Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m12
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 218 2e-57
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 130 6e-31
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 118 2e-27
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 104 4e-23
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 94 6e-20
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 86 2e-17
U23169-6|AAC46695.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 28 6.0
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 28 6.0
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 8.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 8.0
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 218 bits (533), Expect = 2e-57
Identities = 96/171 (56%), Positives = 133/171 (77%)
Frame = +3
Query: 84 MARESSAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRL 263
M+R SSAGFDRHITIFSPEGR+YQVEYA KAIN LT+VA++G DAAV+A Q++VPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 264 LDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIAD 443
+ +VT ++ ++ +GC GMI D++ Q++RA+ EAA+W+YK G ++P +L +++AD
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMAD 120
Query: 444 ISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAK 596
++Q YTQNAEMR LGC+++ I+YDDE GP VY+ DP+GYY K V+ G K
Sbjct: 121 LNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVK 171
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 130 bits (315), Expect = 6e-31
Identities = 66/163 (40%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Frame = +3
Query: 108 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTH 287
+D TIFSPEGRLYQVEYA++AI+ G T + + ++ VVAA+RK +LLD +T
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAG-TCLGILSSEGIVVAAERKNVHKLLDDSVMTE 63
Query: 288 -LFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQ 464
++ L+D I C + G+ AD+ + R+ AA+++ YG E+PV L + + + Q YTQ
Sbjct: 64 KVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQ 123
Query: 465 NAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGA 593
RP G S++ I +D G +Y++DPSG Y +KA G+
Sbjct: 124 IGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGS 166
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 118 bits (285), Expect = 2e-27
Identities = 60/161 (37%), Positives = 93/161 (57%)
Frame = +3
Query: 108 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTH 287
+DR ITIFSP+G L+QVEYA +A+ +G T+V +RG D V+ ++K L D ++
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGS-TAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 288 LFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 467
+ + D + G+ AD+R V RAR E +++ + V + R IA+ Q +TQ+
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQS 122
Query: 468 AEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAG 590
RP G SM++ +D + P ++KT+PSG Y Y A A G
Sbjct: 123 PGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATG 163
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 108 bits (260), Expect = 3e-24
Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Frame = +3
Query: 120 ITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFAL 299
+T FSP G+L Q+EYAL A+ + G SV LR D V+A + V L D +
Sbjct: 9 LTTFSPSGKLMQIEYALNAV-KNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVE--QI 64
Query: 300 TDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMR 479
+ IGCV +GM D R V++AR A ++ YG E+P L IA + Q YTQ+ +R
Sbjct: 65 SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVR 124
Query: 480 PLGCSMMLIAYDDEAG-PCVYKTDPSGYYCSYKAVAAGAKTVD 605
P G S+++ +D G P +++ DPSG Y ++KA A G V+
Sbjct: 125 PFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVN 167
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 104 bits (250), Expect = 4e-23
Identities = 58/171 (33%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Frame = +3
Query: 108 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTH 287
+DR + FSPEGRL+QVEYA++A+ G TS+ ++ ++ ++AA+++ +L+ ++
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGS-TSIGIKTSEGVLLAAEKRSTSKLMVNDAIEK 66
Query: 288 LFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 467
+ + IG G+IADSR+ V+RA+ EA N+ + Y +I V + + +A+++ + +
Sbjct: 67 ISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDD 126
Query: 468 ---AEM-RPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDG 608
A M RP G +M+ D E G ++ DPSG + KA + GA + DG
Sbjct: 127 DVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAAS-DG 175
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 94.3 bits (224), Expect = 6e-20
Identities = 48/162 (29%), Positives = 82/162 (50%)
Frame = +3
Query: 105 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVT 284
G+D + FSP+GR++QVEYA KA++ G T +A+RG + VV A + + +L +
Sbjct: 7 GYDLAASTFSPDGRIFQVEYAQKAVDNAG-TMIAIRGKNGVVVVADKLISSKLYTDNANP 65
Query: 285 HLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQ 464
+F + D +G + G D + A EA W Y +P+ + +A+ ++T
Sbjct: 66 RMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTL 125
Query: 465 NAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAG 590
RP G ++++ + G ++ +PSG YKA A G
Sbjct: 126 GIS-RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVG 166
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 85.8 bits (203), Expect = 2e-17
Identities = 46/164 (28%), Positives = 86/164 (52%)
Frame = +3
Query: 108 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTH 287
+D +T++SP+GRL+QVEYA++A+ QG T V ++ AV+ A ++ + L
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSAT-VGIKSETHAVIVALKRAQNDLSS--HQKK 62
Query: 288 LFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 467
++ + G + G+++D R + + E ++W++ Y +P+ L + Q TQ
Sbjct: 63 VYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQY 122
Query: 468 AEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKT 599
RP G +++ YD + G + +TDPS S + GA++
Sbjct: 123 YGRRPFGVGILIAGYDKD-GAHIIQTDPSAEVVSMHGTSIGARS 165
>U23169-6|AAC46695.1| 393|Caenorhabditis elegans Hypothetical
protein C29H12.2 protein.
Length = 393
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 132 SPEGRLYQVEYALKAINQGGLTSVALRGTDAAV 230
+PEGRL V YA K I + ++AL GT ++
Sbjct: 250 NPEGRLEDVFYAWKEITEEPTIALALSGTVVSI 282
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +2
Query: 350 SSTTSSLRGC--QLAVQVWV*DT--CAYLMQTHS*YLSSLHPKCRDET 481
++ +SSL C +V+VW +T CA +TH+ +++++HP R T
Sbjct: 90 TTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVT 137
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/88 (15%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 189 GLTSVALRGTDAAVVAAQRKVPDRLLD-PVSVTHLFALTDRIGCVMTGMIADSRSQVQRA 365
G T VA+ G + +A+ ++ +++ + +TD++ + G +D+R+ +++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 366 RYEAANWQYKYGSEIPVHILCRRIADIS 449
+ ++ + I +L I++++
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLA 95
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +3
Query: 138 EGRLYQVEYA-------LKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLD 269
+ RL ++ YA L+ + +GG T V L+G + AQ+ + D ++D
Sbjct: 558 KARLLEIHYATGCHLIFLEEVKRGGYTYVELKGDPEHIKNAQKMIDDMVID 608
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 611 VSINCLSTSSYSFIGAVVAGGVCFVHTG 528
+S+NC S ++ + G+V+ C + TG
Sbjct: 1229 ISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 611 VSINCLSTSSYSFIGAVVAGGVCFVHTG 528
+S+NC S ++ + G+V+ C + TG
Sbjct: 1229 ISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 611 VSINCLSTSSYSFIGAVVAGGVCFVHTG 528
+S+NC S ++ + G+V+ C + TG
Sbjct: 1229 ISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 611 VSINCLSTSSYSFIGAVVAGGVCFVHTG 528
+S+NC S ++ + G+V+ C + TG
Sbjct: 1229 ISLNCSSDGTWRYTGSVINSVSCIISTG 1256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,256,045
Number of Sequences: 27780
Number of extensions: 261778
Number of successful extensions: 634
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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