Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m12
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.38 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.38 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.38 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.66 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.2  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   6.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   8.2  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 445 ISAMRLHKICTGISDPYLYCQLA 377
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 445 ISAMRLHKICTGISDPYLYCQLA 377
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 445 ISAMRLHKICTGISDPYLYCQLA 377
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 141 GRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQ 242
           G+LY  +    ++N       +LRGT  A++AAQ
Sbjct: 10  GQLYGAQIPAMSMNVKAAEHPSLRGTPLAMLAAQ 43


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -1

Query: 538 YTQGPASSSYAISIILQPRGLISAFWV*T*EISAMRLHKICTGISD 401
           YT+  A   YAI +IL  R L+S     + + +A  L  I   +SD
Sbjct: 178 YTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSD 223


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 395 LVLPVGSLVASSLYLRPAISNH 330
           L+LP+  L      ++ AISNH
Sbjct: 57  LILPIYGLSTKPKIMQGAISNH 78


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 492 SMMLIAYDDEAGPCVYKTDPSGYY 563
           + +L+ Y +E    V K DP G Y
Sbjct: 101 TFVLLNYRNEWNQLVAKYDPDGIY 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,683
Number of Sequences: 336
Number of extensions: 2855
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)