFPLDAPQ--LPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLG 76
Query: 289 AAV----RASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVA 447
AV RA + R+D++I +KL + + V+ L ++L L M Y+DLYLIH P+
Sbjct: 77 EAVLEAVRAGMVASRDDLYITSKLWISDTHPGRVLPALRRTLRNLQMVYIDLYLIHWPIR 136
Query: 448 F-------NPGF-KGFDIVDYLDTWKGMEEAKNLG 528
+P + F ++D WK MEE + LG
Sbjct: 137 LRVEQETPSPVYDNDFVMMDMEGVWKDMEECQRLG 171
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 68.5 bits (160), Expect = 4e-12
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Frame = +1
Query: 109 SLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNE---- 276
+L+ G +P +G+GT F G + P + V A+EAGYR DTAA+Y E
Sbjct: 5 ALSSGKPMPRVGMGT-ASFP-LGATD--PSTVKDVVLRAIEAGYRHFDTAAVYQTEAILG 60
Query: 277 DQIGAAVRASGIP-REDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVA 447
D + AVRA + R++++I +KL + + V+ L ++L ++ M Y+DLYLIH PV+
Sbjct: 61 DAVAEAVRAGLVASRDELYITSKLWVAHAHPGHVLPSLRRALRKMQMEYLDLYLIHFPVS 120
Query: 448 F-------NPGFKGFDIV--DYLDTWKGMEEAKNLG 528
+ + D+V D WK MEE + LG
Sbjct: 121 MRLAEDPESMTYSKDDLVMMDMEGVWKEMEECQRLG 156
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Frame = +1
Query: 223 ALEAGYRLIDTAALYLNEDQIGAAVRAS---GI--PREDIFIVTKLPMDNQRD--VVKQL 381
A+E GYR DTA +Y E +G AV + G+ R D+F+ +K+ + VV
Sbjct: 41 AIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAA 100
Query: 382 EKSLARLNMSYVDLYLIHNPVAFNPGFKGF----DIV----DYLDTWKGMEEAKNLG 528
++L L M YVDL L+H PV+ PG F +++ D W+GMEE LG
Sbjct: 101 RETLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLG 157
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = +1
Query: 226 LEAGYRLIDTAALYLNEDQIGAAVRA---SGIPREDIFIVTKLPMDN--QRDVVKQLEKS 390
L+AGYR +DTAA Y E ++G ++A +GI R+D+F+ +K+ N V L+ +
Sbjct: 89 LQAGYRHVDTAAQYGIEQEVGKGLKAAMEAGINRKDLFVTSKIWCTNLAPERVRPALKNT 148
Query: 391 LARLNMSYVDLYLIHNPVAFNPG 459
L L + Y+DLYLIH P G
Sbjct: 149 LKDLQLDYIDLYLIHWPFRLKDG 171
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 58.4 bits (135), Expect = 4e-09
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Frame = +1
Query: 223 ALEAGYRLIDTAALYLNEDQIGAAV-----RASGIPREDIFIVTKLPMDNQRD--VVKQL 381
A+E GYR DTA LY E + AV R R D+F+ +KL + VV
Sbjct: 43 AIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAA 102
Query: 382 EKSLARLNMSYVDLYLIHNPVAFNPGFKGFDI--------VDYLDTWKGMEEAKNLG 528
++L L M YVDL L+H P PG F D W+GMEE LG
Sbjct: 103 RETLRNLGMDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLG 159
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 52.4 bits (120), Expect = 3e-07
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Frame = +1
Query: 97 ASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNE 276
A LN G IP++GLGT+ + PG V A++AGYR ID A+ Y NE
Sbjct: 2 AKHFVLNTGAKIPSVGLGTW---------QSDPGVVGNAVYAAVKAGYRHIDCASAYNNE 52
Query: 277 DQIGAAVRASGIPREDIF------IVTKLPMDN-----QRDVVKQLEKSLARLNMSYVDL 423
++G A++ E F ++ + D DV + L+ +L L + Y+DL
Sbjct: 53 KEVGLALKKLFEEVELEFQCLLGALLQLIRGDGCDHHAPEDVPEALDATLNDLQLEYLDL 112
Query: 424 YLIHNPVAFNPGFKGFDIVDYL-----DTWKGMEEAKNLGPS 534
YLIH P G YL TW ME+ + G S
Sbjct: 113 YLIHWPFRTKKGSSIGKPESYLPPDIPSTWAAMEKLYDSGKS 154
>02_05_1228 +
35086576-35087139,35089125-35089268,35090436-35090600,
35090722-35090796,35091468-35091671
Length = 383
Score = 48.0 bits (109), Expect = 5e-06
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Frame = +1
Query: 121 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLN---EDQIGA 291
G + L G ++ F Q +VK +++ ++ +AG D A +Y N E+ +G
Sbjct: 10 GLRVSQLSYGAWVTFGN--QLDVK--EAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQ 65
Query: 292 AVRASGIPREDIFIVTKL------PMD---NQRDVVKQLEKSLARLNMSYVDLYLIHNPV 444
A+R G R D+ + TKL P D +++ +V+ L SL RL+M YVD+ H P
Sbjct: 66 AMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPD 125
Query: 445 AFNP 456
A P
Sbjct: 126 ATTP 129
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Frame = +1
Query: 214 VKWALEAGYRLIDTAALY---LNEDQIGAAVRASGIPREDIFIVTKLPMDNQ------RD 366
V+ AL+ G DT+ Y ++E +G +RA+G+PR+ + TK +
Sbjct: 150 VRRALDLGINFFDTSPYYGGTVSESVLGDCLRAAGVPRDRFVVATKCGRYREGFDFSAAR 209
Query: 367 VVKQLEKSLARLNMSYVDLYLIHN 438
V + +++SLARL + YVD+ H+
Sbjct: 210 VTRSVDESLARLGLDYVDILHCHD 233
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 277 DQIGAAVRASGIPREDIFIV--TKLPMDNQRDVVKQLEKSLARLNMSYVDLYLIHNPVAF 450
D+I A + SG F+ K+ + ++ + +EKSL+RL+ Y+DL IH P +
Sbjct: 124 DKIILATKVSGYSERSTFLRDNAKVVRVDAANIKESVEKSLSRLSTDYIDLLQIHWPDRY 183
