Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m13
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 2e-35
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 77 1e-14
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 77 1e-14
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 67 1e-11
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 66 2e-11
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 64 1e-10
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 62 3e-10
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 60 1e-09
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 60 1e-09
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 46 2e-05
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 46 2e-05
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 44 7e-05
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 44 1e-04
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 42 3e-04
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 39 0.003
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 37 0.015
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.023
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 31 0.55
SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26) 31 0.72
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 31 0.96
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 30 1.3
SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11) 30 1.7
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 30 1.7
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 29 2.2
SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59) 29 2.2
SB_31743| Best HMM Match : IncA (HMM E-Value=1.4) 29 2.9
SB_20223| Best HMM Match : IncA (HMM E-Value=1.4) 29 2.9
SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3) 29 2.9
SB_47226| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_17511| Best HMM Match : Flagellin_IN (HMM E-Value=5.6) 29 2.9
SB_5262| Best HMM Match : IncA (HMM E-Value=2.1) 29 2.9
SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1) 29 3.9
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 29 3.9
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_45370| Best HMM Match : Flagellin_IN (HMM E-Value=6.9) 29 3.9
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_19157| Best HMM Match : FLO_LFY (HMM E-Value=0.27) 29 3.9
SB_14945| Best HMM Match : Herpes_US9 (HMM E-Value=1.7) 28 6.7
SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 6.7
SB_45146| Best HMM Match : DUF504 (HMM E-Value=9.8) 27 8.9
SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_33267| Best HMM Match : F5_F8_type_C (HMM E-Value=3.4e-10) 27 8.9
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 146 bits (353), Expect = 2e-35
Identities = 75/144 (52%), Positives = 87/144 (60%)
Frame = +2
Query: 173 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 352
MVKET YYDIL V P T E HPDKNP+EG++FKQISQAYEVLS+ K
Sbjct: 60 MVKETAYYDILNVPPTATATEIKKSYRKLALKYHPDKNPDEGDRFKQISQAYEVLSDEKK 119
Query: 353 RRIYDQGGEQALKEXXXXXXXXXXPMDLFDMXXXXXXXXXXXXXXXXXXDVIHQLSVTLE 532
R+IYD+GGE A+K PMD+FDM D++HQL VTLE
Sbjct: 120 RKIYDEGGEDAIK-GGGEGGGFHSPMDIFDM--FFGTGRAAHQGERRGKDMVHQLRVTLE 176
Query: 533 ELYCGTVRKLTLQKNVICEKCEGR 604
ELY G R+L LQKNVIC KC+GR
Sbjct: 177 ELYNGATRQLALQKNVICSKCDGR 200
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 361
+T YD+LGV N + ++ HPDKNP+ GEKFK I+ AYE+LS+P+KR +
Sbjct: 3 DTRLYDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKREL 62
Query: 362 YDQGGEQALKE 394
YD+ GE+ L+E
Sbjct: 63 YDRYGEKGLRE 73
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 361
+T YD+LGV N + ++ HPDKNP+ GEKFK I+ AYE+LS+P+KR +
Sbjct: 3 DTRLYDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTGEKFKDITFAYEILSDPEKREL 62
Query: 362 YDQGGEQALKE 394
YD+ GE+ L+E
Sbjct: 63 YDRYGEKGLRE 73
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
YYDILGVK + + E HPDKN + G EKFK+I++AYEVLS+P KR I+
Sbjct: 5 YYDILGVKKDASDQELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSDPQKREIF 64
Query: 365 DQGGEQALK 391
DQ GE+ LK
Sbjct: 65 DQYGEEGLK 73
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
YY +L V + D+ HPDKN + G EKFK+IS+AYEVLS+P K+ IY
Sbjct: 5 YYAVLNVDKAASADDIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSDPKKKEIY 64
Query: 365 DQGGEQALK 391
DQ GE+ LK
Sbjct: 65 DQYGEEGLK 73
