Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m10
         (594 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0559 + 24972403-24972445,24972590-24972680,24973911-249740...    29   2.1  
03_02_0333 + 7566644-7566995,7567432-7567463,7568301-7568457,756...    29   2.1  
03_01_0512 - 3849275-3849333,3849429-3849531,3849610-3849654,384...    29   2.1  
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133...    28   6.5  
07_03_0950 + 22828787-22828982,22829091-22829164,22829512-228295...    27   8.5  

>11_06_0559 +
           24972403-24972445,24972590-24972680,24973911-24974030,
           24974121-24974237,24974745-24974840,24975317-24975610,
           24977153-24977258,24977365-24977566,24977671-24977792
          Length = 396

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = +2

Query: 17  CHRCCHV---FVNFRHFDFSFNFKR 82
           CH+C HV   F NF H++F+   K+
Sbjct: 298 CHQCFHVESYFQNFHHYNFNVKIKK 322


>03_02_0333 +
           7566644-7566995,7567432-7567463,7568301-7568457,
           7568568-7568740,7568872-7568973,7569053-7569199,
           7569274-7570248
          Length = 645

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 166 GQHQSTAQLSRQPSHPRHVK*PQNRQHWI 252
           G  Q+TA L+R  SH  HV    NR+ W+
Sbjct: 60  GLPQATASLARSVSHSSHVNHQANRRCWL 88


>03_01_0512 -
           3849275-3849333,3849429-3849531,3849610-3849654,
           3849876-3849974,3850078-3850146,3850251-3850310,
           3850540-3850633,3850875-3850949,3851101-3851219,
           3851433-3851600,3852743-3852928
          Length = 358

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +3

Query: 312 NYPKENSEIISNLARAIDKLPVAPHY---LQETLKHE--PKYVLEAAKFEPKYEIEPY 470
           +Y +EN +++  L    D + +A HY   L++ ++H+   +YVLE+   +  ++   Y
Sbjct: 143 DYLEENQDLLDVLMSGYDNMDIAIHYSAILRDCIRHQVAARYVLESQHMKKFFDYIQY 200


>01_06_0042 -
           25911662-25911736,25912409-25912607,25913275-25913348,
           25913431-25913580,25913666-25913821,25915378-25915464,
           25915706-25915765,25915878-25916414,25917292-25917585
          Length = 543

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 372 PVAPHYLQETLKHEPKYVLEAAKFEPKYEIEPYYTG 479
           P+A H L+  L  +PK    AA+   K   +PY+TG
Sbjct: 356 PMALHLLERLLAFDPKDRPTAAELCVKALTDPYFTG 391


>07_03_0950 +
           22828787-22828982,22829091-22829164,22829512-22829570,
           22830148-22830487,22830623-22833376
          Length = 1140

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 38  FVNFRHFDFSFNFKRGKFPCHR 103
           F  FR FDFS + KRGK+  HR
Sbjct: 97  FYYFR-FDFSISGKRGKYEIHR 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,248,530
Number of Sequences: 37544
Number of extensions: 262882
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)