Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m11
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.1  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 34  C*TRVFQFKSYFYKILWPYLVYLNFEASINLL 129
           C + VF F  ++Y +       LNF  SI  +
Sbjct: 102 CVSNVFDFVHFYYPVATMSFYVLNFFGSIQFI 133


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 497 FVIFRNLQ*STCRFVKSICDDICVLCQ 417
           +V+   L+      +KS+C D+C+L +
Sbjct: 177 YVMTGQLKAQNSNLLKSVCADLCLLSE 203


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 217 HAWIWLVWLLSQAWI 231


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 450 HAWIWLVWLLSQAWI 464


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 536 HFWQWLFWITSHFFV 492
           H W WL W+ S  ++
Sbjct: 450 HAWIWLVWLLSQAWI 464


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 230 LSIGFNSYLFVLSHFDFW 177
           L + FNSY++  +H  F+
Sbjct: 60  LHVCFNSYMYAFTHIFFF 77


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 73   KILWPYLVYLNF 108
            KI+W +LVY++F
Sbjct: 989  KIVWLHLVYISF 1000


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 555 LYEAPRSFLAVAVLDYVSLFCYL 487
           +Y+AP   L + +  Y+S+ CY+
Sbjct: 127 VYQAPVLQLFLYIFTYLSVTCYV 149


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 73  KILWPYLVYLNF 108
           KI+W +LVY++F
Sbjct: 270 KIVWLHLVYISF 281


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 221 GFNSYLFVLSHF 186
           GF ++LFVLS F
Sbjct: 233 GFQNFLFVLSTF 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,984
Number of Sequences: 336
Number of extensions: 3164
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)