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
YY ILGV N + D+ HPDKN N G EKFK+IS+AY+VL++P +R I+
Sbjct: 5 YYAILGVPRNASDDDIKKAYRRQALIFHPDKNKNSGAEEKFKEISEAYKVLTDPRQRDIF 64
Query: 365 DQGGEQALK 391
D GE+ LK
Sbjct: 65 DMYGEEGLK 73
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 361
E+ YY++LGV+ N TTD+ HPDKN E FK++S+AYEVL +P +R
Sbjct: 2 ESNYYEVLGVERNATTDDIRRAYRRLALKYHPDKNAGTEENFKEVSEAYEVLCDPQQRER 61
Query: 362 YDQ 370
+D+
Sbjct: 62 FDK 64
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 173 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNP 346
+V YY ILGV N + + HPDKN + EKF+++++AYEVLS+
Sbjct: 21 LVMAKDYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVLSDE 80
Query: 347 DKRRIYDQGGEQALK 391
+KRR YDQ GE+ LK
Sbjct: 81 NKRRQYDQFGEEGLK 95
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN--PNEGEKFKQISQAYEVLSNPDKRRIY 364
YYDILG+ + T + HPDKN P+ KF+Q ++AY+VLS+P KR IY
Sbjct: 5 YYDILGLTRSATDADIKKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSDPKKRAIY 64
Query: 365 DQGGEQALK 391
+Q GE+ LK
Sbjct: 65 NQFGEEGLK 73
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 60.5 bits (140), Expect = 1e-09
Identities = 47/152 (30%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
Frame = +2
Query: 107 SRFDI*FCDLCI*L*TYLGIIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN 286
+RF + FC + L I+ + +Y ILGV + + ++ HPDKN
Sbjct: 2 ARFHVYFCISLL----ILFSIQTLAGRDFYAILGVPRDASKNQIKRAYRKLAMKLHPDKN 57
Query: 287 ---PNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKEXXXXXXXXXXPMDL--FDMXX 451
P EKF I AYEVL++ D+R+IYDQ GE+ LK F
Sbjct: 58 KDDPKAQEKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGHRDHSDPFSSFFGGFGFHF 117
Query: 452 XXXXXXXXXXXXXXXXDVIHQLSVTLEELYCG 547
D+ L VTLEELY G
Sbjct: 118 DGHNGHSHSQQVPRGSDLTVDLEVTLEELYNG 149
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE----KFKQISQAYEVLSNPDKRR 358
YY++LGV + + ++ HPDKNP E KFK++S+AYEVLS+ +KR
Sbjct: 5 YYEVLGVPRSASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKRD 64
Query: 359 IYDQGGEQAL 388
IYD+ G++ L
Sbjct: 65 IYDKYGKEGL 74
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
YY ILGV PN E HPD N ++ EKF+++S+AYEVLS+ KR+ Y
Sbjct: 60 YYKILGVPPNANQKEIKKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSDDGKRKAY 119
Query: 365 DQGGE 379
D G+
Sbjct: 120 DSFGQ 124
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK----FKQISQAYEVLSNPDKRR 358
+Y++LGV+ + HPDKN + E+ F++I QAY+VLS+P +R
Sbjct: 5 HYEVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDPQERA 64
Query: 359 IYDQGGEQALK 391
YD+ EQ L+
Sbjct: 65 FYDKHREQILR 75
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 164 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK-----FKQISQAY 328
++K ++ YY ILG+K NC E HPD E +K F I+ A
Sbjct: 200 LLKQSQKRDYYKILGLKRNCNKREITKAYRKLAVKWHPDNYKGEDKKKAEKMFIDIAAAK 259
Query: 329 EVLSNPDKRRIYDQG 373
EVL++P+KR YD G
Sbjct: 260 EVLTDPEKRAKYDAG 274
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +2
Query: 167 IKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK--------FKQISQ 322
+K K YY IL + + DE HPD++ ++ FK++++
Sbjct: 152 LKKSKRKDYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNE 211
Query: 323 AYEVLSNPDKRRIYDQG 373
AY +LS+P K+R YD G
Sbjct: 212 AYSILSDPKKKRRYDSG 228
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +2
Query: 167 IKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK--------FKQISQ 322
+K K YY IL + + DE HPD++ ++ FK++++
Sbjct: 152 LKKSKRKDYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNE 211
Query: 323 AYEVLSNPDKRRIYDQG 373
AY +LS+P K+R YD G
Sbjct: 212 AYSILSDPKKKRRYDSG 228
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK---FKQISQAYEVLSNPDKRRI 361
YY++LGV P + + HPD++ +K F++I++AY VL N + R+
Sbjct: 73 YYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQ 132
Query: 362 YDQG 373
YD+G
Sbjct: 133 YDRG 136
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK---FKQISQAYEVLSNPDKRRI 361
YY++LGV P + + HPD++ +K F++I++AY VL N + R+
Sbjct: 73 YYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQ 132
Query: 362 YDQG 373
YD+G
Sbjct: 133 YDRG 136
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE----KFKQISQAYEVLSN 343
YYDIL V + + + HPDKNP E KFK+IS+AYEVLS+
Sbjct: 4 YYDILEVPRSASEQDIKKSYRKLALKWHPDKNPQNKEEAERKFKEISEAYEVLSD 58
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYEVLSNPDKR 355
YD+LGV + E HPD+ ++GEK F+ +S++Y +LS+ +KR
