Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m08
(494 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a pr... 177 1e-44
BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a ... 177 1e-44
AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A ... 177 1e-44
BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for IM... 177 2e-44
BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a ... 171 9e-43
AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a ... 131 1e-30
AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a ... 46 1e-04
AL671986-7|CAI13027.1| 297|Homo sapiens chromosome 1 open readi... 31 2.2
AL671986-5|CAI13025.1| 319|Homo sapiens chromosome 1 open readi... 31 2.2
AL671986-2|CAI13022.1| 227|Homo sapiens chromosome 1 open readi... 31 2.2
AL671986-1|CAI13021.1| 550|Homo sapiens chromosome 1 open readi... 31 2.2
AL162430-8|CAI13137.1| 297|Homo sapiens chromosome 1 open readi... 31 2.2
AL162430-6|CAI13135.1| 319|Homo sapiens chromosome 1 open readi... 31 2.2
AL162430-3|CAI13132.1| 227|Homo sapiens chromosome 1 open readi... 31 2.2
AL162430-2|CAI13131.1| 550|Homo sapiens chromosome 1 open readi... 31 2.2
AF007170-1|AAC39582.1| 574|Homo sapiens unknown protein. 31 2.2
>U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 177 bits (432), Expect = 1e-44
Identities = 81/148 (54%), Positives = 99/148 (66%)
Frame = +2
Query: 32 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDXYHPGYFGKLGMRN 211
M + +KTRKLRGHVS NAGG HHHRIN D YHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 212 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAGYYXLLGKGKLPKQ 391
+H ++N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++GYY +LGKGKLPKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 392 PVIVXXXXXXXXXXXXIXDVGGACVLSA 475
PVIV I VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 177 bits (432), Expect = 1e-44
Identities = 81/148 (54%), Positives = 99/148 (66%)
Frame = +2
Query: 32 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDXYHPGYFGKLGMRN 211
M + +KTRKLRGHVS NAGG HHHRIN D YHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 212 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAGYYXLLGKGKLPKQ 391
+H ++N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++GYY +LGKGKLPKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 392 PVIVXXXXXXXXXXXXIXDVGGACVLSA 475
PVIV I VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A
protein.
Length = 148
Score = 177 bits (432), Expect = 1e-44
Identities = 81/148 (54%), Positives = 99/148 (66%)
Frame = +2
Query: 32 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDXYHPGYFGKLGMRN 211
M + +KTRKLRGHVS NAGG HHHRIN D YHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 212 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAGYYXLLGKGKLPKQ 391
+H ++N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++GYY +LGKGKLPKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 392 PVIVXXXXXXXXXXXXIXDVGGACVLSA 475
PVIV I VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for
IMAGE:3543815) protein.
Length = 147
Score = 177 bits (430), Expect = 2e-44
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 47 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDXYHPGYFGKLGMRNFHFRK 226
+KTRKLRGHVS NAGG HHHRIN D YHPGYFGK+GM+++H ++
Sbjct: 5 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64
Query: 227 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAGYYXLLGKGKLPKQPVIVX 406
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++GYY +LGKGKLPKQPVIV
Sbjct: 65 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 124
Query: 407 XXXXXXXXXXXIXDVGGACVLSA 475
I VGGACVL A
Sbjct: 125 AKFFSRRAEEKIKSVGGACVLVA 147
>BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 171 bits (417), Expect = 9e-43
Identities = 79/148 (53%), Positives = 98/148 (66%)
Frame = +2
Query: 32 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDXYHPGYFGKLGMRN 211
M + +KTRKLRGHVS NAGG HHHRIN D YHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 212 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAGYYXLLGKGKLPKQ 391
++ ++N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++GYY +LGKGKL KQ
Sbjct: 61 YNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQ 120
Query: 392 PVIVXXXXXXXXXXXXIXDVGGACVLSA 475
PVIV I VGGACVL A
Sbjct: 121 PVIVKAKLFSRRAEEKIKSVGGACVLVA 148
>AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a
protein.
Length = 106
Score = 131 bits (316), Expect = 1e-30
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = +2
Query: 32 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDXYHPGYFGKLGMRN 211
M + +KTRKLRGHVS NAGG HHHRIN D YHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 212 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 349
+H ++N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a
protein.
Length = 34
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 248 LNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 349
+NLDKLWTLVSEQTR+ A G P+I++V++
Sbjct: 1 VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34
>AL671986-7|CAI13027.1| 297|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 297
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 119 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 178
Query: 143 HHQHY 129
+H H+
Sbjct: 179 NHPHF 183
>AL671986-5|CAI13025.1| 319|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 319
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 120 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 179
Query: 143 HHQHY 129
+H H+
Sbjct: 180 NHPHF 184
>AL671986-2|CAI13022.1| 227|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 227
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 92 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 151
Query: 143 HHQHY 129
+H H+
Sbjct: 152 NHPHF 156
>AL671986-1|CAI13021.1| 550|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 550
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 92 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 151
Query: 143 HHQHY 129
+H H+
Sbjct: 152 NHPHF 156
>AL162430-8|CAI13137.1| 297|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 297
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 119 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 178
Query: 143 HHQHY 129
+H H+
Sbjct: 179 NHPHF 183
>AL162430-6|CAI13135.1| 319|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 319
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 120 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 179
Query: 143 HHQHY 129
+H H+
Sbjct: 180 NHPHF 184
>AL162430-3|CAI13132.1| 227|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 227
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 92 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 151
Query: 143 HHQHY 129
+H H+
Sbjct: 152 NHPHF 156
>AL162430-2|CAI13131.1| 550|Homo sapiens chromosome 1 open reading
frame 34 protein.
Length = 550
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 92 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 151
Query: 143 HHQHY 129
+H H+
Sbjct: 152 NHPHF 156
>AF007170-1|AAC39582.1| 574|Homo sapiens unknown protein.
Length = 574
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -1
Query: 311 EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNF----SYQVCQSIQDGTXPC*FCDGA 144
E++H + L+ +A L+ D N SF G SYQ + + +C G
Sbjct: 116 EEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGE 175
Query: 143 HHQHY 129
+H H+
Sbjct: 176 NHPHF 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,719,221
Number of Sequences: 237096
Number of extensions: 1422312
Number of successful extensions: 2615
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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