Query: 451 NPGF 462
P F
Sbjct: 184 VPLF 187
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 30.7 bits (66), Expect = 0.89
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Frame = +1
Query: 223 ALEAGYRLIDTAALY--------LNEDQIGAAVRASGIPRE-DIFIVTK---LPMDNQR- 363
+++ G L DTA +Y +E +G ++ + D+ + TK LP R
Sbjct: 96 SIDNGMTLFDTAEVYGTALMGAVNSESLLGGFIKERQEKEQIDVAVATKFAALPWRFGRG 155
Query: 364 DVVKQLEKSLARLNMSYVDLYLIHNP 441
V+ L+KSL RL +S V+LY +H P
Sbjct: 156 SVLSALKKSLDRLGLSSVELYQLHWP 181
>05_04_0344 +
20442041-20442374,20443115-20443210,20444512-20444633,
20444781-20445029,20445300-20445549,20446036-20446262
Length = 425
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 LPMDNQ-RDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGFDIVD 483
+P +++ + +V L +L R +VD Y + + V NP GF +VD
Sbjct: 309 IPFNSKVKSMVNTLNVNLPRAKFIFVDTYAMISEVLRNPWSYGFSVVD 356
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 24 NEVHRVCYNNFNCSSVGSDHWWW*SFKDLAERW 122
N+++R CYN S WWW D+++ W
Sbjct: 96 NDINRWCYNATTRSMDAESTWWW----DVSDSW 124
>03_05_1050 -
29966031-29966076,29966180-29966232,29966420-29966845,
29966983-29967060,29967135-29967220,29969054-29969155,
29969221-29969427,29970528-29970885,29971011-29971174,
29971258-29971366,29971595-29971600
Length = 544
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +1
Query: 70 SEATTGGGKASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLI 249
S GGG A SLN G +I GL + LG G + PG S P L G R+
Sbjct: 103 SRVNVGGGPAFSSSLNIGGTIQ--GLSSNLG--AGGNRNSVPGMSVSPALGNL--GPRIT 156
Query: 250 DTAALYLNEDQIGAAVRASGI 312
+ + IG + + G+
Sbjct: 157 GSVGNIVGGSNIGRNISSGGL 177
>03_02_0227 + 6576333-6577769
Length = 478
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +1
Query: 70 SEATTGGGKASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWAL 228
S+ +GGGK+ +LND S +G + G + G K W L
Sbjct: 154 SQLASGGGKSDFTALNDATSFEFIG-EAYFGVRPSASSSLGTGGPTKAALWLL 205
>11_01_0334 +
2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 139 LGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVRASGI 312
LG+G L F EK Q+ ++ D+E+ K L A + D Q+G+ R G+
Sbjct: 792 LGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGM 849
>01_06_0687 - 31249036-31249341
Length = 101
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 148 GTFLGFDEKGQKEVKPGDSEKPVKWALE 231
GT G D++G + KP + V W +E
Sbjct: 25 GTLAGVDKRGARMTKPSATSSGVAWTME 52
>12_02_0127 +
13961726-13961947,13962050-13962121,13962288-13963058,
13963401-13963573,13963973-13964083,13964114-13964460,
13964627-13964652
Length = 573
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 354 QSERRGETIGEVFGEIEHELRRSVLDTQS 440
Q ER ETI E F E E R +VLDT S
Sbjct: 457 QYERIAETIYECFKEQESLTRNTVLDTWS 485
>11_04_0318 +
16336356-16336358,16337254-16337484,16337580-16337654,
16337741-16337839,16339010-16339121,16339586-16339713,
16340022-16340141,16340967-16341047,16341460-16341537,
16341616-16341708,16341880-16341934,16342795-16342871,
16343008-16343079,16343159-16343242,16343620-16343739,
16343824-16343892,16344721-16344798,16345684-16345822,
16345990-16346154,16346239-16346384,16346501-16346680,
16346834-16346922,16346997-16347028,16347120-16347226
Length = 810
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 130 IPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVRASG 309
+P+LG+G+ + +G+ V GD E P K L+ + + T AL E Q+ V +
Sbjct: 360 LPSLGVGSLSAREAEGRANVSTGDKE-PHK-LLQPVDKTLKTMALEFAEYQVCVDVFLTT 417
Query: 310 IPREDIFIVTKLP 348
DI ++ +P
Sbjct: 418 QSYVDIASISVVP 430
>09_02_0414 - 8825575-8826654,8826737-8827144
Length = 495
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 166 DEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVRASGIPRE 321
++K Q E+ D+ P+++ L G + T LNE Q G AVR + +E
Sbjct: 305 NQKKQLELLTADASWPIEFQL--GRHQLMTGTSKLNEHQQGVAVRDEMLEKE 354
>09_02_0108 -
4358051-4358645,4358722-4359137,4360307-4360903,
4361068-4361139,4361236-4361370,4361485-4361585,
4362719-4362863
Length = 686
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 354 QSERRGETIGEVFGEIEHELRRSVLDTQS 440
Q ER ETI E F E E R +VLDT S
Sbjct: 378 QYERIAETIYECFKEQESLTRNTVLDTWS 406
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,170,760
Number of Sequences: 37544
Number of extensions: 340110
Number of successful extensions: 1050
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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