Sbjct: 17 YDVLGVSKTASESEIKRAYRKISLQVHPDR-ADKGEKEKATRKFQALSKSYCILSDKEKR 75
Query: 356 RIYDQGGE 379
IYD+ GE
Sbjct: 76 AIYDESGE 83
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE---GEKFKQISQAYEVLSNPDKRRI 361
YYD LGV + T E HPDKNP+ E F ++S+A EVL++P R
Sbjct: 8 YYDTLGVHKDSTEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLTDPKARAA 67
Query: 362 YD 367
++
Sbjct: 68 FN 69
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 164 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVL 337
I++ VK+ +Y +LGV+ T E HPD+N + KF+++ EVL
Sbjct: 2476 IVEEVKDN-FYQVLGVETTATQAEIRRAYRRISLQLHPDRNKEDDAELKFRKLVAVAEVL 2534
Query: 338 SNPDKRRIYD 367
+ DKR+ YD
Sbjct: 2535 KDEDKRKRYD 2544
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 179 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFK---QISQAYEVLSNPD 349
K+ +Y+IL V + + E HPD NP++ + K ++S+AY LS+
Sbjct: 5 KKKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSA 64
Query: 350 KRRIYD 367
+R+ YD
Sbjct: 65 RRQQYD 70
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 179 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFK---QISQAYEVLSNPD 349
K+ +Y+IL V + + E HPD NP++ + K ++S+AY LS+
Sbjct: 66 KKKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSA 125
Query: 350 KRRIYD 367
+R+ YD
Sbjct: 126 RRQQYD 131
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
+YD++ + P T E HPD N + E+F +++ AY LS + RR Y
Sbjct: 52 HYDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREY 111
Query: 365 DQ 370
D+
Sbjct: 112 DK 113
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
+YD++ + P T E HPD N + E+F +++ AY LS + RR Y
Sbjct: 199 HYDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREY 258
Query: 365 DQ 370
D+
Sbjct: 259 DK 260
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 28.3 bits (60), Expect(2) = 0.023
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 305 FKQISQAYEVLSNPDKRRIY 364
F ++ +AYEVLS+P+ + IY
Sbjct: 202 FSKVQKAYEVLSDPETKAIY 221
Score = 26.6 bits (56), Expect(2) = 0.023
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK 304
E YY +L V+ DE HPDK+ + +K
Sbjct: 129 EVDYYAVLAVRKEANEDELKAAYRRLCVLYHPDKHTDPEKK 169
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 34.3 bits (75), Expect = 0.078
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDK---NPNEGEK-FKQISQAYEVLSNPD 349
E Y +LG+ + T +E HPD+ N E +K F +I +AYE+LS
Sbjct: 792 EKNSYRVLGLTEDATQEEIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLK 851
Query: 350 KRR 358
+R
Sbjct: 852 TKR 854
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 352
Y +L + + E HPDK + KF +I++AYE +S+ +K
Sbjct: 1250 YAVLEIDRGASVAEIRRQYRSLSKKYHPDKETGDPRKFMRIAKAYEAVSDFNK 1302
>SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26)
Length = 680
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 269 ILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCLSMFTIKCTNHKIKYRIGCY 102
+++L F RLSL+ W N + + KC++ L+ F C + I Y
Sbjct: 219 VVDLYFSRLSLLESWKNFILQSKCYHRLQVLVILMAEMAFYTFCVQGTLLPNIPLY 274
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 278 DKNPNEGEKFKQISQAYEVLSNPDKRRIYD 367
D N +KF+ I+ AYE L +P++R YD
Sbjct: 74 DDKENAIKKFQLIATAYETLKDPEQRNDYD 103
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/100 (24%), Positives = 40/100 (40%)
Frame = -1
Query: 593 ISHRSRSFEASVF*LCHSTTPPMLLIIDELHLCLCVPCGVYLH*IHLQRTCQRDPLVKKI 414
I H +S+ + H + +++II H P + IH ++ I
Sbjct: 100 IIHHHHPSSSSIIIIHHHPSSSIIIIIHHHH-----PSSSSIIIIHHHHPSSSSIII--I 152
Query: 413 HHHYHPLPLMLVHHLDHKFAFCQDSRAPHRPEISV*ISHP 294
HHH+HP +++ H H + H P S+ I HP
Sbjct: 153 HHHHHPSSSIIIIHHHHPSSSSIIIIIHHHPS-SIIIHHP 191
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Frame = -1
Query: 593 ISHRSRSFEASVF*LCH-----STTPPMLLIIDELHLCLCVPCGVYLH*IHLQRTCQRDP 429
I H +S+ + H S++ +++II H + +H H +
Sbjct: 248 IHHHHHPSSSSIIIIIHHHHHPSSSSSIIIIIHHHHHPSSSSSIIIIHHHHHPSSSSSII 307
Query: 428 LVKKIHHHYHPLP----LMLVHHLDHKFAFCQDSRAPHRPEISV*ISHPHLGSCQGGILE 261
++ IHHH+HP ++++HH H S H P + HP
Sbjct: 308 IIIIIHHHHHPSSSSSIIIIIHH--HHHPSSSSSIIHHHPSSIIIHHHPSSSIIHHPSSI 365
Query: 260 LIFDRLSLIHQWCNLVSRP 204
+ S+IH +++ P
Sbjct: 366 IHHHPSSIIHHPSSIIHHP 384
>SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11)
Length = 340
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 272 HPDKNPNEGEKFKQISQAYEVLSNPDKRRIYD 367
HPDKN + E+ + I AY L + + R Y+
Sbjct: 167 HPDKNGGDAEQARNIIMAYSCLEDDETRARYN 198
