Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m06
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...    35   0.062
AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical ...    33   0.14 
AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical ...    33   0.14 
AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical ...    33   0.19 
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...    32   0.44 
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    31   0.58 
AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    30   1.3  
Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U76402-1|AAB39734.1|  777|Caenorhabditis elegans degenerin protein.    27   9.4  
U40798-3|AAA81473.2|  777|Caenorhabditis elegans Uncoordinated p...    27   9.4  
AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score = 34.7 bits (76), Expect = 0.062
 Identities = 12/38 (31%), Positives = 26/38 (68%)
 Frame = +3

Query: 567 ENNEDFHLNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           +++ + ++N ++++++  Y  E HTV T+DGY L + R
Sbjct: 26  DDDPELNMNTSQIIERWGYKAEVHTVTTEDGYILQMQR 63


>AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK6.7b protein.
          Length = 351

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           + H+   +++++  YP   +TVATDDGY L + R
Sbjct: 24  ELHMTTPQIIERWGYPAMIYTVATDDGYILEMHR 57


>AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK6.7a protein.
          Length = 403

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           + H+   +++++  YP   +TVATDDGY L + R
Sbjct: 24  ELHMTTPQIIERWGYPAMIYTVATDDGYILEMHR 57


>AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical
           protein R11G11.14 protein.
          Length = 404

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +3

Query: 546 AISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           A+     +++ + H+   +++++  YP   ++V TDDGY L + R
Sbjct: 14  AVHNVHAKSDPELHMTTPQIIERWGYPAMIYSVTTDDGYILELHR 58


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 588 LNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           L+A + +  + Y VE+H V TDDGY + + R
Sbjct: 23  LDAADTISHYGYTVEKHYVTTDDGYTVQLQR 53


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 588 LNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           ++  E++    YPVE H V T DGY LT+ R
Sbjct: 275 MDVPEIITHWGYPVETHKVVTVDGYILTLHR 305


>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +3

Query: 294 EDETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMASGPNSPVQ-TEQ 464
           E+E K++HD++ +   + ++ ++ ++ KE    +  GD + W ++ +A    S     E 
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDGLTWADLVVADHLYSLTNIKEL 183

Query: 465 DIEDIFGDSLKTW 503
           D ED    +LK +
Sbjct: 184 DPEDPIHLNLKKY 196


>Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical
           protein F21H7.1 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 297 DETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
           +E KQ+HDK+ +   + ++ ++ ++ KE       GD + W ++ +A
Sbjct: 125 EEVKQIHDKVYIPAKNLMFKILTRILKENKSGFLVGDGLTWADLVVA 171


>U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical
           protein K04A8.5 protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 549 ISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDGYHLTVLR 680
           +S   +  + +F+L+  EL+K   Y VE +   T DG+ L + R
Sbjct: 21  LSNYSKSVDLEFYLDTPELIKSWGYSVEIYNTTTKDGFILELHR 64


>Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical
           protein C47B2.2a protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
 Frame = +3

Query: 510 FTD-DAKKNTFHDAISETQRENNEDFHLNATELLK------KHQYPVEEHTVATDDGY 662
           F+D ++K   FH      +  N+ DF  NA  L++       +  P  EHTV T  G+
Sbjct: 114 FSDFESKFRYFHKFPGPKRSTNHSDFVFNADRLMRLVIEECLNHLPFTEHTVTTPTGF 171


>Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical
           protein C34F6.5 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 414 KNIEMASGPNSP----VQTEQDIEDIFGDSLKTWDHFTDDAKKN 533
           +N+E A+GP+ P    VQ EQD+E+I  D  +  D   +D  +N
Sbjct: 37  RNMEHAAGPSPPVEQGVQLEQDLEEII-DIHEVDDEEEEDEDQN 79


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
           protein R08B4.1b protein.
          Length = 1160

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
 Frame = +3

Query: 342 SPVYSVIMKLK-----KEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWD 506
           SP YS   K+K     +  DINH    +W   +    P   +  E   E++     KT  
Sbjct: 14  SPHYSEANKIKLKSSGRSADINHDSPCIWNKTQSWVHPYQSITVECCDEELSKLIHKTIL 73

Query: 507 HFTDDAKKNTFHDAISETQRENNEDFHLNATELLKKHQYPVEEH 638
              ++AK       I   QR +   +H++   ++ +  + +  H
Sbjct: 74  DAGNNAKLGNLAKFI---QRRSQLFYHMSFETIVSRENFAISTH 114


>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
           protein R08B4.1a protein.
          Length = 1137

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
 Frame = +3

Query: 342 SPVYSVIMKLK-----KEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWD 506
           SP YS   K+K     +  DINH    +W   +    P   +  E   E++     KT  
Sbjct: 14  SPHYSEANKIKLKSSGRSADINHDSPCIWNKTQSWVHPYQSITVECCDEELSKLIHKTIL 73

Query: 507 HFTDDAKKNTFHDAISETQRENNEDFHLNATELLKKHQYPVEEH 638
              ++AK       I   QR +   +H++   ++ +  + +  H
Sbjct: 74  DAGNNAKLGNLAKFI---QRRSQLFYHMSFETIVSRENFAISTH 114


>U76402-1|AAB39734.1|  777|Caenorhabditis elegans degenerin protein.
          Length = 777

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
 Frame = +3

Query: 321 KMNVKHHSPVYSVIMKLKKEVDINHGDSVVW---KNIEMASGPNSPVQTEQDIEDIFG-D 488
           K   KH+SP+  +   +     ++  D + W    N  + S    P     + E+ FG  
Sbjct: 322 KQIAKHNSPLPCLCQSISHHCMVHPKDEIRWWNPNNYTVYSVTEPPTTEITETEEAFGLS 381

Query: 489 SLKTWDHFTDDAKKNTFHDAISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDGYHL 668
            LK     T   K+N     ++   RE   +      E + +  +  ++ ++  D   H+
Sbjct: 382 DLKDAGAITTQTKENLIF-LVAALPRETRRNLSYTLNEFVLRCSFNSKDCSMERDFKLHV 440


>U40798-3|AAA81473.2|  777|Caenorhabditis elegans Uncoordinated
           protein 8 protein.
          Length = 777

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
 Frame = +3

Query: 321 KMNVKHHSPVYSVIMKLKKEVDINHGDSVVW---KNIEMASGPNSPVQTEQDIEDIFG-D 488
           K   KH+SP+  +   +     ++  D + W    N  + S    P     + E+ FG  
Sbjct: 322 KQIAKHNSPLPCLCQSISHHCMVHPKDEIRWWNPNNYTVYSVTEPPTTEITETEEAFGLS 381

Query: 489 SLKTWDHFTDDAKKNTFHDAISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDGYHL 668
            LK     T   K+N     ++   RE   +      E + +  +  ++ ++  D   H+
Sbjct: 382 DLKDAGAITTQTKENLIF-LVAALPRETRRNLSYTLNEFVLRCSFNSKDCSMERDFKLHV 440


>AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical
           protein Y19D10B.2 protein.
          Length = 534

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 408 VWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTD 518
           V+ N+E+  GPNS + T + IE IFG  +    + TD
Sbjct: 135 VFGNVEI--GPNSNLDTMKSIEIIFGSLIINETNLTD 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,369,690
Number of Sequences: 27780
Number of extensions: 244505
Number of successful extensions: 747
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)