Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m14
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.9  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +1

Query: 268 LNEDQIGAAVR--ASGIPREDIFIVTKLPMDNQRDVVKQLEKSLARLNMSYVDLYLIHNP 441
           L   QIG + +  AS +   ++ +  +   +N R +VKQ++   A    +   LYL +N 
Sbjct: 309 LRAKQIGFSDKQIASVVKSSELAVRIQRQENNIRPMVKQIDTVAAEWPATTNYLYLTYNG 368

Query: 442 VAFNPGFKG 468
              +  F G
Sbjct: 369 TVHDVEFPG 377


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 83  LVVVKLQRSR*TMVTLSRLWVSAPSSGSTRKDRKKLSQ 196
           L+ +KL+RSR    T++R  +S  ++      RK  +Q
Sbjct: 243 LIAIKLRRSRMLTATVNRNHLSGGTNHWDSGRRKSAAQ 280


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 10  QYPCTMRCIVFVITTLIVHLSEA 78
           ++PC M C V V T L   L++A
Sbjct: 340 EHPCVMDCKVGVRTYLESELAKA 362


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 10  QYPCTMRCIVFVITTLIVHLSEA 78
           ++PC M C V V T L   L++A
Sbjct: 255 EHPCVMDCKVGVRTYLESELAKA 277


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 10  QYPCTMRCIVFVITTLIVHLSEA 78
           ++PC M C V V T L   L++A
Sbjct: 574 EHPCVMDCKVGVRTYLESELAKA 596


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = +1

Query: 85  GGGKASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKP 213
           G G  +  + N+G+     GLG +    + G+ ++ P     P
Sbjct: 258 GNGNGASNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTP 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,189
Number of Sequences: 438
Number of extensions: 3703
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)