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 29.9 bits (64), Expect = 1.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 416 IHHHYHPLPLMLVHHLDH 363
+HHH+HPL + ++H H
Sbjct: 154 VHHHHHPLSIAIIHRHRH 171
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 515 LSVTLEELYCGTVRKLTLQKNVI 583
L V+LEELY G+VRKL + V+
Sbjct: 107 LPVSLEELYIGSVRKLRINHQVL 129
>SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59)
Length = 483
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYIFCDIVDRTKCFALGEPSNVLACL 99
>SB_31743| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYVFCDIVDRTKCFALDEPSNVLACL 99
>SB_20223| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 400
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 134 LEVTLSKIEAIYVFCDIVDRTKCFALDEPSNVLACL 169
>SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3)
Length = 615
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 278 QGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
+GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 560 EGGPLKMALTKIEALYICCDIVDRTQCLSLGEPSNVLACL 599
>SB_47226| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYIYCDIVDRTKCFALDEPSNVLACL 99
>SB_17511| Best HMM Match : Flagellin_IN (HMM E-Value=5.6)
Length = 265
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 102 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSTVLACL 137
>SB_5262| Best HMM Match : IncA (HMM E-Value=2.1)
Length = 597
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 278 QGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
+GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 280 EGGPLKMALTKIEALYICCDIVDRTQCLSLGEPSNVLACL 319
>SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1)
Length = 409
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 133 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSNVLACL 168
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 416 IHHHYHP-LPLMLVHHLDHKFAFCQDSRAPHRPEISV*ISHPHLGSCQGGILELI 255
IHHH+HP ++++HH I + I H H S I+ +I
Sbjct: 31 IHHHHHPSSSIIIIHHPSSIIIIIHHHHPSSSSIIIIIIHHHHHPSSSSSIIIII 85
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 275 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 163 GGALKVALPKIEALYICCDIVDRTQCLSLGEPSNVLACL 201
>SB_45370| Best HMM Match : Flagellin_IN (HMM E-Value=6.9)
Length = 226
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 133 LEVTLSKMEAIYIFCDIVDRKKCFALDEPSNVLACL 168
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 275 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 319 GGALKVALPKIEALYICCDIVDRTQCLSLGEPSNVLACL 357
>SB_19157| Best HMM Match : FLO_LFY (HMM E-Value=0.27)
Length = 560
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 400 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSNVLACL 435
>SB_14945| Best HMM Match : Herpes_US9 (HMM E-Value=1.7)
Length = 292
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC P L CL
Sbjct: 139 LEVTLSKIEAIYIFCDIVDRTKCFAFDEPSNVLACL 174
>SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 275 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
GG L++ ++ ++ +C++V R +C + P L CL
Sbjct: 130 GGALKVTLPKIEALYIFCDIVDRSQCLALDEPSNVLACL 168
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 266 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 159
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 8 LEVTLPKIEAIYVFCDIVDRSKCLALDEPSNVLACL 43
>SB_45146| Best HMM Match : DUF504 (HMM E-Value=9.8)
Length = 273
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 111 RLLFLNNYHYYTVFSVKRKTRGYFAARQTEIS 16
R+L L Y Y V RK RGY + TE++
Sbjct: 136 RVLKLRGYRSYESTEVTRKLRGYRSYESTEVT 167
>SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 305 FKQISQAYEVLSNPDKRRIYD 367
F +++A+E+LSN KRR YD
Sbjct: 109 FTCLTKAHEILSNRTKRRAYD 129
>SB_33267| Best HMM Match : F5_F8_type_C (HMM E-Value=3.4e-10)
Length = 1292
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 586 TDHVLLKRQFSDCATVQLLQC 524
T HV K FS CA QLL C
Sbjct: 740 TTHVAQKLNFSRCANAQLLTC 760
>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 476 VYLH*IHLQRTCQRDPLVKKIHHHYHPLPLMLV 378
VYL + + +T Q P++ HHYH + ++++
Sbjct: 14 VYLKTVIMSKTKQPTPVLHLFCHHYHHISVIII 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,560,138
Number of Sequences: 59808
Number of extensions: 309264
Number of successful extensions: 881
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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